SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04017
Pre Gene Modal
BGIBMGA010113
Annotation
PREDICTED:_uncharacterized_protein_LOC101737032_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.767
 

Sequence

CDS
ATGGTTCTACACGTTACTAACATGTGCTGTGGAATCAAATTACGCACTATATGTTTCGTCATCGCTTATCTGCATTTGGTGTCTTGTGTCTTGGATATAGCGTTTCATTTGCTGACAGTTGCTATTGTCACTGATGGCTTCCAGTGCGACGTTAATTACGATAAGTTCAGCGCTATACCCTGGGCGGTTGTGGAGCCTTTACTCCTGGTTCTAAACCTCGGAACCCACGGCTTCTACCCATTCCCGGGGACATTTAGGCGTCAGTACAATATGTATGTTGAGTACACATCGATTATCGCAGAGCCCAGATGCTATCCCGGTATTCTCCACGTGTACCTGGTTGACATCCTCAATTTTCTCATTAATCTGATTTGGTTGAGGATTGTCGTGTCCTATTTGGGAGCATTATATAAGAGAAATCCCGAACCGATGCGAATGTTCCTCAGCCTCTCCATAGTAAAGGTCGTGATGCAAATCATTTATTTCGGATACCAACCGCATTTCTTCGATATATTCGGTAATGAAACTTACTGGTTCCTGAAACTCCTTGACATATTCATCGCCGTTGTCTTCATTACAATCATTCAGAAATACACAAAAGCACTGCGCTTGGAAAGGGCAACTGGTATCTCAGAGAAGCCCCCTTCTTACGTCGAATGCCTGATCAACGCAAGCCTCCAAGGTTTCCAAAGGAGTCCACCGAAGAAAGAACAGGTCATCGACATCGATGAGAAGAAAACTGTAGAGAAACAGAATGTAGAGAGTCCTGCTTAG
Protein
MVLHVTNMCCGIKLRTICFVIAYLHLVSCVLDIAFHLLTVAIVTDGFQCDVNYDKFSAIPWAVVEPLLLVLNLGTHGFYPFPGTFRRQYNMYVEYTSIIAEPRCYPGILHVYLVDILNFLINLIWLRIVVSYLGALYKRNPEPMRMFLSLSIVKVVMQIIYFGYQPHFFDIFGNETYWFLKLLDIFIAVVFITIIQKYTKALRLERATGISEKPPSYVECLINASLQGFQRSPPKKEQVIDIDEKKTVEKQNVESPA

Summary

Ontologies

Topology

Length:
257
Number of predicted TMHs:
5
Exp number of AAs in TMHs:
103.1447
Exp number, first 60 AAs:
25.26021
Total prob of N-in:
0.99138
POSSIBLE N-term signal
sequence
inside
1  -  20
TMhelix
21  -  43
outside
44  -  57
TMhelix
58  -  80
inside
81  -  107
TMhelix
108  -  130
outside
131  -  144
TMhelix
145  -  164
inside
165  -  176
TMhelix
177  -  196
outside
197  -  257
 
 

Population Genetic Test Statistics

Pi
267.826338
Theta
186.863804
Tajima's D
1.592456
CLR
0.526027
CSRT
0.806609669516524
Interpretation
Uncertain
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