Gene

KWMTBOMO03985

Pre Gene Modal

BGIBMGA010252

Annotation

PREDICTED:_DNA_repair_protein_RAD51_homolog_3_[Amyelois_transitella]

Location

Bomo_Chr7(+):7552481-7561360      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.178 PlasmaMembrane   Reliability : 1.233

CDS

ATGAGTAATTATAAAATCCATACTGCAACGGAATTGTGGCAGAAAGAAACCTGTTTACCATCCATTCCAACATTTAGTCAGAACTTAGATCATATTCTAGGGAATGGTGGAGTGCAATTAGGCTCACTCACAGAGGTACTTGGTCTTCCTGGTACAGGAAAAACACAGTTGTGTTTACAGCTCTGTGCTTCAGTACAAATACCAAAAGTTTTAAGCGGATTGAATGCAGAGGCACTGTATATAGACACTAACACAAACTTTACACCAACCAGGTTTAAAGAAATTTTAACTGCAAGCTTATTAAAATGTCAAAAGATAGAACCATCATATTTGTTCAATGAAGAAGAGGCATTGGACAGACTACATTACATTAATGCATTTGGGATTGAGAAATTTTGTGCATGTATGAACAGAATTTCAGTTTTTGTAGCAGAACATCCTAGAGTTAAATTAATAGTTATTGATTCGATAACATTTCCATTCAAAGAAGGGATATCAGTGCAAAAGAGAACTGGACTGTTATTTCGTCAAATGGCTGATTTACAGAGGATAGCCATGGAAGGCCTGGTGGCAGTGGTGCTGGTAAATGAGATGAGCACAAGATTGGGTTTGTCCGGTGGTGCTGTGGTGGGCTCGTTGGGCGACGCCTGGGCCCATCGTTGCAACAAACGGTTACTGTTGTCCAATCCGAGTGAATTGGGTGGAAGCAGGCTAGCACTACTACTTAAAAGTAATAACGCACCAAATTTAGTTGCAAAGTTTCAGATAACAAGAGAAGGAATAAGGGATTCATAA

Protein

MSNYKIHTATELWQKETCLPSIPTFSQNLDHILGNGGVQLGSLTEVLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFVAEHPRVKLIVIDSITFPFKEGISVQKRTGLLFRQMADLQRIAMEGLVAVVLVNEMSTRLGLSGGAVVGSLGDAWAHRCNKRLLLSNPSELGGSRLALLLKSNNAPNLVAKFQITREGIRDS

Uniprot

A0A2A4JB79   A0A194QD93   A0A212EY95   A0A3S2ND37   A0A2H1WNX0   A0A146LZB4   + More
A0A0A9WB35   A0A067RU08   A0A0P4VL44   W4Z278   Q5XJT2   A0A2Z5TRT6   A0A0L0HGZ2   A0A0P7V2U8   A0A3B4V7D9   V9KU25   A0A2T7PHV6   R4LCC6   A0A2U9C2N9   F1QQC9   H2ZS27   A0A3Q3M2W0   A0A2C9LA23   A0A0A1X5V2   A0A3B4WRL0   A0A210Q0P7   A0A1B6HML4   A0A034WVC2   T1D9D3   A0A2D4L7Z3   A0A0V0GB42   A0A0K8VB09   A0A0L8FWN0   A0A2D4HEI4   A0A3Q2YJP1   W5LZC5   A0A2P6NNZ7   A0A224XVV3   K7G3U0   A0A3B3SVE9   A0A3B3SUU2   C1FDH7   A0A397TQJ0   A0A093F165   A0A0F7ZBI2   A0A151N5Y8   A0A397ISU2   A0A091JWK0   C1MGU0   A0A091P6Y6   A0A091IUE1   A0A093HME5   A0A3Q1IZ37   A0A0A0ABE6   A0A3P9K174   A0A091SFP9   A0A3B4DY24   A0A091FV54   A0A3B3ZFQ8   A0A094LBR9   A0A3P9I8Q0   B0XGX6   A0A091VPE1   A0A3Q3FPB0   A0A093QC13   A0A2Z6RWP1   A0A099Z6G3   G1N5G5   A0A1S8VT54   A0A091RWZ7   A0A2R7W9U4   A0A093BXR6   A0A091TU91   A0A1L8HG81   A0A091NKD4   A0A091RDD3   A0A093NGW6   A0A091LWE8   U3J4Q1   A0A087R017   G3N505   A0A2H5RFQ8   A0A091HX46   A0A091VQL3   A0A2H5RFR2   A0A1S3RK58   A0A3B4ZWM2   H2N0C6   A0A3Q0H5K8   A0A1V4K2A1   H0ZAM4   A0A2P6LAE4   A0A3Q3JLD9   A0A0Q3QYW0   T1J2H1   Q5FW49   A0A1Q3EWI4   A0A3L8S5I9  

Pubmed

26354079    22118469    26823975    25401762    24845553    27129103    + More
26760975    24402279    23594743    9215903    15562597    25830018    28812685    25348373    23758969    29378020    17381049    29240929    19359590    22293439    17554307    25463417    20838655    27762356    23749191    24277808    30271968    29355972    20360741    30282656   

EMBL

NWSH01002120    PCG69109.1    KQ459167    KPJ03513.1    AGBW02011577    OWR46463.1    + More
RSAL01000202    RVE44402.1    ODYU01009909    SOQ54642.1    GDHC01005708    GDHC01003093    JAQ12921.1    JAQ15536.1    GBHO01037957    JAG05647.1    KK852463    KDR23329.1    GDKW01003512    JAI53083.1    AAGJ04089350    AAGJ04089351    AAGJ04089352    BC083214    BC164186    AAH83214.1    AAI64186.1    FX985790    BBA93677.1    KQ257456    KND00383.1    JARO02001499    KPP75301.1    JW869479    AFP01997.1    PZQS01000004    PVD33003.1    KC119409    KC119410    AGL11960.1    CP026253    AWP09916.1    CR855192    CT573240    AFYH01004143    AFYH01004144    AFYH01004145    GBXI01008177    JAD06115.1    NEDP02005302    OWF42239.1    GECU01031881    JAS75825.1    GAKP01000363    JAC58589.1    GAAZ01001994    JAA95949.1    IACL01119086    LAB17056.1    GECL01000933    JAP05191.1    GDHF01016278    JAI36036.1    KQ425681    KOF69118.1    IACK01015040    LAA70373.1    AHAT01005597    MDYQ01000041    PRP85681.1    GFTR01004193    JAW12233.1    AGCU01199664    AGCU01199665    CP001574    ACO68392.1    QKYT01000031    RIA97301.1    KK380236    KFV48001.1    GBEX01002736    JAI11824.1    AKHW03004004    KYO32246.1    PQFF01000143    RHZ79069.1    KK532138    KFP28338.1    GG663735    EEH60630.1    KK668493    KFQ02958.1    KK501002    KFP11922.1    KL206227    KFV80177.1    KL871238    KGL91386.1    KK469725    KFQ56840.1    KL447514    KFO74395.1    KL278082    KFZ66907.1    DS233075    EDS27895.1    KL409726    KFQ91543.1    KL672574    KFW86513.1    BEXD01004148    GBC07498.1    KL890678    KGL78024.1    LYON01000771    OON05500.1    KK934848    KFQ46689.1    KK854512    PTY16464.1    KL235278    KFV08495.1    KK464699    KFQ81105.1    CM004468    OCT95041.1    KL385920    KFP89921.1    KK813977    KFQ37531.1    KL224565    KFW61235.1    KK509839    KFP62679.1    ADON01037173    KL226004    KFM06821.1    BDIQ01000039    GBC16913.1    KL217847    KFO99739.1    KK734272    KFR05509.1    AUPC02000018    GBC16912.1    POG80325.1    LSYS01005108    OPJ78514.1    ABQF01026516    MWRG01000680    PRD35545.1    LMAW01002675    KQK78321.1    JH431806    BC089630    CR848081    AAH89630.1    CAJ81518.1    GFDL01015385    JAV19660.1    QUSF01000062    RLV97066.1   

Proteomes

UP000218220    UP000053268    UP000007151    UP000283053    UP000027135    UP000007110    + More
UP000053201    UP000034805    UP000192224    UP000261420    UP000245119    UP000246464    UP000000437    UP000008672    UP000261640    UP000076420    UP000261360    UP000242188    UP000053454    UP000264820    UP000018468    UP000241769    UP000007267    UP000261540    UP000002009    UP000265703    UP000050525    UP000266861    UP000001876    UP000053119    UP000053584    UP000265040    UP000053858    UP000265180    UP000261440    UP000053760    UP000261520    UP000265200    UP000002320    UP000053283    UP000261660    UP000053258    UP000247702    UP000053641    UP000001645    UP000189906    UP000186698    UP000054081    UP000016666    UP000053286    UP000007635    UP000236242    UP000054308    UP000053605    UP000018888    UP000087266    UP000261400    UP000001038    UP000189705    UP000190648    UP000007754    UP000261600    UP000051836    UP000276834   

Pfam

PF08423   Rad51

Interpro

IPR013632   DNA_recomb/repair_Rad51_C        + More
IPR020588   RecA_ATP-bd       
IPR027417   P-loop_NTPase       
IPR016467   DNA_recomb/repair_RecA-like       
IPR033925   Rad51_DMC1_RadA       
IPR010995   DNA_repair_Rad51/TF_NusA_a-hlx       
IPR003593   AAA+_ATPase       

SUPFAM

SSF52540   SSF52540        + More
SSF47794   SSF47794       

CDD

cd01123  Rad51_DMC1_radA

ProteinModelPortal

A0A2A4JB79   A0A194QD93   A0A212EY95   A0A3S2ND37   A0A2H1WNX0   A0A146LZB4   + More
A0A0A9WB35   A0A067RU08   A0A0P4VL44   W4Z278   Q5XJT2   A0A2Z5TRT6   A0A0L0HGZ2   A0A0P7V2U8   A0A3B4V7D9   V9KU25   A0A2T7PHV6   R4LCC6   A0A2U9C2N9   F1QQC9   H2ZS27   A0A3Q3M2W0   A0A2C9LA23   A0A0A1X5V2   A0A3B4WRL0   A0A210Q0P7   A0A1B6HML4   A0A034WVC2   T1D9D3   A0A2D4L7Z3   A0A0V0GB42   A0A0K8VB09   A0A0L8FWN0   A0A2D4HEI4   A0A3Q2YJP1   W5LZC5   A0A2P6NNZ7   A0A224XVV3   K7G3U0   A0A3B3SVE9   A0A3B3SUU2   C1FDH7   A0A397TQJ0   A0A093F165   A0A0F7ZBI2   A0A151N5Y8   A0A397ISU2   A0A091JWK0   C1MGU0   A0A091P6Y6   A0A091IUE1   A0A093HME5   A0A3Q1IZ37   A0A0A0ABE6   A0A3P9K174   A0A091SFP9   A0A3B4DY24   A0A091FV54   A0A3B3ZFQ8   A0A094LBR9   A0A3P9I8Q0   B0XGX6   A0A091VPE1   A0A3Q3FPB0   A0A093QC13   A0A2Z6RWP1   A0A099Z6G3   G1N5G5   A0A1S8VT54   A0A091RWZ7   A0A2R7W9U4   A0A093BXR6   A0A091TU91   A0A1L8HG81   A0A091NKD4   A0A091RDD3   A0A093NGW6   A0A091LWE8   U3J4Q1   A0A087R017   G3N505   A0A2H5RFQ8   A0A091HX46   A0A091VQL3   A0A2H5RFR2   A0A1S3RK58   A0A3B4ZWM2   H2N0C6   A0A3Q0H5K8   A0A1V4K2A1   H0ZAM4   A0A2P6LAE4   A0A3Q3JLD9   A0A0Q3QYW0   T1J2H1   Q5FW49   A0A1Q3EWI4   A0A3L8S5I9  

PDB

2ZUD     E-value=1.95152e-21,     Score=251

KEGG

101746445    no KO assigned | (RefSeq) DNA repair protein RAD51 homolog 3-like

GO

GO:0006281   GO:0005524   GO:0003677   GO:0008094   GO:0033065   GO:0033063   GO:0005657   GO:0007131   GO:0000722   GO:0010971   GO:0048476   GO:0005829   GO:0007066   GO:0005739   GO:0007141   GO:0000724   GO:0048471   GO:0030054   GO:0000400   GO:0008821   GO:0007283   GO:0005216   GO:0006811   GO:0006032   GO:0016021   GO:0004672   GO:0048384  

Length:

264

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.15484

Exp number, first 60 AAs:

0.00802

Total prob of N-in:

0.18185

outside

1  -  264

 

 

Pi

220.132436

Theta

168.086245

Tajima's D

0.71114

CLR

2.032098

CSRT

0.579921003949803

Interpretation

Uncertain