Silkworm Genome Informatics Database

Gene

KWMTBOMO04029

Pre Gene Modal

BGIBMGA010108

Annotation

CDC42_small_effector_2-like_protein_[Bombyx_mori]

Location

Bomo_Chr7(-):9323268-9355910 View in EpiBrowser

Full name

CDC42 small effector protein homolog + More
Histone acetyltransferase type B catalytic subunit

Location in the cell

Mitochondrial Reliability : 0.954

CDS

ATGGCGAGTACCGGCGGTGAAATTTGGCTTCAGTGGTTCGCGTGCTGCTACCAACCCGCGGCTCAGGCGCAACGAACCCGACGGAGAATAGACAGGTCCATGATCGGCGCGCCCACGAACTTTCAACACACGGGCCACATAGGTGTAATCCTTGATATCGATAAAACGAATGTATGCACTATCGATAACCTTAGTTGGGACAAGGTGAACGACCCAGTGACAACTATTAAGGGTGGTTTAAGGTTTAACAATTTCTATAGGTTCGAATTTGGGCATCTTCCCTTAGAGAAGGAGATTGATGAAGTGGTTTTAAGGGATAATTTCGAGTCGCCATTTGCGTTTAACGTTTAG

Protein

MASTGGEIWLQWFACCYQPAAQAQRTRRRIDRSMIGAPTNFQHTGHIGVILDIDKTNVCTIDNLSWDKVNDPVTTIKGGLRFNNFYRFEFGHLPLEKEIDEVVLRDNFESPFAFNV

Description

Probably involved in the organization of the actin cytoskeleton by acting downstream of CDC42, inducing actin filament assembly.

Catalytic Activity

acetyl-CoA + L-lysyl-[protein] = CoA + H(+) + N(6)-acetyl-L-lysyl-[protein]

Similarity

Belongs to the CDC42SE/SPEC family.
Belongs to the HAT1 family.

Keywords

Cell membrane Cell shape Complete proteome Cytoplasm Cytoskeleton Lipoprotein Membrane Palmitate Phosphoprotein Reference proteome

Feature

chain CDC42 small effector protein homolog

Uniprot

A0A194PLG4 A0A0M4ENC2 B4QWY7 B3P2G7 B4KCR0 A0A1B2AJ56 + More
B4PUU9 B4I437 B4M518 Q9VNE7 A0A232ETJ1 A0A1W4UWF7 A0A0P9CBA6 A0A067R8H2 B4JST6 B0W336 A0A0L0CLY9 A0A182FSI1 A0A1I8PUH8 A0A0N0U6J8

EC Number

2.3.1.48

Pubmed

26354079 17994087 17550304 18057021 10731132 12537572 + More
12537569 18327897 28648823 24845553 26108605

EMBL

KQ459600 KPI94276.1 CP012526 ALC45372.1 CM000364 EDX11749.1 + More
CH954181 EDV47917.1 CH933806 EDW15909.1 KX531384 ANY27194.1 CM000160 EDW97756.2 CH480821 EDW54980.1 CH940652 EDW59729.2 KRF79037.1 KRF79038.1 AE014297 AY060373 NNAY01002266 OXU21675.1 CH902617 KPU80473.1 KK852669 KDR18851.1 CH916373 EDV94826.1 DS231830 EDS30744.1 JRES01000211 KNC33257.1 KQ435726 KOX78244.1

Proteomes

UP000053268 UP000092553 UP000000304 UP000008711 UP000009192 UP000002282 + More
UP000001292 UP000008792 UP000000803 UP000215335 UP000192221 UP000007801 UP000027135 UP000001070 UP000002320 UP000037069 UP000069272 UP000095300 UP000053105

PRIDE

Q9VNE7

Pfam

PF00786 PBD + More
PF10394 Hat1_N

Interpro

IPR039056   SPEC        + More
IPR036936   CRIB_dom_sf
IPR000095   CRIB_dom
IPR016181   Acyl_CoA_acyltransferase
IPR017380   Hist_AcTrfase_B-typ_cat-su
IPR013523   Hist_AcTrfase_HAT1_C
IPR037113   Hat1_N_sf
IPR019467   Hat1_N

SUPFAM

SSF55729 SSF55729

Gene 3D

3.90.810.10 1.10.10.390 3.90.360.10

CDD

cd00132 CRIB

ProteinModelPortal

A0A194PLG4 A0A0M4ENC2 B4QWY7 B3P2G7 B4KCR0 A0A1B2AJ56 + More
B4PUU9 B4I437 B4M518 Q9VNE7 A0A232ETJ1 A0A1W4UWF7 A0A0P9CBA6 A0A067R8H2 B4JST6 B0W336 A0A0L0CLY9 A0A182FSI1 A0A1I8PUH8 A0A0N0U6J8

KEGG

692865 no KO assigned | (RefSeq) CDC42 small effector 2-like protein

GO

GO:0017048 GO:0035023 GO:0009966 GO:0005856 GO:0008360 GO:0005938 GO:0005886 GO:0042393 GO:0004402 GO:0005634 GO:0000781 GO:0006348

PANTHER

PTHR13502 PTHR12046

Subcellular location

Cytoplasm
Cytoskeleton
Cell membrane

Length:

116

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01844

Exp number, first 60 AAs:

0.01844

Total prob of N-in:

0.08354

outside

1 - 116

Pi

246.504544

Theta

161.421759

Tajima's D

1.490716

CLR

0.196006

CSRT

0.783310834458277

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics