Gene

KWMTBOMO03997

Pre Gene Modal

BGIBMGA010122

Annotation

PREDICTED:_acidic_amino_acid_decarboxylase_GADL1-like_[Amyelois_transitella]

Location

Bomo_Chr7(-):8012982-8021400      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 3.275

CDS

ATGGATTTATCTTTCCTGGACAGAGTGCTCCAAATAGTAAAAGATGAAAGAAAAAAAGATGTACCGCTTGTACGTTTTAAGCATCCTGAAGAGTTAGAGGCCATTCTAGACTTGGACATTGGTCAGGAAGTGAACGATGATGACCTGGAGCGGTGTGTTAGACAAGTCTTACAGTACAGCGTCAAAACAGATAAGGCAACGTTCAAAAACCAGTTATATGGCTGCACTGATCCATATGGACTGGCCGGCGCTTGGATAGCTGAGGCTTTTAACACTAGCCAATACACGTTCGAGGTAGCACCAGTCTTCACCCTAATAGAGCTCAAAGTTTTGAACCATATTCTCAATTTGTTCGGAATCCCAAACGGTGACGGTATATTTAGTCCTGGTGGTAGCGTTTCAATGTTATATGCTCTGGTTGCAGCTAGATTTAAAGCTTTTCCCGAAGTCAAGAGGAAAGGCATGAGAAACTTACCGGAGATGGTCATTTTTACTTCTGAAGACAGCCACTACTCAATCAGAAAAGCTGCGCATTGGTTAGGATTCGGAACAGAGAGCCTTCGTCCCATAAAGGCGAATGAACACGGGCAAATGATTGTAAGTGAACTTGAAAAGGCTATAGAAAGAGAAAAAAAAGAAAACAGATATCCAGTATTGGTTAATGCCACTGCTGGTACCACCGTCCTGGGCGCTATTGATGATTTGAATGACATAGCTAATGTTTGTAAGAAGCATGGCGTTTGGATGCACGTTGATGCTTGTTGGGGCGGTAGTTTGATGCTGTCGCCTAAATACCGAAGCAAATTACTGGGAGTTAAAAGGGCCGATTCTATATCTTGGAATCCTCACAAAATGGCCGGCGCACCTCTGCAGTGTTCCGTATTTCTTATCAAAGAACGTGGGTTGCTTCACGAAGCTAATTCTGCAGCGGCTCAGTACCTGTTTCAACAGGATAAGTTTTATGACGTTTCGTATGATACAGGCGACAAAAGTGTTCAGTGTGGAAGAAAGATAGACGCGTTTAAACTCTGGATGATGTGGAAATCTCGTGGAGACATTGGACTTAGTGTGCTAACCGACAAAGTCATGAGCATAGCACAGTTCTGTTTAAGTGCCACTTCGAAAATGGAGGGTTTCCGATTGGTTTCTGAAAAACTGCAATGCCCTAACGTGTGTTTTTGGTACATTCCTAAATTTATGAGGAATAAAGACGAGAACGAAGAGTGGTGGGATCTAATGCACAAGATAACACCAAAAATTAAAGAGCAGCTGACATTGACTTCGAAACTGATGGTAGCTTACTCGCCGCTACGACAGCACAAGAATTTCTTTCGACTGGCCTTTACTTTCCATCCAGAACTAAATGAAAATCAAGTAATAGAAATGCTTAATGCAGTGAAGTTATCCGGCGAAGCGATCACCAAGGAGATGTTCCCGTAA

Protein

MDLSFLDRVLQIVKDERKKDVPLVRFKHPEELEAILDLDIGQEVNDDDLERCVRQVLQYSVKTDKATFKNQLYGCTDPYGLAGAWIAEAFNTSQYTFEVAPVFTLIELKVLNHILNLFGIPNGDGIFSPGGSVSMLYALVAARFKAFPEVKRKGMRNLPEMVIFTSEDSHYSIRKAAHWLGFGTESLRPIKANEHGQMIVSELEKAIEREKKENRYPVLVNATAGTTVLGAIDDLNDIANVCKKHGVWMHVDACWGGSLMLSPKYRSKLLGVKRADSISWNPHKMAGAPLQCSVFLIKERGLLHEANSAAAQYLFQQDKFYDVSYDTGDKSVQCGRKIDAFKLWMMWKSRGDIGLSVLTDKVMSIAQFCLSATSKMEGFRLVSEKLQCPNVCFWYIPKFMRNKDENEEWWDLMHKITPKIKEQLTLTSKLMVAYSPLRQHKNFFRLAFTFHPELNENQVIEMLNAVKLSGEAITKEMFP

Cofactor

pyridoxal 5'-phosphate

Similarity

Belongs to the group II decarboxylase family.

Uniprot

H9JKS1   A0A2A4IXG0   A0A2H1WSR1   A0A212EIC8   A0A194Q5Q5   G8FGR5   + More
A0A0L7LNT1   A0A2W1BPM2   A0A194RPJ8   A0A2J7QJZ8   A0A1L8DZH3   A0A182R191   A0A1B6C9U7   E2B321   D6W6V9   A0A224XFL1   A0A1B6J8Y7   T1P8C2   A0A026WB08   A0A0L0BWX0   A0A1I8NI21   A0A182HT47   A0A023EU56   A0A182NFF7   A0A182UQX2   A0A182XI63   E0VPJ6   A0A182TWU3   Q7QC33   U5EI88   A0A182LF88   A0A182IQ24   A0A182VX91   A0A182GGT9   A0A084VVX2   A0A182R9W4   A0A182GN87   A0A182P725   A0A1I8Q5Q3   A0A1B0FPY6   A0A182F703   A0A1A9XY60   A0A182LSW6   A0A154PGW2   A0A1S4FRR5   A0A182TAP6   A0A088AEW8   K7J4N8   A0A0A9Z685   A0A310SA80   A0A1A9UFW8   A0A0K8SZE9   A0A1B0BNF2   A0A158P0F7   A0A182XX13   A0A0A8J1X6   W5JTP0   B4IWX4   A0A232FDA5   A0A0L7QKR6   F4W963   A0A221J378   K1QVC1   B0W3J9   A0A195F364   A0A067QTL9   C3XSS1   B4KY21   A0A336MLM2   E2AVJ9   A0A1B6EBR7   E9HGT8   A0A034W3S8   A0A195EDG9   T1HI09   A0A195B5L8   A0A0Q9XPE7   A0A165ACV4   A0A3L8DQE1   A0A0K8W632   A0A0Q9WLI6   B4LGF1   W8BDX1   A0A0Q9WRV4   A0A2R2MNC9   A0A0P5HKG1   A0A0A1X6M2   E9HGU1   A0A0P6BEL3   A0A0M4EL78   A0A0A1XT60   A0A0P6H5E6   B4PFA5   Q16RI0   A0A1L8DZC2   B4IT95   A0A1L8DZF2   B4IA86   A0A151IF44   A0A0P5SN71  

Pubmed

19121390    22118469    26354079    22234245    26227816    28756777    + More
20798317    18362917    19820115    24508170    26108605    25315136    24945155    20566863    12364791    14747013    17210077    20966253    26483478    24438588    17510324    20075255    25401762    26823975    21347285    25244985    20920257    23761445    17994087    28648823    21719571    28710376    22992520    24845553    18563158    21292972    25348373    30249741    24495485    26383154    25830018    17550304   

EMBL

BABH01011629    NWSH01005147    PCG64401.1    ODYU01010790    SOQ56109.1    AGBW02014660    + More
OWR41263.1    KQ459582    KPI98730.1    JN003848    AEQ77284.1    JTDY01000435    KOB77178.1    KZ149940    PZC76928.1    KQ460075    KPJ17946.1    NEVH01013547    PNF28910.1    GFDF01002255    JAV11829.1    AXCN02000214    GEDC01027032    JAS10266.1    GL445255    EFN89907.1    KQ971307    EFA11468.2    GFTR01006602    JAW09824.1    GECU01012066    JAS95640.1    KA644864    AFP59493.1    KK107293    EZA53245.1    JRES01001216    KNC24538.1    APCN01000411    GAPW01001162    JAC12436.1    DS235366    EEB15302.1    AAAB01008859    EAA07530.4    GANO01002724    JAB57147.1    JXUM01062334    JXUM01062335    KQ562195    KXJ76438.1    ATLV01017333    KE525162    KFB42116.1    JXUM01075999    KQ562918    KXJ74848.1    CCAG010001381    AXCM01006654    KQ434902    KZC11083.1    AAZX01010313    GBHO01006289    GBHO01006286    GDHC01011874    GDHC01008278    JAG37315.1    JAG37318.1    JAQ06755.1    JAQ10351.1    KQ780658    OAD51941.1    GBRD01007194    JAG58627.1    JXJN01017348    ADTU01000986    AB970772    BAQ00225.1    ADMH02000177    ETN67491.1    CH916366    EDV97375.1    NNAY01000386    OXU28751.1    KQ414940    KOC59160.1    GL888002    EGI69245.1    KY418037    ASM60752.1    JH817402    EKC37548.1    DS231832    EDS31785.1    KQ981855    KYN34903.1    KK852969    KDR13120.1    GG666459    EEN68992.1    CH933809    EDW18723.1    UFQT01001478    SSX30725.1    GL443122    EFN62550.1    GEDC01001974    JAS35324.1    GL732643    EFX69017.1    GAKP01009975    JAC48977.1    KQ979039    KYN23270.1    ACPB03005850    KQ976598    KYM79565.1    KRG06337.1    LRGB01000626    KZS17466.1    QOIP01000005    RLU22472.1    GDHF01005728    JAI46586.1    CH940647    KRF84934.1    EDW70480.2    GAMC01015184    JAB91371.1    KRF84935.1    GDIQ01226710    JAK25015.1    GBXI01007323    JAD06969.1    EFX69020.1    GDIP01030500    JAM73215.1    CP012525    ALC44160.1    GBXI01000157    JAD14135.1    GDIQ01024266    JAN70471.1    CM000159    EDW95191.1    KRK02282.1    CH477709    EAT37009.1    GFDF01002254    JAV11830.1    CH891674    EDW99608.1    KRK05158.1    GFDF01002270    JAV11814.1    CH480826    EDW44199.1    KQ977800    KYM99563.1    GDIP01137626    JAL66088.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053268    UP000037510    UP000053240    + More
UP000235965    UP000075886    UP000008237    UP000007266    UP000053097    UP000037069    UP000095301    UP000075840    UP000075884    UP000075903    UP000076407    UP000009046    UP000075902    UP000007062    UP000075882    UP000075880    UP000075920    UP000069940    UP000249989    UP000030765    UP000075900    UP000075885    UP000095300    UP000092444    UP000069272    UP000092443    UP000075883    UP000076502    UP000075901    UP000005203    UP000002358    UP000078200    UP000092460    UP000005205    UP000076408    UP000000673    UP000001070    UP000215335    UP000053825    UP000007755    UP000005408    UP000002320    UP000078541    UP000027135    UP000001554    UP000009192    UP000000311    UP000000305    UP000078492    UP000015103    UP000078540    UP000076858    UP000279307    UP000008792    UP000085678    UP000092553    UP000002282    UP000008820    UP000001292    UP000078542   

PRIDE

H9JKS1   

Pfam

PF00282   Pyridoxal_deC

Interpro

IPR015424   PyrdxlP-dep_Trfase        + More
IPR002129   PyrdxlP-dep_de-COase       
IPR015421   PyrdxlP-dep_Trfase_major       
IPR021115   Pyridoxal-P_BS       
IPR015422   PyrdxlP-dep_Trfase_dom1       

SUPFAM

SSF53383   SSF53383       

Gene 3D

3.40.640.10     3.90.1150.10    

ProteinModelPortal

H9JKS1   A0A2A4IXG0   A0A2H1WSR1   A0A212EIC8   A0A194Q5Q5   G8FGR5   + More
A0A0L7LNT1   A0A2W1BPM2   A0A194RPJ8   A0A2J7QJZ8   A0A1L8DZH3   A0A182R191   A0A1B6C9U7   E2B321   D6W6V9   A0A224XFL1   A0A1B6J8Y7   T1P8C2   A0A026WB08   A0A0L0BWX0   A0A1I8NI21   A0A182HT47   A0A023EU56   A0A182NFF7   A0A182UQX2   A0A182XI63   E0VPJ6   A0A182TWU3   Q7QC33   U5EI88   A0A182LF88   A0A182IQ24   A0A182VX91   A0A182GGT9   A0A084VVX2   A0A182R9W4   A0A182GN87   A0A182P725   A0A1I8Q5Q3   A0A1B0FPY6   A0A182F703   A0A1A9XY60   A0A182LSW6   A0A154PGW2   A0A1S4FRR5   A0A182TAP6   A0A088AEW8   K7J4N8   A0A0A9Z685   A0A310SA80   A0A1A9UFW8   A0A0K8SZE9   A0A1B0BNF2   A0A158P0F7   A0A182XX13   A0A0A8J1X6   W5JTP0   B4IWX4   A0A232FDA5   A0A0L7QKR6   F4W963   A0A221J378   K1QVC1   B0W3J9   A0A195F364   A0A067QTL9   C3XSS1   B4KY21   A0A336MLM2   E2AVJ9   A0A1B6EBR7   E9HGT8   A0A034W3S8   A0A195EDG9   T1HI09   A0A195B5L8   A0A0Q9XPE7   A0A165ACV4   A0A3L8DQE1   A0A0K8W632   A0A0Q9WLI6   B4LGF1   W8BDX1   A0A0Q9WRV4   A0A2R2MNC9   A0A0P5HKG1   A0A0A1X6M2   E9HGU1   A0A0P6BEL3   A0A0M4EL78   A0A0A1XT60   A0A0P6H5E6   B4PFA5   Q16RI0   A0A1L8DZC2   B4IT95   A0A1L8DZF2   B4IA86   A0A151IF44   A0A0P5SN71  

PDB

2JIS     E-value=1.33437e-122,     Score=1126

KEGG

101735396    no KO assigned | (RefSeq) acidic amino acid decarboxylase GADL1

GO

GO:0019752   GO:0030170   GO:0016831   GO:0004782   GO:0016829   GO:0003824   GO:0005216   GO:0006811   GO:0006032   GO:0016021   GO:0004672   GO:0048384  

Length:

479

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.284100000000001

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00221

outside

1  -  479

 

 

Pi

244.757165

Theta

186.015046

Tajima's D

0.899771

CLR

0.240397

CSRT

0.634518274086296

Interpretation

Uncertain