SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04030  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA010275
Annotation
Uncharacterized_protein_OBRU01_03354_[Operophtera_brumata]
Location
Bomo_Chr7(+):9364461-9389566      View in EpiBrowser
Location in the cell
PlasmaMembrane   Reliability : 1.928
 

Sequence

CDS
ATGCGGTTGTCTCATTGGATGGCTTTGGCCGTCCTTTTCGGAGGTACGGTAACCGGTGATATTGTCAACGAACTACCTCCAGAAGAGTTCGACGTCAAAATCGGCGAAACAGTAGCCGTTTCCATCGCATCAAATGATGGATTCACTAATACCGAGTGTCTAATTCAGACTCCAGATGGCGGGCCACATTCTCTTCAAGAACTTGACTTTATTGATGTTATAACCGAAGCGGGGGTTGATTGCAGCATTAAGATTAAAGTAACCGAAGAGATAGAAGGCGCCTGGACTCTTATTAGCCGAGCCACGTCGTTCGGTAGTCCTGTGAAGAGAACATTACCCTTCACTATCAATATAGTTCCAGGTGAACACGATGAATCTGATGATGAAAAAACAGAATCAGAAGAAGAAAAAGAAAAAGAAAAAGAATCAGAAGAAAAACAAGAAACGGATGAAGACGATGGCAAAACTATATGGTTAACTGAAATCAGACGCTTCACGAGAACTGAACAAATCGTTGATGTGTCATTACCGAACATTGGATACGATGAAATATGCACTGTCATTACTCCTGACAGAAAAACCATTACGGCCGCAGAAATAGAAATTCCAGGAGTTAAAGTACAAAGTAAAAGCGTTTTTGTTTCGTGTAGAATCAGTATCGGGCCGCTGAAGTCAAATTTACTGGGCAAGTGGACTCTCTGTGGAAGACGAGATGGTGCTGAGGAGCGAAGATGTCAGGTCGTCACTATTGAATGGAACAGTGAGAACGCACCCCATGCGTTATGGGACTCCAGAACTCAGCCTCTTTTCAACCATCCCGTCAATCTCAATGGAATTTTGACACCGGTCGTTATAGGTTCAGGATCTTTGTTAACGTGCCATATTGTTACGCCAAATGGTGAAGATTTAGTCGTCTTACCAGAGACGAAATACCCTGGCATCATCCGCGCAGAATCCGGTACAACGGGTTGTAGTATCGCAATTGGTCCCATAACACAGGATATGTTGGGACAATGGGAACTTTATGGAATGTTTAGATCAGTGCTAGGACTGAATGAAGTCCGTTTGCCTATGAACTTTGAGTTGTATGATACTGACAACCCTTACAACCAAGCTTACAATTTAACTGTTTTGGATGCAAAAAGACATGTGATCAATTTGGGTTCTACAATATCAGTAGAAGTTAGCGGTCACGGAACAATGGACAACTGTGAATTTGTTGCTCCTTCAGGGCAAGCTTATCAAAGTACTGGCAAGAACAATTTCGAAGGAGTTCAGTTTGTAAATGTAGACGGCATTACAGCTTGCCGTATCTCGATCGGTCCCATTACCGAAGTAATGCTTGGGAAATGGCAAATTGTCGGGAAATTCAATGATGGAAATATATTTAACGAGAGACAATTGCCTTTTGAAGTCATACGCGAAGATCCTGCAAATCCTATTGACGACGTTGACAGAATTGTAACCACGATTGACGATAGGAAATACGATACTGAAATCGGCGCGACTCACGAGATCATCATAAATCGTGGAGACTTCATTAAAAGTGAATCCTGTCAGATCAGGACACCTTCGGGAAGACAGTACACCTTAATGGATGGCTTCAACCTACAAGGGATAGAGATTATAGAAGATACGAATGTGGAATGTGGAATAAGAATGACTGTGCTATCTGAAGATATGGTCGGCGAATGGGTGCTAATTTCAAAAGTTACGATGCTCTCTGATCCTATGGAAAGAAGACTCGTGTTTAAAATTCACATTGAAGAGCGCGTCGAACCTAATTCTGCAAGCATTACAATAACTGAAGGCAACGATTTATACCTTAGACTGAAGAATCCAGTAGACAAACAAGACACCTGCAAACTCATTGCTCCTAACTCACGTGCTTTCGAAATAGATGAACCAAACGCGAGACTGTGTGGATTCTTGGCTAGAGCCGTTTCGGATCAGGATAGTGGAGAATGGGAAATACAATATGGAGATACAATTTTATACAGAGCTGTAATAAATGTTAATGTTGTCGAAAGAAGTACAATACAAGTGCAAGATTTAACAATAATTGAAGGTAGTAAGCTGATTACGGAAATCGGTCCAGATGATTTGGTGTTTTGTAAACTAGAAGATCCATTAGGCATGACCGTATATGAAGGTTTCGGCAGATGCGTGATCCGTGTCGATCGAGCGACAAGAAACCATAATGGCAAATGGAAGATGTCTATTGGATTACAAGGGCGTATTCTACTTGAAGAACTCACTTTTACAGTTCACGTTAGAAGTGCAGGATCCAGACAAGTACAGACTTCCGTGCGCAGGGAACGTCCTTCGGTGGTCATATCATGTTCGCTTACGAGCAACGTCGAAGTCCGCGCTTGTAAGTTCCGCGATCCCCGCGGCAAAGTCCTGATCGCTTCACGCGGAGTCGGAGAGGACAGATACGCTTACCACGGCTCCGAAGTGACCTACAAGTCCGACTTGTCCAGCCACGAGTGCGGGATCCGACTGACGAACCCTTCGGAGGAAGACCTGGGTCTGTGGCGCTGCGGCATGGAAACTGAAACCGAGACTCACTATGGCTTTCTACCGGTTATTTGTCCTTGGTTACTGGACACATCGGAAATCCAAGACAAGGTTGTCACTGAGCCAATCCTGAGTGCGGATACAAGTTACGTGTCGTCTCCTGAAGGTCAGGCCGTTGTGATGTCGTGCTCTGTGTCCGCTACGATACAATACTGTTACTTCAGGGCACAAAACGGAACAGTATTCAGTGTTACTCCTGGCGCCACCTCTACCTACACTGAGTATGTAGGCAATGGCTTCGCTGCCGGCGAGTGTGGAGTCAGGTTTGATGGCTTGTTGACGACTGATGGCGGTCGATGGAGTTGCCACGTGGGACTTTTGGACACTGAGCAGGAACAACGGGCGGAGATCACTCTTCATATTTTCGAGCAAATGAGAGTTAGGCATTACATCCATCCGCGCGGCCTGATGGTGGAAGCCGACGTTGAGACGCCTGAAGAGTTGGAGTACTGTAGATTCGTGCGCATAGACGGTCTAGGATTCACAAGTGAAAATGTACCGAACGGTTACCAGAGCATGAGTAATCTTCAGGAAGGTCTGTGCGCACTGTTGATGCGTGACCAGACAACGCTGAACCTTCACCCCTGGACTGTGGCCGCTAAGGTTCACGGGCAGACGGAAATAATGAGAACCAGCACCCAGAACTTGCTGTGGACCTTAAGCCAGAGGACCGCCACGGTCTATTCGATATACTTGTTCACCGTGGTGATGTTCATTCTGCTGGCGACGGTGCTGGTGGGAGTCAGCCTCGGCCCCAAGAAGAACAGGAAGTGGACGTACGACCGGGTCTCGCGTTTGAGTACCAATATCAGGAACAGCTTCCGGAAACAGAAACCCGTTGGCGGCGTTTAG
Protein
MRLSHWMALAVLFGGTVTGDIVNELPPEEFDVKIGETVAVSIASNDGFTNTECLIQTPDGGPHSLQELDFIDVITEAGVDCSIKIKVTEEIEGAWTLISRATSFGSPVKRTLPFTINIVPGEHDESDDEKTESEEEKEKEKESEEKQETDEDDGKTIWLTEIRRFTRTEQIVDVSLPNIGYDEICTVITPDRKTITAAEIEIPGVKVQSKSVFVSCRISIGPLKSNLLGKWTLCGRRDGAEERRCQVVTIEWNSENAPHALWDSRTQPLFNHPVNLNGILTPVVIGSGSLLTCHIVTPNGEDLVVLPETKYPGIIRAESGTTGCSIAIGPITQDMLGQWELYGMFRSVLGLNEVRLPMNFELYDTDNPYNQAYNLTVLDAKRHVINLGSTISVEVSGHGTMDNCEFVAPSGQAYQSTGKNNFEGVQFVNVDGITACRISIGPITEVMLGKWQIVGKFNDGNIFNERQLPFEVIREDPANPIDDVDRIVTTIDDRKYDTEIGATHEIIINRGDFIKSESCQIRTPSGRQYTLMDGFNLQGIEIIEDTNVECGIRMTVLSEDMVGEWVLISKVTMLSDPMERRLVFKIHIEERVEPNSASITITEGNDLYLRLKNPVDKQDTCKLIAPNSRAFEIDEPNARLCGFLARAVSDQDSGEWEIQYGDTILYRAVINVNVVERSTIQVQDLTIIEGSKLITEIGPDDLVFCKLEDPLGMTVYEGFGRCVIRVDRATRNHNGKWKMSIGLQGRILLEELTFTVHVRSAGSRQVQTSVRRERPSVVISCSLTSNVEVRACKFRDPRGKVLIASRGVGEDRYAYHGSEVTYKSDLSSHECGIRLTNPSEEDLGLWRCGMETETETHYGFLPVICPWLLDTSEIQDKVVTEPILSADTSYVSSPEGQAVVMSCSVSATIQYCYFRAQNGTVFSVTPGATSTYTEYVGNGFAAGECGVRFDGLLTTDGGRWSCHVGLLDTEQEQRAEITLHIFEQMRVRHYIHPRGLMVEADVETPEELEYCRFVRIDGLGFTSENVPNGYQSMSNLQEGLCALLMRDQTTLNLHPWTVAAKVHGQTEIMRTSTQNLLWTLSQRTATVYSIYLFTVVMFILLATVLVGVSLGPKKNRKWTYDRVSRLSTNIRNSFRKQKPVGGV

Summary

Uniprot
A0A0L7LR73   A0A2A4J868   A0A1E1W7Y9   A0A2W1BRE2  
Pubmed
26227816    28756777   
EMBL
JTDY01000283    KOB77914.1    NWSH01002496    PCG68161.1    GDQN01008083    JAT82971.1    + More
KZ149942    PZC76881.1   
Proteomes
UP000037510    UP000218220   
Pfam
PF08238   Sel1
Interpro
IPR003599   Ig_sub        + More
IPR013783   Ig-like_fold       
IPR036179   Ig-like_dom_sf       
IPR011990   TPR-like_helical_dom_sf       
IPR006597   Sel1-like       
SUPFAM
SSF48726   SSF48726       
Gene 3D
2.60.40.10     1.25.40.10    
ProteinModelPortal
A0A0L7LR73   A0A2A4J868   A0A1E1W7Y9   A0A2W1BRE2  

Ontologies

KEGG
101737697    no KO assigned | (RefSeq) uncharacterized LOC101737697
GO
GO:0016021   GO:0005515   GO:0005488   GO:0051013   GO:0005524   GO:0007179   GO:0006811   GO:0006032   GO:0004672   GO:0048384  

Topology

SignalP
Position:   1 - 19,         Likelihood:  0.995924
 
 
Length:
1143
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
23.09979
Exp number, first 60 AAs:
0.15458
Total prob of N-in:
0.00882
outside
1  -  1089
TMhelix
1090  -  1112
inside
1113  -  1143
 
 

Population Genetic Test Statistics

Pi
208.504547
Theta
168.315703
Tajima's D
0.819956
CLR
0.318295
CSRT
0.609219539023049
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26280517 NMQNVTEAPIPR 100.00 1e-06
26280517 KVVHVTAATDDK 100.00 2e-04
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