Gene

KWMTBOMO04022

Pre Gene Modal

BGIBMGA010268

Annotation

PREDICTED:_trafficking_protein_particle_complex_subunit_10_[Bombyx_mori]

Location

Bomo_Chr7(+):9096991-9100027      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.618

CDS

ATGAAGGGTGTTGGTAGTTTACCAGCTGATAGGGAGGGAATGATCAATAAACCTATCGTTACATGCGCGGGAGATTGGAATTTGTTCTGTACGTTAGAAGCGCCGCTCGTTGCTGCTATCCCTCAGGACTCTTGTGAGTGGAGAAGATCATACGGTCGTGCAACAAAGTCTGTTTACTTGGAAGCTTCATTCATAAAATACAATAAAGAAAAACTTCAATCAGAATTGAATTTGTTAAAACGCCCAATACTTCAAGTTTATTGGACTGATTGTGTGGACATTGAGTATTATAAGACAACACTGCGAGAAGAAATAGAAACATGGTTGAAACAATTAGAAAAAGCAAATGTAACAGATTGGATGATTGTCCAAGTAGAAACTTATGATATAAGGAAAGCAAACAAACTTTTACCGAGAACAACAGTTTTGGATAAAATAAAAGGAGATTTTGCAGTAAAGCAGAATGAAGATAGATTTATATCAGTAATAAATCCTATAAAATCAGAGGCTAGAAGTGCTGAATCATGGAGAGCTTTGGTGGCAAAGATGAGACACTTTATTCTTGTTGCTTATAATAAGGCATTGATTAAATTTGAAGAGTATATGAGAGAGCAGAGAGAAAAACGGAATGATTCAGATTGGGATTTTTGTAAATATTTCATTTTACAGGAACAACTAGCATTTGTGCTAGAAATGTTAGGATTATATGATGAAGCACTGGTTCAGTATGATGAATTAGATGCTCTGTTTTCGCAATTTGTACTCAACTCAAATATAGCAGAGAGTCCGAAATGGCTCGACACATTTAGACAGCCAGTAAGTTCGTGGCAAGCTGTGAGACTGACCACTCTCGTTCCTCAGCACTTGAGAGAACTGATAATTAAGAAGAGAGCTTCTTTGTTGGATTTTAGAAGTTATCTGTTTCAAAGACAAAGTGCCATGTTATTACTAACATTTAAACCTTGGGAGGATTTCAAGTAA

Protein

MKGVGSLPADREGMINKPIVTCAGDWNLFCTLEAPLVAAIPQDSCEWRRSYGRATKSVYLEASFIKYNKEKLQSELNLLKRPILQVYWTDCVDIEYYKTTLREEIETWLKQLEKANVTDWMIVQVETYDIRKANKLLPRTTVLDKIKGDFAVKQNEDRFISVINPIKSEARSAESWRALVAKMRHFILVAYNKALIKFEEYMREQREKRNDSDWDFCKYFILQEQLAFVLEMLGLYDEALVQYDELDALFSQFVLNSNIAESPKWLDTFRQPVSSWQAVRLTTLVPQHLRELIIKKRASLLDFRSYLFQRQSAMLLLTFKPWEDFK

Uniprot

H9JL67   A0A2A4JHN0   A0A2W1CNX6   A0A2H1W0N4   A0A194PT11   A0A194RMK7   + More
A0A212EUC2   A0A067QSA2   A0A2J7QA27   A0A2P8YY38   A0A0J7L374   A0A3L8E0G8   E2A0P2   A0A195EZE1   E9J503   A0A232FMA8   A0A158NDR7   K7ISG8   E2B8E7   A0A310SEP3   A0A0L7R7Z9   A0A151X4M6   A0A0N0BDV1   A0A2A3E6L9   A0A088AJ40   A0A195BPE0   A0A195D7M5   A0A1B6CSP2   A0A195CLG7   A0A224XH92   A0A0A9YGU3   A0A023EZE9   A0A146KPY3   A0A1Y1M2T2   T1I9E9   A0A146L5M7   E0VLZ8   A0A1B6K5K1   A0A1Y1M615   A0A2S2PWR9   A0A2P2I4R7   A0A0T6AWT4   A0A154PH83   A0A182SB31   A0A139WBM0   A0A1B0DP71   N6UHW9   A0A084W2N9   A0A1B0CI91   A0A2H8TQW8   A0A182JJA6   A0A182X391   Q7QKA8   A0A182V253   A0A182LQH9   A0A3F2YX77   A0A182U6Y6   B0WLN5   A0A182RH39   J9JPA8   A0A182NMP8   A0A1Q3F869   A0A0P5VEF0   A0A182VQ33   A0A182Y4P7   Q16RX3   A0A182M9T0   A0A182G317   A0A0K2SZN8   A0A182JT61   A0A182HZG9   A0A0P5BJ15   A0A0P6FUH1   A0A0P5KNE2   A0A0N8CYZ6   A0A0N8E3G6   A0A0P5NIQ6   A0A182PCR8   A0A0P6EDJ4   A0A0P5R7D9   A0A0P5B7D7   A0A0P5A5J1   A0A0P5J2N7   A0A0P5ZG98   A0A0P5X209   A0A0P5U1R7   A0A0P5U1P7   A0A0P6FL46   A0A0P5ULW5   A0A0P6BT75   A0A0P5XYJ5   A0A0P6G5Q0   A0A0P4YY44   A0A0N8EAV9   A0A0P5LNZ0   A0A0P6GC45   A0A0P5NVM6   A0A0P5U2R0   A0A0P6GFC0   A0A0P5MTK6  

Pubmed

19121390    28756777    26354079    22118469    24845553    29403074    + More
30249741    20798317    21282665    28648823    21347285    20075255    25401762    25474469    26823975    28004739    20566863    18362917    19820115    23537049    24438588    12364791    14747013    17210077    20966253    25244985    17510324    26483478   

EMBL

BABH01011730    BABH01011731    BABH01011732    NWSH01001544    PCG70902.1    NHMN01022918    + More
PZC87377.1    ODYU01005618    SOQ46649.1    KQ459600    KPI94270.1    KQ459995    KPJ18560.1    AGBW02012412    OWR45095.1    KK852994    KDR12739.1    NEVH01016339    PNF25422.1    PYGN01000291    PSN49161.1    LBMM01000883    KMQ97292.1    QOIP01000002    RLU26204.1    GL435626    EFN72945.1    KQ981906    KYN33277.1    GL768123    EFZ12077.1    NNAY01000019    OXU31886.1    ADTU01012806    GL446312    EFN88046.1    KQ760629    OAD59730.1    KQ414637    KOC66958.1    KQ982548    KYQ55178.1    KQ435851    KOX70722.1    KZ288368    PBC26809.1    KQ976424    KYM88375.1    KQ981153    KYN08876.1    GEDC01020911    JAS16387.1    KQ977600    KYN01543.1    GFTR01008596    JAW07830.1    GBHO01014874    JAG28730.1    GBBI01004090    JAC14622.1    GDHC01021163    JAP97465.1    GEZM01043056    JAV79348.1    ACPB03016453    GDHC01014845    JAQ03784.1    DS235283    EEB14404.1    GECU01000974    JAT06733.1    GEZM01043057    JAV79346.1    GGMS01000666    MBY69869.1    IACF01003247    LAB68870.1    LJIG01022634    KRT79522.1    KQ434899    KZC10834.1    KQ971372    KYB25316.1    AJVK01007931    APGK01019569    KB740112    ENN81340.1    ATLV01019658    KE525276    KFB44483.1    AJWK01013105    AJWK01013106    GFXV01004781    MBW16586.1    AAAB01008799    EAA03661.5    AXCN02001211    DS231988    EDS30577.1    ABLF02024479    GFDL01011318    JAV23727.1    GDIP01101027    JAM02688.1    CH477694    EAT37176.1    AXCM01000279    JXUM01140583    KQ569087    KXJ68771.1    HACA01001888    CDW19249.1    APCN01001975    GDIP01188124    JAJ35278.1    GDIQ01175690    GDIQ01060400    JAN34337.1    GDIQ01181842    JAK69883.1    GDIP01085079    JAM18636.1    GDIQ01065540    JAN29197.1    GDIQ01152054    JAK99671.1    GDIQ01065541    JAN29196.1    GDIQ01106575    JAL45151.1    GDIP01193522    JAJ29880.1    GDIP01203915    JAJ19487.1    GDIQ01212038    JAK39687.1    GDIP01044190    JAM59525.1    GDIP01078977    JAM24738.1    GDIP01118970    JAL84744.1    GDIP01118969    JAL84745.1    GDIQ01058042    JAN36695.1    GDIP01113332    JAL90382.1    GDIP01009866    JAM93849.1    GDIP01066731    JAM36984.1    GDIQ01038003    JAN56734.1    GDIP01222019    JAJ01383.1    GDIQ01044796    JAN49941.1    GDIQ01177553    JAK74172.1    GDIQ01038002    JAN56735.1    GDIQ01147162    JAL04564.1    GDIP01118971    JAL84743.1    GDIQ01106576    GDIQ01060401    GDIQ01033902    JAN60835.1    GDIQ01152055    JAK99670.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000027135    + More
UP000235965    UP000245037    UP000036403    UP000279307    UP000000311    UP000078541    UP000215335    UP000005205    UP000002358    UP000008237    UP000053825    UP000075809    UP000053105    UP000242457    UP000005203    UP000078540    UP000078492    UP000078542    UP000015103    UP000009046    UP000076502    UP000075901    UP000007266    UP000092462    UP000019118    UP000030765    UP000092461    UP000075880    UP000076407    UP000007062    UP000075903    UP000075882    UP000075886    UP000075902    UP000002320    UP000075900    UP000007819    UP000075884    UP000075920    UP000076408    UP000008820    UP000075883    UP000069940    UP000249989    UP000075881    UP000075840    UP000075885   

PRIDE

H9JL67   

Pfam

PF12584   TRAPPC10        + More
PF11817   Foie-gras_1

Interpro

IPR022233   TRAPP_II_complex_TRAPPC10        + More
IPR021773   TPC11       
IPR011990   TPR-like_helical_dom_sf       

SUPFAM

SSF48452   SSF48452       

Gene 3D

1.25.40.10    

ProteinModelPortal

H9JL67   A0A2A4JHN0   A0A2W1CNX6   A0A2H1W0N4   A0A194PT11   A0A194RMK7   + More
A0A212EUC2   A0A067QSA2   A0A2J7QA27   A0A2P8YY38   A0A0J7L374   A0A3L8E0G8   E2A0P2   A0A195EZE1   E9J503   A0A232FMA8   A0A158NDR7   K7ISG8   E2B8E7   A0A310SEP3   A0A0L7R7Z9   A0A151X4M6   A0A0N0BDV1   A0A2A3E6L9   A0A088AJ40   A0A195BPE0   A0A195D7M5   A0A1B6CSP2   A0A195CLG7   A0A224XH92   A0A0A9YGU3   A0A023EZE9   A0A146KPY3   A0A1Y1M2T2   T1I9E9   A0A146L5M7   E0VLZ8   A0A1B6K5K1   A0A1Y1M615   A0A2S2PWR9   A0A2P2I4R7   A0A0T6AWT4   A0A154PH83   A0A182SB31   A0A139WBM0   A0A1B0DP71   N6UHW9   A0A084W2N9   A0A1B0CI91   A0A2H8TQW8   A0A182JJA6   A0A182X391   Q7QKA8   A0A182V253   A0A182LQH9   A0A3F2YX77   A0A182U6Y6   B0WLN5   A0A182RH39   J9JPA8   A0A182NMP8   A0A1Q3F869   A0A0P5VEF0   A0A182VQ33   A0A182Y4P7   Q16RX3   A0A182M9T0   A0A182G317   A0A0K2SZN8   A0A182JT61   A0A182HZG9   A0A0P5BJ15   A0A0P6FUH1   A0A0P5KNE2   A0A0N8CYZ6   A0A0N8E3G6   A0A0P5NIQ6   A0A182PCR8   A0A0P6EDJ4   A0A0P5R7D9   A0A0P5B7D7   A0A0P5A5J1   A0A0P5J2N7   A0A0P5ZG98   A0A0P5X209   A0A0P5U1R7   A0A0P5U1P7   A0A0P6FL46   A0A0P5ULW5   A0A0P6BT75   A0A0P5XYJ5   A0A0P6G5Q0   A0A0P4YY44   A0A0N8EAV9   A0A0P5LNZ0   A0A0P6GC45   A0A0P5NVM6   A0A0P5U2R0   A0A0P6GFC0   A0A0P5MTK6  

KEGG

101745540    K20307 trafficking protein particle complex subunit 10 | (RefSeq) trafficking protein particle compl

GO

GO:0016021   GO:0005829   GO:0034498   GO:0006891   GO:1990071  

Length:

326

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00748999999999998

Exp number, first 60 AAs:

0.00584

Total prob of N-in:

0.00655

outside

1  -  326

 

 

Pi

281.904706

Theta

212.233421

Tajima's D

1.293324

CLR

0.274332

CSRT

0.730913454327284

Interpretation

Uncertain