Silkworm Genome Informatics Database

Gene

KWMTBOMO04027 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010273

Annotation

PREDICTED:_trithorax_group_protein_osa_[Amyelois_transitella]

Location

Bomo_Chr7(+):9179451-9286022 View in EpiBrowser

Transcription factor

ARID

Location in the cell

Nuclear Reliability : 3.509

CDS

ATGCCGCCGAGAACGCCGTCGTCGATGCCCGAGGGAGGCGGACAGGCGCGGGCGCCGACGCCCGGTGCCGGGCCGCCGCCGGGCGCCATGGTGCCTCAGCCCTATCCGCACCACGCCGCGTACAAGGCGCCGCACTACCCCCCGCAACCGCCCTACGGATATCCGCCGGCCAGGAACCATCATCCTTACTCGTACGGATACCGGCCGCCGCCGCCGCATCCGCCTCAGCATTATCCACCGCTCAAGCAGGCGGGAGCGCGGCACATGGGGCCGATGGGCGCGGGCGGGGAGGGCGCCATGCCGCCGCCCACCGCGCCGCTGGAGCACGACAACGGTCCCGCGCCGCCCGCCACCGCGCTCGTCACCACCGGCCCCGACGGCGCGCCCCTCGACGAGGGCAGCCAGCAGAGCACGCTCAGTAACGCTTCCGCAGCTTCCGGCGAGGAGTGCTCGTCCGGCAAGGGCCGCAAGGAGTACAGCGGCAGCGCGGCGCCCTCGCCCTCCCCGGGAGGCGCGTCCCACTCCTCGCTGCACGATGACTACGACGCGTCGCCCTCCTCCTGGCCGCGTCCGCCCTCCTCGCCCGTGTTTAACAGTCACATACCGCCGGAGACCTACAGATCAAAGGCTGAAAACCAAAGGAAACGTCGCGTAGGAGAGTCTTCGTCAGGCCCGAAGTCGGACTCGCTGGGCAAGCTGTACGAGATGGACGAGTCGCCGGAGCGGCGCGGCTGGGTGGAGCGCCTGCTCGCCTTCATGGAGGAGCGCCGCACGCCCATCGCCGCCTGCCCCACCATCTCCAAGCAGCCGCTCGACCTGTACCGCCTCTACCTGCTCGTGCGGGACCGCGGCGGCTTCGTCGAGGTGACCAAGAATAAGACGTGGAAGGACATCGCCGGTCTGCTCGGCATCGGCGCCTCGTCGTCGGCCGCGTACACGCTGCGCAAGCACTACACGAAGAACCTGCTGGCGTACGAGTGCCACTTCGACCGCGGCGGCATCGACCCGCAGCCCATCATCAACCAGGTCGAGGCTTCCACCAAGAAGAAGGGCGGGAAGGCGAACAACGCCGCCAGCGCGGCGGGCTCGTCCAACGCGGCGGAGTCGTTCGGGGCGGGGGGAGGCGCGGGGGGCGGGCCGGGCGCGGCGCCGCTGGACTATCCGCCGCAGTACGCGCCCTACCCGCCGCAACCCAACCACGCCCAGGGCGGCGGCGCGGGCGGCGACAACCTCGCCGCCTCCAACCCATTCGACGAGCCGCCGCGCCGCCCTCCAGGTTACCAGCAAGGCTACGGTTATGAGTATGGCCCTCCGTACCAGCCTAACAGGCCGGTCTACCCACCTTATGGCCCCGAAGGTGACAGGGGGTACCGTCCGGGCGGCGGCGCTGGCGGAGGCGGCGGCGAGTACCAGTACGGGGGGTACGGGGGCGCCTACCGCGGCGGAGCGCCCGCCCCGCCCGGCACGCCGCCCCCGCCCCCCGCCGCGCAGCCCTACCCGGACTACTACCGACACCAGCCGCCGCACCAGCCGCAGCACCCGCCCCAACACCCGCCCCAGCACCCGCCGCAACACCAGCCGCCGCATCAGCCCCCGCACGACTATGGGGGCGGCAAGCCGATACCGGGAGGCGGGGCTGCCCCGGGCGGCGCCAGCAGTCCGCGCCGACATCCGGACTTCGCGAAAGGCGAGGGCGCTGGGTACGCCGGTGCGCCGGGTGCGGTGGGCGGCGTGGGCGCGGTGGGCGCGGCGGGTGCCAGGTTCGGCGGCGCGTGGGCAGGCGCCTTCCCACGCGCGCCACAACCGCCCGCGCCCTCGGCAGCGTGGCGCCCGCCGCCCGCCGGCCCCCAGCCGCCACCAGCCTGGACACACCAACCTTACCCCTCACAGACGAGCGGTGGTCCAACGTGGGGCGGAGCACCGCGACCTCCCACCCAAGACGGCTATCCACCATCATCTGTTCCATCGACTGGCGTGACGACAGCTGGAACGCAAATAAAGCGAGAACTAACATTTCCCACTGAGTGCGTCGAGGGCGCCGTACCCAGCGCAGAGAAGCGGCGGCGACTCACCCGCGCTGACGTGGCCCCCGTCGACGCCTGGCGTATCATGATGGCCCTCAAGTCCGGCCTTCTGGCAGAAACTTGCTGGGCGCTCGATATCCTCAACATTCTACTCTTCGACGACAATTGCATAGGATACTTCGGGCTCCAACACATGCCGGGCTTGCTCGACCTGTTGCTCGAACACTTTCATCGAAGCCTCAGCGACGTGTTCGACGCGCCTCCCACAGATGAAGATCCGTGGTATGCGCCTCCTCGGTCGCCGACACCTCCCCCCGCCCCGCGGCCCGCCGCCGCCCCGCCCGACCCCGCCCACCGCGTGCGGGTGATCTCCGGCGAGAACTACACGCTGCAGTCACGCCGCCGGCATCCCGTGCACCTGCGCTCCGATGACGAACTGTTCGCGCCAGAGGACGAACCCGAAGATCCGCCCGACGGCGTCCAGGACGTGCTGGAGCCCTGGCAGCTCTCACCAGCTCCGCCGGCCGCCGCCCACCTTGTGCCCTGCTTCCGGGCTGAGCATCTCCATCTCCAGTTTGCGCGCGTCATGCCGGCGCGACGGCGGCCCTCCCCCCCGCCGCCCTCACCCGCACCCGAGCCCCGCCTCGCCACCCCGCCCCCTCCGCCGGAAACGCCGCGACCAGATTCAGACGATCTCGACGAGCAACCCATGGATCTAGAACCGGAGCGCAGGCCCGCTCTAGTGGTGCGCGATCCAGCCGGAGTCCTCAAACGGCGCCGCCTCGAGGATTATGAAGACGAATGTTATGAACGCGACGAACCCAGTCTCAATTTAATCAGTGAAACGAGGGACGCTCTGGCGCGACGTTGCATCGCCCTATCGAACATTTTGCGCGGACTCACTTTCGTTCCCGGTAACGAAGTAGAATTTTCACGGTCAGGTGCGTTCTTGGCGCTAGCCGGCAAACTGCTGCTGCTGCATCACGAGCACGCGCCCCGAGCGGCCCGGGCCCGCGCCTACGAGCGCGCGGCGCGGGACGACGCGGACGCGGCCGCCTGCTGCTCGTCGCTGCGCGGCGGGGCCGAGTGGTGGTGGGACACGCTGGCGCAGCTCCGCGAAGACGCCCTCGTCTGCTGTGCGAACATAGCGGGCGGCGTGGAACTTGCGGGGCAGCCCGAGGCCGTGGCGCGGCCCCTGCTGGACGGCCTGCTGCACTGGAGCGTGTGTCCGGCTGCCGTCGCGGGAGACGCTCCTCCGGCCGCGGGCGCCGCCTCCCCTCTGTCGCCGCGCAGGCTCGCGCTGGAGGCGCTGTGCAAGCTCTGCGTGACGGATGCGAACGTGGACCTGGTGCTGGCGACACCGCCGCGCGGTCGCATCGCGGCGCTGTGTGCCGGCCTGGCGCGGGACCTGTGCCGGCCGGAGCGGCCTGTGGTGCGAGAGTTCGCCGTGAACCTGCTGCACTACCTGGCGGGCGCTGGCGAGCCGGTGGCGCGCGAGGTGGCGCGACACCCTCCGGCGGTGGCGCAGCTGGTCGCCTTCATCGAGCGCGCCGAGCAGACGGCGCTGGGGGTGGCCAACCAGCACGGCGTGGCGGCGCTGCGGGACAACCCGGACGCGATGGGCACGAGCCTGGACATGCTGCGGCGCGCGGCCGCCACGCTGCTGCGGCTGGCGCGCCACCCGGACAACCGCCCGCTGATCCGCCGCCACGAGCGCCGGCTGCTGTCGCTGGTCATGAGCCAGATCCTCGACCAGAAGGTGGCGCACGAGCTGGCGGACGTGCTGTACTTCTGCAGCCAGCAGCGCGTGGACGACGACCTCCAGGAACATTGA

Protein

MPPRTPSSMPEGGGQARAPTPGAGPPPGAMVPQPYPHHAAYKAPHYPPQPPYGYPPARNHHPYSYGYRPPPPHPPQHYPPLKQAGARHMGPMGAGGEGAMPPPTAPLEHDNGPAPPATALVTTGPDGAPLDEGSQQSTLSNASAASGEECSSGKGRKEYSGSAAPSPSPGGASHSSLHDDYDASPSSWPRPPSSPVFNSHIPPETYRSKAENQRKRRVGESSSGPKSDSLGKLYEMDESPERRGWVERLLAFMEERRTPIAACPTISKQPLDLYRLYLLVRDRGGFVEVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEASTKKKGGKANNAASAAGSSNAAESFGAGGGAGGGPGAAPLDYPPQYAPYPPQPNHAQGGGAGGDNLAASNPFDEPPRRPPGYQQGYGYEYGPPYQPNRPVYPPYGPEGDRGYRPGGGAGGGGGEYQYGGYGGAYRGGAPAPPGTPPPPPAAQPYPDYYRHQPPHQPQHPPQHPPQHPPQHQPPHQPPHDYGGGKPIPGGGAAPGGASSPRRHPDFAKGEGAGYAGAPGAVGGVGAVGAAGARFGGAWAGAFPRAPQPPAPSAAWRPPPAGPQPPPAWTHQPYPSQTSGGPTWGGAPRPPTQDGYPPSSVPSTGVTTAGTQIKRELTFPTECVEGAVPSAEKRRRLTRADVAPVDAWRIMMALKSGLLAETCWALDILNILLFDDNCIGYFGLQHMPGLLDLLLEHFHRSLSDVFDAPPTDEDPWYAPPRSPTPPPAPRPAAAPPDPAHRVRVISGENYTLQSRRRHPVHLRSDDELFAPEDEPEDPPDGVQDVLEPWQLSPAPPAAAHLVPCFRAEHLHLQFARVMPARRRPSPPPPSPAPEPRLATPPPPPETPRPDSDDLDEQPMDLEPERRPALVVRDPAGVLKRRRLEDYEDECYERDEPSLNLISETRDALARRCIALSNILRGLTFVPGNEVEFSRSGAFLALAGKLLLLHHEHAPRAARARAYERAARDDADAAACCSSLRGGAEWWWDTLAQLREDALVCCANIAGGVELAGQPEAVARPLLDGLLHWSVCPAAVAGDAPPAAGAASPLSPRRLALEALCKLCVTDANVDLVLATPPRGRIAALCAGLARDLCRPERPVVREFAVNLLHYLAGAGEPVAREVARHPPAVAQLVAFIERAEQTALGVANQHGVAALRDNPDAMGTSLDMLRRAAATLLRLARHPDNRPLIRRHERRLLSLVMSQILDQKVAHELADVLYFCSQQRVDDDLQEH

Uniprot

NA

ProteinModelPortal

NA

PDB

2EH9 E-value=9.55406e-19, Score=235

KEGG

101745976 K11653 AT-rich interactive domain-containing protein 1 | (RefSeq) trithorax group protein osa

GO

GO:0003677 GO:0005488 GO:0051013 GO:0005524 GO:0007179 GO:0006811 GO:0006032 GO:0016021 GO:0004672 GO:0048384

Length:

1285

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00926999999999998

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00015

outside

1 - 1285

Pi

255.848928

Theta

180.312713

Tajima's D

1.109723

CLR

0.438524

CSRT

0.690865456727164

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics