Silkworm Genome Informatics Database

Gene

KWMTBOMO04033

Pre Gene Modal

BGIBMGA010107

Annotation

PREDICTED:_another_transcription_unit_protein_[Amyelois_transitella]

Location

Bomo_Chr7(-):9407163-9416680 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.169

CDS

ATGGCGCCAATAGCAAATAAATCACTGCAAGACACAGACTCTGGATCTGATTCCGAAAGTGGCTCCAGTCGTAGTGGCAGTCGCAGTAAAAGCCGAAGTCCTGCACCCTCTGGCAAAGAAGGCAGTCAGTCGAGGTCCGTGTCTCGTAGCCCACCTCGGTCAGGCAGTGAATCACCAAAATCGCATCACTCTGCCCGTTCTAAAAGATCATCAAATGGTTCACGAAGTAAATCAAACTCTCCAGCGGGATCTAATAGATCAGGCTCAGCTCAGAGCAATAAGTCAGGCTCATCGAGTCCCAAGTCTCAAGCTTCAAGACGGCAATCGAGATCTAGAAGTGGCTCAGCCAGTGGCCGGTCAAGGTCGGGTAGTCCAAAGTCTGGGGCACAGACTCCAAGATCTCGATCTCATAGCCCTAAATCCAGATCACAAAGTCCAAAGTCTAGGTCCCAAAGTCCTAAATCACAAACAGCCAAAGGCCGTTCCCGCTCCAAATCAGCTACTGGTAGTCCAAGAAAATCAAGATCAAGGAGTAAGTCATTCCAGTCAAAGAGCCCAGTTCAAAGGCAGGATGTTCAAGACAGCAGATCCAACTCACCTAATCTAATGATTGATGATGAACAATCAAAAGGGAGATCTAGGAGTAGATCAAGGTCAGGTTCGAGGCGTTCAAGATCTAAGTCACGAAGTAAATCCAAATCAAAAAGCCGTTCACGATCACACTCAAAAAGTTCGAATGCTTCAGCAGAGATAGGCGAGAAGAAAAAACGCGCGGTCCTCTCGGATTCCGAAAGCGATGGCGGTGAAAAGACTTCCAAAAGAAAGAAAGAGACAGCGGACAGCGGGTCTGATACCAGCGGAAAGCCTAAAAAGAAGACGAAGATATTAGATGATGGTTCTGATGTAGAAAACGAAAATAAGGCAGATAATGTGACCGCTGACGCGTTGTTCGGTGACGCGTCAGACATAAGCACAGAAGACGAAGAACAGAAAGATCAAGACAAGCGTTCCGATCGGTCGCGTTCGAGAAGTAGGTCTGAAGATAGACGATCCGAAGATCGTAGAAGTGGTGATGAGCCGGAAGTTCGCGAAAAGCCGGAAGAGGAAGAGGAAATCGAGGTTCCGGAGACGAGGATCGACGTGGACATGCCCAAGATATGGACGGAATTGGGAAAGGAATTGCACTTTGTCAAACTACCCAACTTTTTGTCGGTCGATACGAGGCCTTATGATCCTAACACGTACGAAGATGAAATCGATGAAGAGGAGACCCTGGATGAGGAAGGTCGTGCCAGGTTAAAGCTGAAAGTCGAGAACACGATACGATGGAGGACGGTGTTCGACAAAGAAGGCAACGCGGTTAAAGAGTCCAACGCGCGCATGGTGAAGTGGTCGGACGGCAGCATGTCGCTGCACCTCGGCGCCGAGATATTCGACGTGTACAAACAGCCTTTGCACGGTGACCACAACCACCTATTCGTCCGCCAAGGCACCGGGCTGCAGGGCCAGGCGGTGTTCCGCACGAAGCTCTCGTTCAGGCCGCACTCGACGGAGTCGTTCACCCATCGCAAGATGACGCTGTCGCTGGCGGACCGCTCCAGCAAGACGTCCGCCATCAAGATCCTGTCGCAGGTCGGGGCCGATCCCGACGCCGACAGGAAGTATCAGCTCAAGAAAGAGGAGATGGAGCTCCGCGCGGCCATGCGGTCCCGCGCTTCGACGCGGCCCAAGCGACGAGCGGGAGCGGCTAGAGCGCGACACGACGACTCCGACGACGACGGCGCCGTCTCACTGCAGGCTATTAAGAACAAATACAAACAGGGACAGAAAGCGTCGGCCGGAGCGGCGATATACTCGTCAGAATCGGACGCTTCCGACGTAGAGACGCGTCGCGCTCGTCGCTTGGACCGCGCCAAAGCGCTCAAAGACTCGGACGACGAGGGAAGCGACGCGGGCGGCGCCGGCGACTCGCAACCCAGAAGCGGCAGCGGCAGCGGAAGCGGAAGCGCCAGCGGGAGCGAGTAG

Protein

MAPIANKSLQDTDSGSDSESGSSRSGSRSKSRSPAPSGKEGSQSRSVSRSPPRSGSESPKSHHSARSKRSSNGSRSKSNSPAGSNRSGSAQSNKSGSSSPKSQASRRQSRSRSGSASGRSRSGSPKSGAQTPRSRSHSPKSRSQSPKSRSQSPKSQTAKGRSRSKSATGSPRKSRSRSKSFQSKSPVQRQDVQDSRSNSPNLMIDDEQSKGRSRSRSRSGSRRSRSKSRSKSKSKSRSRSHSKSSNASAEIGEKKKRAVLSDSESDGGEKTSKRKKETADSGSDTSGKPKKKTKILDDGSDVENENKADNVTADALFGDASDISTEDEEQKDQDKRSDRSRSRSRSEDRRSEDRRSGDEPEVREKPEEEEEIEVPETRIDVDMPKIWTELGKELHFVKLPNFLSVDTRPYDPNTYEDEIDEEETLDEEGRARLKLKVENTIRWRTVFDKEGNAVKESNARMVKWSDGSMSLHLGAEIFDVYKQPLHGDHNHLFVRQGTGLQGQAVFRTKLSFRPHSTESFTHRKMTLSLADRSSKTSAIKILSQVGADPDADRKYQLKKEEMELRAAMRSRASTRPKRRAGAARARHDDSDDDGAVSLQAIKNKYKQGQKASAGAAIYSSESDASDVETRRARRLDRAKALKDSDDEGSDAGGAGDSQPRSGSGSGSGSASGSE

Uniprot

NA

ProteinModelPortal

NA

PDB

6GMH E-value=4.19037e-55, Score=546

KEGG

101738096 K15177 RNA polymerase-associated protein LEO1 | (RefSeq) another transcription unit protein

GO

GO:0006368 GO:0016570 GO:0016593 GO:0005524 GO:0007179 GO:0006811 GO:0006032 GO:0016021 GO:0004672 GO:0048384

Length:

674

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00023

outside

1 - 674

Pi

209.906849

Theta

167.798864

Tajima's D

-1.164487

CLR

104.075763

CSRT

0.108794560271986

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics