SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03991
Annotation
PREDICTED:_uncharacterized_protein_LOC106131495_isoform_X2_[Amyelois_transitella]
Location in the cell
PlasmaMembrane   Reliability : 2.075
 

Sequence

CDS
ATGGAGTTAGCTAAAGTGTGTTATGTCTGGTGTCTATTGTCATTTCTGCTGTTCCAATGTCTATTGGAAGGAACTGGTCAGCAGACATCGTTCGAACTACCAGTACAGTTGATAGGTTTCCCTTTCATCATCATGGCGGTGCGACTCACCAACTTTGTTAAGAAACTATCCTATGCTTTGAGCCCAGAGACGCCATTCGAATTACCGGTACAATTAGTTGGATTCCCTTTTATCGTGACCAGTGTTAAGTTGACGAATTTCTTGAAGAAGCTGTCATATTCTTTAAGTCCAGCGACATACCGGTCTCGGAGTCGCCGTGAGTTGTTGCTAACGGACCCAGCCGAGCCCTTCGATGTCGTAGAAGTGGAGAAATACATAGTGGGCGAGTTCGGTGCCAAAGCTTGCGTGTTCGAACGTGTATGCGCGCACTATGCGACCAGGGCGCGAACGCAACCGCGGCCTCAACTTGACTGGCCAGATGTTTTCAGTCAATACAAGCGCTCTCCGGATCAAGCCAAAGAATATTATTTGCTGAGCGTGTTCCTAGGAGACATCGTGGGCTCACCCACATTATGCCATCAGCTTGGTAAGCGAATGAACTGCGACACCCAACAGTTCGGAATATAA
Protein
MELAKVCYVWCLLSFLLFQCLLEGTGQQTSFELPVQLIGFPFIIMAVRLTNFVKKLSYALSPETPFELPVQLVGFPFIVTSVKLTNFLKKLSYSLSPATYRSRSRRELLLTDPAEPFDVVEVEKYIVGEFGAKACVFERVCAHYATRARTQPRPQLDWPDVFSQYKRSPDQAKEYYLLSVFLGDIVGSPTLCHQLGKRMNCDTQQFGI

Summary

EMBL
BABH01011612    NWSH01002633    PCG67795.1    ODYU01005129    SOQ45693.1    RSAL01000155    + More
RVE45646.1    KQ460930    KPJ10726.1    KQ459167    KPJ03508.1    KQ434827    KZC07648.1    GBYB01006718    JAG76485.1    KQ414775    KOC61295.1    KQ435794    KOX73766.1    GL448504    EFN84549.1    KQ980581    KYN15369.1    KQ981673    KYN38274.1    GL888932    EGI57281.1    KQ978219    KYM96428.1    KK107372    EZA51758.1    GEZM01056392    JAV72701.1    QOIP01000004    RLU24226.1    CVRI01000047    CRK97907.1    AAAB01008807    EAA04585.3    KQ973148    KYB29920.1    APCN01000213    AJWK01012240    AJWK01012241    AJWK01012242    AXCM01013404    AXCN02000893    DS235127    EEB12279.1    ABLF02038708    GGFL01006591    MBW70769.1    JTDY01004269    KOB68357.1    CH477336    EAT43207.1    JRES01000760    KNC28591.1    GGMR01017375    MBY29994.1    CCAG010010747    JXJN01015034    JXJN01015035    JXJN01015036    CP012525    ALC45013.1    CH902618    EDV41057.1    UFQS01000322    UFQT01000322    SSX02871.1    SSX23238.1    CH933809    EDW19078.1    CH940647    EDW70696.1    OUUW01000002    SPP77028.1    CH379069    EAL29708.1    CH916366    EDV97884.1    CH964095    EDW78943.1    CH954178    EDV51882.1    CM000159    EDW94630.1    GBXI01016827    GBXI01001780    JAC97464.1    JAD12512.1    AE014296    AY071344    AY113426    AAF49272.1    AAL48966.1    AAM29431.1    CM000363    CM002912    EDX10943.1    KMZ00376.1    GAKP01020842    GAKP01020840    JAC38110.1    CH480834    EDW46493.1    GDHF01008073    JAI44241.1    GAMC01010824    JAB95731.1    KQ983227    KYQ46486.1    KQ976540    KYM81286.1    AJVK01012112   
Pfam
PF00089   Trypsin
Interpro
IPR001254   Trypsin_dom        + More
IPR009003   Peptidase_S1_PA       
SUPFAM
SSF50494   SSF50494       

Ontologies

Topology

SignalP
Position:   1 - 26,         Likelihood:  0.918605
 
 
Length:
208
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
28.73747
Exp number, first 60 AAs:
25.99386
Total prob of N-in:
0.71055
POSSIBLE N-term signal
sequence
outside
1  -  208
 
 

Population Genetic Test Statistics

Pi
257.383421
Theta
172.206922
Tajima's D
1.377154
CLR
0.180431
CSRT
0.755362231888406
Interpretation
Uncertain
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