Gene

KWMTBOMO04024

Pre Gene Modal

BGIBMGA010268

Annotation

PREDICTED:_trafficking_protein_particle_complex_subunit_10_[Bombyx_mori]

Location

Bomo_Chr7(+):9113361-9118471      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.079 Nuclear   Reliability : 1.006

CDS

ATGGTAGCGTCAGACGGCACGACGGCCTCCTTCATGTGGGAGCTGCTGAAGGATCCCCTCGTGAAGGCGGGACCGATGAAGTCGATATTCTCCGTGCAGTACCAGGCGACGGGCGGCGAGGAGCCGGCGCGGCCCTTCGTCTGCCCCTTCGACATCCAGGACTACACGACGCTGTTCGTCATCAGGACCAGGCTGGAGCCCTGCAAGGGGTCGGACTTCTGCAGAGCGTCGCAGATGTGCTGCTTGCAGCTCAACGTGCAACGGGTTAACGAAACTGAGCACACGTCACTGATGTACGAAGTCCTAGCAGATCAGACGATGTGGGCAGTACTGGGCCGAACTGCGGGTGTGATAACGACGGAGTCTGCGAGCGCGGACCCGCAGTGCGTGGCGCTGGACGTGATGCCGCTGGTGGCCGGCTACTTGCCGCTGCCCACCGTCCGCCTCTCCAAGTACATCGCAGCCAACGCCAAGGATAGCTCATCCCACCCGCGTCTGGAGCCCTTCAGTCCGGGGCAAATATACCACGCGGGGAAGGCGAAACAAGTGCACGTCCTGCCCCCCATGCCGAAAGAACATTTGGAACCAACCGCTAATTAA

Protein

MVASDGTTASFMWELLKDPLVKAGPMKSIFSVQYQATGGEEPARPFVCPFDIQDYTTLFVIRTRLEPCKGSDFCRASQMCCLQLNVQRVNETEHTSLMYEVLADQTMWAVLGRTAGVITTESASADPQCVALDVMPLVAGYLPLPTVRLSKYIAANAKDSSSHPRLEPFSPGQIYHAGKAKQVHVLPPMPKEHLEPTAN

Uniprot

A0A2H1W0N4   A0A2A4JHN0   A0A2W1CNX6   H9JL67   A0A212EUC2   A0A194PT11   + More
A0A2J7QA13   A0A2P8YY38   A0A067QSA2   A0A2J7QA27   A0A1B6FZD8   A0A1B6ETP7   A0A1B6DTM9   A0A1B6CSP2   A0A1B6K8D5   A0A1B6JVM2   A0A1B6M1M7   T1I9E9   D6WU19   A0A023EZE9   A0A0P4VQ75   A0A224XH92   A0A0C9RPI0   F4W839   A0A2R7X287   E2A0P2   A0A026WI98   A0A1Y1M615   A0A3L8E0G8   A0A0J7L374   A0A158NDR7   A0A195EZE1   A0A310SEP3   A0A182GPC2   A0A195CLG7   E9J503   A0A151X4M6   E2B8E7   A0A0P6FN25   A0A336MVC5   A0A336MQ46   E9HCB9   K7ISG8   E0VLZ8   A0A0A9Z675   A0A195D7M5   A0A1B0DP71   A0A0P5XWE2   A0A0P5C4Z6   A0A0P5WUX3   A0A0P5G0B1   A0A0P6F0N2   A0A0P6FL46   A0A0P5ARK7   A0A0P5XPL0   A0A0N8CS84   A0A0P5BYI1   A0A2M4BAU0   A0A2M4BAS7   A0A195BPE0   A0A0N0BDV1   A0A0P5X209   A0A0L7R7Z9   A0A1B0CI91   A0A0P5W993   A0A0P5JUX4   A0A0P5EG86   A0A0P6CSN9   A0A0P5U1R7   A0A0P5U2R0   A0A0N8DFF0   A0A0P4YY44   A0A0P5V506   A0A0P5NVM6   A0A0P5ULW5   A0A0N8EAV9   A0A0P5MTK6   A0A0P5LNZ0   A0A0P5L3W5   A0A0P6GFC0   A0A2M4BBF5   A0A0P6J0H8   A0A088AJ40   A0A0T6AWT4   A0A2A3E6L9   A0A087TKN0   A0A182FSX0   W5J2W7   A0A084W2N9   A0A2M4ABR4   A0A2M4ABH4   A0A2M4ABD4   A0A182JJA6   W8B418   A0A0P5UYB8   A0A154PH83   A0A182T8Z2   A0A1Q3F869   A0A182JT61  

Pubmed

28756777    19121390    22118469    26354079    29403074    24845553    + More
18362917    19820115    25474469    27129103    21719571    20798317    24508170    28004739    30249741    21347285    26483478    21282665    21292972    20075255    20566863    25401762    20920257    23761445    24438588    24495485   

EMBL

ODYU01005618    SOQ46649.1    NWSH01001544    PCG70902.1    NHMN01022918    PZC87377.1    + More
BABH01011730    BABH01011731    BABH01011732    AGBW02012412    OWR45095.1    KQ459600    KPI94270.1    NEVH01016339    PNF25423.1    PYGN01000291    PSN49161.1    KK852994    KDR12739.1    PNF25422.1    GECZ01014214    JAS55555.1    GECZ01028489    JAS41280.1    GEDC01008264    GEDC01007513    JAS29034.1    JAS29785.1    GEDC01020911    JAS16387.1    GECU01000001    JAT07706.1    GECU01004451    JAT03256.1    GEBQ01010150    JAT29827.1    ACPB03016453    KQ971352    EFA06745.1    GBBI01004090    JAC14622.1    GDKW01003269    JAI53326.1    GFTR01008596    JAW07830.1    GBYB01010345    JAG80112.1    GL887888    EGI69709.1    KK856321    PTY25490.1    GL435626    EFN72945.1    KK107207    EZA55391.1    GEZM01043057    JAV79346.1    QOIP01000002    RLU26204.1    LBMM01000883    KMQ97292.1    ADTU01012806    KQ981906    KYN33277.1    KQ760629    OAD59730.1    JXUM01078071    KQ563043    KXJ74586.1    KQ977600    KYN01543.1    GL768123    EFZ12077.1    KQ982548    KYQ55178.1    GL446312    EFN88046.1    GDIQ01058041    GDIQ01055450    JAN39287.1    UFQS01002542    UFQT01002542    SSX14240.1    SSX33655.1    UFQS01000939    UFQT01000939    SSX07864.1    SSX28098.1    GL732619    EFX70597.1    DS235283    EEB14404.1    GBHO01030494    GBHO01028443    GBHO01028442    GBHO01002864    GBHO01002862    JAG13110.1    JAG15161.1    JAG15162.1    JAG40740.1    JAG40742.1    KQ981153    KYN08876.1    AJVK01007931    GDIP01078976    JAM24739.1    GDIP01179716    JAJ43686.1    GDIP01081427    JAM22288.1    GDIQ01248037    JAK03688.1    GDIQ01055451    JAN39286.1    GDIQ01058042    JAN36695.1    GDIP01194973    JAJ28429.1    GDIP01081426    JAM22289.1    GDIP01103975    JAL99739.1    GDIP01193523    JAJ29879.1    GGFJ01000999    MBW50140.1    GGFJ01000998    MBW50139.1    KQ976424    KYM88375.1    KQ435851    KOX70722.1    GDIP01078977    JAM24738.1    KQ414637    KOC66958.1    AJWK01013105    AJWK01013106    GDIP01089634    JAM14081.1    GDIQ01194744    JAK56981.1    GDIP01143774    JAJ79628.1    GDIQ01087881    JAN06856.1    GDIP01118970    JAL84744.1    GDIP01118971    JAL84743.1    GDIP01167674    GDIP01039047    LRGB01001569    JAM64668.1    KZS11777.1    GDIP01222019    JAJ01383.1    GDIP01103976    JAL99738.1    GDIQ01147162    JAL04564.1    GDIP01113332    JAL90382.1    GDIQ01044796    JAN49941.1    GDIQ01152055    JAK99670.1    GDIQ01177553    JAK74172.1    GDIQ01175689    JAK76036.1    GDIQ01106576    GDIQ01060401    GDIQ01033902    JAN60835.1    GGFJ01000997    MBW50138.1    GDIQ01014646    JAN80091.1    LJIG01022634    KRT79522.1    KZ288368    PBC26809.1    KK115661    KFM65669.1    ADMH02002125    ETN58652.1    ATLV01019658    KE525276    KFB44483.1    GGFK01004910    MBW38231.1    GGFK01004788    MBW38109.1    GGFK01004776    MBW38097.1    GAMC01014737    JAB91818.1    GDIP01106627    JAL97087.1    KQ434899    KZC10834.1    GFDL01011318    JAV23727.1   

Proteomes

UP000218220    UP000005204    UP000007151    UP000053268    UP000235965    UP000245037    + More
UP000027135    UP000015103    UP000007266    UP000007755    UP000000311    UP000053097    UP000279307    UP000036403    UP000005205    UP000078541    UP000069940    UP000249989    UP000078542    UP000075809    UP000008237    UP000000305    UP000002358    UP000009046    UP000078492    UP000092462    UP000078540    UP000053105    UP000053825    UP000092461    UP000076858    UP000005203    UP000242457    UP000054359    UP000069272    UP000000673    UP000030765    UP000075880    UP000076502    UP000075901    UP000075881   

PRIDE

H9JL67   

Pfam

PF12584   TRAPPC10        + More
PF11817   Foie-gras_1

Interpro

IPR022233   TRAPP_II_complex_TRAPPC10        + More
IPR011990   TPR-like_helical_dom_sf       
IPR021773   TPC11       

SUPFAM

SSF48452   SSF48452       

Gene 3D

1.25.40.10    

ProteinModelPortal

A0A2H1W0N4   A0A2A4JHN0   A0A2W1CNX6   H9JL67   A0A212EUC2   A0A194PT11   + More
A0A2J7QA13   A0A2P8YY38   A0A067QSA2   A0A2J7QA27   A0A1B6FZD8   A0A1B6ETP7   A0A1B6DTM9   A0A1B6CSP2   A0A1B6K8D5   A0A1B6JVM2   A0A1B6M1M7   T1I9E9   D6WU19   A0A023EZE9   A0A0P4VQ75   A0A224XH92   A0A0C9RPI0   F4W839   A0A2R7X287   E2A0P2   A0A026WI98   A0A1Y1M615   A0A3L8E0G8   A0A0J7L374   A0A158NDR7   A0A195EZE1   A0A310SEP3   A0A182GPC2   A0A195CLG7   E9J503   A0A151X4M6   E2B8E7   A0A0P6FN25   A0A336MVC5   A0A336MQ46   E9HCB9   K7ISG8   E0VLZ8   A0A0A9Z675   A0A195D7M5   A0A1B0DP71   A0A0P5XWE2   A0A0P5C4Z6   A0A0P5WUX3   A0A0P5G0B1   A0A0P6F0N2   A0A0P6FL46   A0A0P5ARK7   A0A0P5XPL0   A0A0N8CS84   A0A0P5BYI1   A0A2M4BAU0   A0A2M4BAS7   A0A195BPE0   A0A0N0BDV1   A0A0P5X209   A0A0L7R7Z9   A0A1B0CI91   A0A0P5W993   A0A0P5JUX4   A0A0P5EG86   A0A0P6CSN9   A0A0P5U1R7   A0A0P5U2R0   A0A0N8DFF0   A0A0P4YY44   A0A0P5V506   A0A0P5NVM6   A0A0P5ULW5   A0A0N8EAV9   A0A0P5MTK6   A0A0P5LNZ0   A0A0P5L3W5   A0A0P6GFC0   A0A2M4BBF5   A0A0P6J0H8   A0A088AJ40   A0A0T6AWT4   A0A2A3E6L9   A0A087TKN0   A0A182FSX0   W5J2W7   A0A084W2N9   A0A2M4ABR4   A0A2M4ABH4   A0A2M4ABD4   A0A182JJA6   W8B418   A0A0P5UYB8   A0A154PH83   A0A182T8Z2   A0A1Q3F869   A0A182JT61  

KEGG

101745540    K20307 trafficking protein particle complex subunit 10 | (RefSeq) trafficking protein particle compl

GO

GO:1990071   GO:0034498   GO:0006891   GO:0005829   GO:0016021  

Length:

199

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01389

Exp number, first 60 AAs:

0.00038

Total prob of N-in:

0.11004

outside

1  -  199

 

 

Pi

257.367423

Theta

128.373173

Tajima's D

2.364321

CLR

0.891102

CSRT

0.930353482325884

Interpretation

Uncertain