Gene

KWMTBOMO04020

Pre Gene Modal

BGIBMGA010110

Annotation

PREDICTED:_mothers_against_decapentaplegic_homolog_4_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr7(-):9085098-9089840      View in EpiBrowser

Full name

Mothers against decapentaplegic homolog      

Alternative Name

SMAD family member

Location in the cell

Cytoplasmic   Reliability : 1.23 Extracellular   Reliability : 1.346

CDS

ATGACTTCCATCAATGGCAACCCCGGTGGCTTACTCTCAAGTCAACCAGCGCCCGAATACTGGTGCTCTGTTGCGTATTTTGAACTTGACACACAAGTAGGAGAAACATTCAAAGTACCTTCCAGTAGACCCAATGTTACTGTGGACGGTTACGTTGATCCTTCAGGTGGGAACAGGTTCTGTTTAGGTGCTCTCAGTAATGTCCACAGAACGGAACAAAGTGAACGGGCAAGACTACACATAGGCAAAGGCGTTCAGTTAGATTTGCGCGGTGAGGGTGACGTGTGGCTTCGATGTTTGTCGGATCATTCGGTCTTCGTACAATCATATTATTTGGATCGGGAGGCTGGCAGAGCCCCTGGGGATGCTGTTCACAAGATATACCCATCGGCTTGTATAAAGGTGTTCGACTTGAGGCAGTGCCACCGACAGATGCAGTCGCAGGCCGCCACCGCGCAGGCCGCCGCCGCCGCGCAGGCCGCCGCCGTCGCCGGACACATTCAGCCGCAACACCCCACCATGAATAAGTGTCTAACTGCGGCCGCCGGTATAGGAGTGGACGATTTGCGACGCCTGTGTATCGTGAGGCTCTCGTTTGTGAAGGGTTGGGGCCCTGATTACCCTCGAACCTCGATCAAGGAGACGCCTTGCTGGGTTGAAGTGCATTTACATAGAGCACTTCAGCTCCTCGACGAGGTACTGCACACGATGCCCATCGACGGTCCCCGGTCGACCATCGAGTAG

Protein

MTSINGNPGGLLSSQPAPEYWCSVAYFELDTQVGETFKVPSSRPNVTVDGYVDPSGGNRFCLGALSNVHRTEQSERARLHIGKGVQLDLRGEGDVWLRCLSDHSVFVQSYYLDREAGRAPGDAVHKIYPSACIKVFDLRQCHRQMQSQAATAQAAAAAQAAAVAGHIQPQHPTMNKCLTAAAGIGVDDLRRLCIVRLSFVKGWGPDYPRTSIKETPCWVEVHLHRALQLLDEVLHTMPIDGPRSTIE

Similarity

Belongs to the dwarfin/SMAD family.

Uniprot

H9JKQ9   A0A2W1CJJ7   A0A2A4JH37   A0A220QT57   A0A2A4JHI9   A0A2H1W0N3   + More
A0A194PNF4   A0A194RR97   A0A212EUG5   W8CCH4   V9ILV6   A0A290Y216   A0A158NWM7   A0A143WDL7   A0A067R1V3   T1P7I9   A0A1W4X564   U5EPY5   A0A1B6CWR8   D6W7L5   A0A139WP52   A0A1B6LR12   A0A1B6MED3   Q6PUB0   A0A154NZX7   N6TG83   A0A2M4BJ65   A0A1D2NIG9   E9IMX2   A0A2J7QI80   A0A088AF28   A0A195AZ55   A0A1L8DM78   A0A2A3ET95   A0A151J4K9   F4X067   A0A0C9R1S7   A0A151JWE9   A0A1L8DLR9   A0A026X2I2   A0A2J7QI47   A0A0C9QJQ6   A0A0P5EPJ9   A0A2J7QI55   A0A0J7P5Y5   A0A2J7QI57   A0A3L8DPI0   A0A195D1K5   A0A0P5F4U1   A0A0N7ZP95   I5AND6   A0A0P5TWS1   A0A146L531   A0A232FJQ7   A0A182LG83   A0A0P4YLU0   A0A146LYN4   A0A0N8CLW4   A0A1J1IHW5   A0A146M0Y8   A0A0P5Y6K5   A0A0Q9WZ20   A0A182VJA5   E2A8L7   A0A1I8Q8R9   A0A224XAD9   F8V239   O77069   B4JH81   Q8IMG6   A0A182VRN2   A0A0N8A5N2   B4G2C1   E9GJB7   A0A182N546   B4K7Y4   A0A0P5N804   A0A0R1E6M9   A0A3B0JIG4   Q29AF0   Q7QD16   A0A0Q9WSX5   A0A0P5UQ31   A0A0K8WJQ9   A0A034WME3   Q7KPL1   F7IWH2   A0A1I8Q8U4   B3MSY9   B3P525   A0A182QJ24   A0A1I8Q8S1   W5JA32   B4IJ10   A0A2M4AIU8   O76259   A0A3Q0ITD0   A0A2M3Z693   O62609   A0A2M4BEP2  

Pubmed

19121390    28756777    26354079    22118469    24495485    21347285    + More
26706852    24845553    18362917    19820115    15302159    23537049    27289101    21282665    21719571    24508170    30249741    15632085    17994087    26823975    28648823    20966253    20798317    21627820    9694800    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    21292972    17550304    12364791    14747013    17210077    25348373    9693372    20920257    23761445    9502722    9502724    9502733    26109357    26109356   

EMBL

BABH01011730    NHMN01022918    PZC87378.1    NWSH01001544    PCG70904.1    KY328720    + More
ASK12088.1    PCG70903.1    ODYU01005618    SOQ46650.1    KQ459600    KPI94269.1    KQ459995    KPJ18561.1    AGBW02012412    OWR45094.1    GAMC01003691    JAC02865.1    JR050610    AEY61314.1    KX951666    ATD85051.1    ADTU01028226    LN901332    CUT08827.1    KK853083    KDR11613.1    KA644429    AFP59058.1    GANO01000013    JAB59858.1    GEDC01019346    JAS17952.1    KQ971307    EFA11586.2    KYB29779.1    GEBQ01013862    JAT26115.1    GEBQ01005707    JAT34270.1    AY578816    AAT07321.1    KQ434782    KZC04644.1    APGK01039066    KB740967    KB632399    ENN76783.1    ERL94731.1    GGFJ01003959    MBW53100.1    LJIJ01000034    ODN04885.1    GL764255    EFZ18107.1    NEVH01013960    PNF28263.1    KQ976698    KYM77486.1    GFDF01006620    JAV07464.1    KZ288185    PBC34910.1    KQ980126    KYN17566.1    GL888493    EGI60132.1    GBYB01000801    JAG70568.1    KQ981682    KYN38073.1    GFDF01006676    JAV07408.1    KK107020    EZA62515.1    PNF28265.1    GBYB01000800    GBYB01000802    JAG70567.1    JAG70569.1    GDIQ01266423    JAJ85301.1    PNF28262.1    LBMM01000017    KMR05328.1    KMR05329.1    PNF28264.1    QOIP01000006    RLU21799.1    KQ976973    KYN06726.1    GDIQ01265780    JAJ85944.1    GDIP01225977    JAI97424.1    CM000070    EIM52471.1    GDIP01120938    JAL82776.1    GDHC01015096    JAQ03533.1    NNAY01000129    OXU30698.1    GDIP01225976    JAI97425.1    GDHC01006942    JAQ11687.1    GDIP01118935    JAL84779.1    CVRI01000050    CRK99354.1    GDHC01006192    JAQ12437.1    GDIP01062201    GDIQ01044805    JAM41514.1    JAN49932.1    CH933806    KRG00965.1    GL437652    EFN70204.1    GFTR01007090    JAW09336.1    JN006975    AEI25994.1    AF019753    AAC35436.1    CH916369    EDV92772.1    AE014297    AAN14277.1    GDIP01180081    JAJ43321.1    CH479179    EDW23966.1    GL732547    EFX80419.1    EDW14318.1    GDIQ01157165    JAK94560.1    CM000160    KRK04741.1    OUUW01000005    SPP80513.1    EAL27400.2    AAAB01008859    EAA08190.4    CH964232    KRF99338.1    GDIP01109937    JAL93777.1    GDHF01016736    GDHF01001209    JAI35578.1    JAI51105.1    GAKP01003133    JAC55819.1    AF057162    AAC62005.1    AY578805    AAT07310.1    CH902623    EDV30379.2    CH954182    EDV52939.1    AXCN02000174    ADMH02001856    ETN60851.1    CH480846    EDW50963.1    GGFK01007389    MBW40710.1    AF039233    AAC25634.1    GGFM01003280    MBW24031.1    AF027729    AF041439    AY069496    AAC38971.1    AAC38972.1    AAF57172.1    AAL39641.1    GGFJ01002322    MBW51463.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000005205    + More
UP000027135    UP000192223    UP000007266    UP000076502    UP000019118    UP000030742    UP000094527    UP000235965    UP000005203    UP000078540    UP000242457    UP000078492    UP000007755    UP000078541    UP000053097    UP000036403    UP000279307    UP000078542    UP000001819    UP000215335    UP000075882    UP000183832    UP000009192    UP000075903    UP000000311    UP000095300    UP000001070    UP000000803    UP000075920    UP000008744    UP000000305    UP000075884    UP000002282    UP000268350    UP000007062    UP000007798    UP000007801    UP000008711    UP000075886    UP000000673    UP000001292    UP000079169   

PRIDE

H9JKQ9    O77069    Q8IMG6    Q7KPL1    O76259    O62609    + More

Pfam

PF03166   MH2        + More
PF03165   MH1

Interpro

IPR036578   SMAD_MH1_sf        + More
IPR013790   Dwarfin       
IPR008984   SMAD_FHA_dom_sf       
IPR017855   SMAD-like_dom_sf       
IPR013019   MAD_homology_MH1       
IPR001132   SMAD_dom_Dwarfin-type       
IPR003619   MAD_homology1_Dwarfin-type       

SUPFAM

SSF56366   SSF56366        + More
SSF49879   SSF49879       

Gene 3D

2.60.200.10     3.90.520.10    

ProteinModelPortal

H9JKQ9   A0A2W1CJJ7   A0A2A4JH37   A0A220QT57   A0A2A4JHI9   A0A2H1W0N3   + More
A0A194PNF4   A0A194RR97   A0A212EUG5   W8CCH4   V9ILV6   A0A290Y216   A0A158NWM7   A0A143WDL7   A0A067R1V3   T1P7I9   A0A1W4X564   U5EPY5   A0A1B6CWR8   D6W7L5   A0A139WP52   A0A1B6LR12   A0A1B6MED3   Q6PUB0   A0A154NZX7   N6TG83   A0A2M4BJ65   A0A1D2NIG9   E9IMX2   A0A2J7QI80   A0A088AF28   A0A195AZ55   A0A1L8DM78   A0A2A3ET95   A0A151J4K9   F4X067   A0A0C9R1S7   A0A151JWE9   A0A1L8DLR9   A0A026X2I2   A0A2J7QI47   A0A0C9QJQ6   A0A0P5EPJ9   A0A2J7QI55   A0A0J7P5Y5   A0A2J7QI57   A0A3L8DPI0   A0A195D1K5   A0A0P5F4U1   A0A0N7ZP95   I5AND6   A0A0P5TWS1   A0A146L531   A0A232FJQ7   A0A182LG83   A0A0P4YLU0   A0A146LYN4   A0A0N8CLW4   A0A1J1IHW5   A0A146M0Y8   A0A0P5Y6K5   A0A0Q9WZ20   A0A182VJA5   E2A8L7   A0A1I8Q8R9   A0A224XAD9   F8V239   O77069   B4JH81   Q8IMG6   A0A182VRN2   A0A0N8A5N2   B4G2C1   E9GJB7   A0A182N546   B4K7Y4   A0A0P5N804   A0A0R1E6M9   A0A3B0JIG4   Q29AF0   Q7QD16   A0A0Q9WSX5   A0A0P5UQ31   A0A0K8WJQ9   A0A034WME3   Q7KPL1   F7IWH2   A0A1I8Q8U4   B3MSY9   B3P525   A0A182QJ24   A0A1I8Q8S1   W5JA32   B4IJ10   A0A2M4AIU8   O76259   A0A3Q0ITD0   A0A2M3Z693   O62609   A0A2M4BEP2  

PDB

5C4V     E-value=4.71193e-99,     Score=920

KEGG

101745398    K04501 mothers against decapentaplegic homolog 4 | (RefSeq) mothers against decapentaplegic homolog

GO

GO:0003677   GO:0007179   GO:0005737   GO:0005634   GO:0005667   GO:0003700   GO:0006355   GO:0042078   GO:0030718   GO:0007476   GO:0030707   GO:0030509   GO:0009950   GO:0008283   GO:0031290   GO:0007480   GO:0045705   GO:0009953   GO:0035019   GO:0048666   GO:0007507   GO:0045887   GO:0000977   GO:0001228   GO:0045944   GO:0005622   GO:0005515   GO:0005886   GO:0007155   GO:0006811   GO:0006032   GO:0016021   GO:0004672   GO:0048384  

PANTHER

PTHR13703  

Subcellular location

Cytoplasm  
Nucleus  

Length:

247

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0064

Exp number, first 60 AAs:

0.0002

Total prob of N-in:

0.02494

outside

1  -  247

 

 

Pi

199.77948

Theta

179.337479

Tajima's D

0.408734

CLR

0.67818

CSRT

0.485875706214689

Interpretation

Uncertain