Gene
KWMTBOMO03984
Pre Gene Modal
BGIBMGA010131
Annotation
mediator_of_RNA_polymerase_II_transcription_subunit_29_[Bombyx_mori]
Full name
Mediator of RNA polymerase II transcription subunit 29
Alternative Name
Mediator complex subunit 29
Protein intersex
Protein intersex
Location in the cell
Nuclear Reliability : 3.175
Sequence
CDS
ATGAATATGCACGTACCAATGAACCAAGTTGCTGGAGCTCCAAATGTAGCCATGCAAATGCCTGTACCAGGACCCATAATGCAACAGCAATCTCCTCAACAAATGCAACCTGCACCAGTGCCTCAACAAACACAACAAGATAAAATGGACAATATATCTAAAGTGAAGTCTTTAATGGGATCCTTACGCGAATCTATACCGATGACACTTAAGTCTGCAGCCCAAATATTACACCAAAATCACAATGCAGACTCCAATACACAAAAAGGTATGGATAATCCTGTTCCTAGATTTGAAAAAAACTTAGAAGAGTTTTTCTCAATCTGTGATCAAATGGAACTACATTTGCGAACAGCAACAACGTGTATCCAGCAAGCGCAATCAGCCGCCCATTATCTGCCGCTCTCGGTGATAGCCTCAAGACTCGACTCTGGACCTACCACGCAGGAAACGACATTAAGCTATCCGCAATATTTGAAGACAGTTGGCCTCCAAATCTCATACGCGAAAGATATTCACGACACATTGGTCGCGGCTGCTCAGAATATATCACCGACCGAATGA
Protein
MNMHVPMNQVAGAPNVAMQMPVPGPIMQQQSPQQMQPAPVPQQTQQDKMDNISKVKSLMGSLRESIPMTLKSAAQILHQNHNADSNTQKGMDNPVPRFEKNLEEFFSICDQMELHLRTATTCIQQAQSAAHYLPLSVIASRLDSGPTTQETTLSYPQYLKTVGLQISYAKDIHDTLVAAAQNISPTE
Summary
Description
Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity).
Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). Required for female somatic sexual development.
Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). Required for female somatic sexual development.
Subunit
Component of the Mediator complex.
Component of the Mediator complex (By similarity). Self-associates. Interacts with dsx.
Component of the Mediator complex (By similarity). Self-associates. Interacts with dsx.
Similarity
Belongs to the Mediator complex subunit 29 family.
Keywords
Activator
Complete proteome
Nucleus
Reference proteome
Transcription
Transcription regulation
Differentiation
Sexual differentiation
Feature
chain Mediator of RNA polymerase II transcription subunit 29
Uniprot
Q5ISW3
H9JKT0
A0A212F9C4
D1FXH5
S4PE58
A0A2W1BTJ1
+ More
A0A2A4JCE6 A0A212EYE2 I4DRZ6 A0A194QDL7 A0A194QZ47 A0A1E1VXU3 A0A2H1WNJ2 A0A2J7R1R3 U5ENQ5 D6WGB4 A0A1L8DHV6 J3JXN4 E0VLZ6 A0A151WLJ4 A0A195CU88 E9IQ88 A0A195BME3 A0A158NTV0 A0A310SNM1 A0A067RAP0 A0A151JRB4 F4WJ46 A0A1W4WF40 A0A195FPC2 A0A1B6FEH1 A0A1B6DSI2 E2AIR6 A0A154PRF5 A0A1L8DHU5 A0A0L7R360 A0A0J7NZQ8 A0A1Y1MRT5 A0A0V0G9L1 A0A023FAL8 A0A0M8ZV81 A0A1Q3FA86 A0A2C9GUH5 A0A182VVZ0 A0A182RSB6 Q16TJ7 R4G8W8 B0WLM3 A0A182YHY7 A0A2M3ZD45 A0A182PRT7 A0A182JVF0 A0A182NQQ6 A0A2M4BZZ1 A0A2R7WEA2 W5J8M3 A0A182FS12 V5G8Z1 A0A2C9H4U6 A0A182X9E7 A0A182L8L7 A0A182HKD3 Q7PUD7 A0A182UTR6 T1I764 A0A182IU29 A0A2M4AZ50 A0A1B6KCK7 A0A0A9WP58 A0A0C9Q2H6 A0A2A3ECK8 A0A088A7B7 A0A026WWF2 Q16TJ8 G1JLS9 B4HNG7 B4KRG6 B4NSE0 Q7KBL8 H0RNF2 Q5ISW5 B4J8Y4 A0A3L8DBU1 A0A232FAQ9 K7J702 B4P6I1 A0A1W4U5J4 B4N0A7 Q28Y93 B3MFA7 B3NSH1 J9JSE4 A0A0C9R189 A0A034WAS4 A0A336LNC1 A0A3B0J043 C4WWG3 W8B7V7
A0A2A4JCE6 A0A212EYE2 I4DRZ6 A0A194QDL7 A0A194QZ47 A0A1E1VXU3 A0A2H1WNJ2 A0A2J7R1R3 U5ENQ5 D6WGB4 A0A1L8DHV6 J3JXN4 E0VLZ6 A0A151WLJ4 A0A195CU88 E9IQ88 A0A195BME3 A0A158NTV0 A0A310SNM1 A0A067RAP0 A0A151JRB4 F4WJ46 A0A1W4WF40 A0A195FPC2 A0A1B6FEH1 A0A1B6DSI2 E2AIR6 A0A154PRF5 A0A1L8DHU5 A0A0L7R360 A0A0J7NZQ8 A0A1Y1MRT5 A0A0V0G9L1 A0A023FAL8 A0A0M8ZV81 A0A1Q3FA86 A0A2C9GUH5 A0A182VVZ0 A0A182RSB6 Q16TJ7 R4G8W8 B0WLM3 A0A182YHY7 A0A2M3ZD45 A0A182PRT7 A0A182JVF0 A0A182NQQ6 A0A2M4BZZ1 A0A2R7WEA2 W5J8M3 A0A182FS12 V5G8Z1 A0A2C9H4U6 A0A182X9E7 A0A182L8L7 A0A182HKD3 Q7PUD7 A0A182UTR6 T1I764 A0A182IU29 A0A2M4AZ50 A0A1B6KCK7 A0A0A9WP58 A0A0C9Q2H6 A0A2A3ECK8 A0A088A7B7 A0A026WWF2 Q16TJ8 G1JLS9 B4HNG7 B4KRG6 B4NSE0 Q7KBL8 H0RNF2 Q5ISW5 B4J8Y4 A0A3L8DBU1 A0A232FAQ9 K7J702 B4P6I1 A0A1W4U5J4 B4N0A7 Q28Y93 B3MFA7 B3NSH1 J9JSE4 A0A0C9R189 A0A034WAS4 A0A336LNC1 A0A3B0J043 C4WWG3 W8B7V7
Pubmed
15645316
19121390
22118469
23622113
28756777
22651552
+ More
26354079 18362917 19820115 22516182 20566863 21282665 21347285 24845553 21719571 20798317 28004739 25474469 17510324 25244985 20920257 23761445 20966253 12364791 25401762 26823975 24508170 21996282 17994087 22936249 12361959 10731132 12537572 30249741 28648823 20075255 17550304 15632085 25348373 24495485
26354079 18362917 19820115 22516182 20566863 21282665 21347285 24845553 21719571 20798317 28004739 25474469 17510324 25244985 20920257 23761445 20966253 12364791 25401762 26823975 24508170 21996282 17994087 22936249 12361959 10731132 12537572 30249741 28648823 20075255 17550304 15632085 25348373 24495485
EMBL
AY648340
BABH01011594
BABH01011595
BABH01011596
AGBW02009594
OWR50356.1
+ More
FJ472974 FJ468396 ACS12898.1 GAIX01003306 JAA89254.1 KZ149940 PZC76944.1 NWSH01002120 PCG69110.1 AGBW02011577 OWR46464.1 AK405341 BAM20686.1 KQ459167 KPJ03514.1 KQ460930 KPJ10732.1 GDQN01011542 GDQN01001919 JAT79512.1 JAT89135.1 ODYU01009909 SOQ54643.1 NEVH01008202 PNF34774.1 GANO01000495 JAB59376.1 KQ971329 EFA01132.1 GFDF01008061 JAV06023.1 BT128004 AEE62966.1 DS235283 EEB14402.1 KQ982959 KYQ48759.1 KQ977279 KYN04092.1 GL764666 EFZ17260.1 KQ976435 KYM87058.1 ADTU01026164 KQ762343 OAD55937.1 KK852818 KDR15695.1 KQ978615 KYN29824.1 GL888181 EGI65816.1 KQ981382 KYN42308.1 GECZ01021157 JAS48612.1 GEDC01028691 GEDC01008662 JAS08607.1 JAS28636.1 GL439869 EFN66678.1 KQ435012 KZC13858.1 GFDF01008071 JAV06013.1 KQ414664 KOC65211.1 LBMM01000651 KMQ97885.1 GEZM01023373 GEZM01023371 JAV88422.1 GECL01001668 JAP04456.1 GBBI01000638 JAC18074.1 KQ435866 KOX70293.1 GFDL01010598 JAV24447.1 AXCM01002705 CH477648 GAHY01000247 JAA77263.1 DS231988 EDS30565.1 GGFM01005629 MBW26380.1 GGFJ01009508 MBW58649.1 KK854685 PTY17888.1 ADMH02002101 ETN59144.1 GALX01007997 JAB60469.1 APCN01000826 AAAB01008987 ACPB03006286 GGFK01012527 MBW45848.1 GEBQ01030794 JAT09183.1 GBHO01034383 GBRD01018208 GBRD01009738 GDHC01017714 GDHC01017253 JAG09221.1 JAG47619.1 JAQ00915.1 JAQ01376.1 GBYB01008193 JAG77960.1 KZ288296 PBC28939.1 KK107079 EZA60133.1 EAT37825.1 JN368475 AEM16993.1 CH480816 EDW47403.1 CH933808 EDW10392.1 CH982175 CM002911 EDX15518.1 KMY92987.1 AF491289 AE013599 BT028773 BT132874 AEV23898.1 AY648338 AY649563 CH940648 CH916367 EDW01333.1 QOIP01000010 RLU17814.1 NNAY01000580 OXU27570.1 CM000158 EDW90933.1 CH963920 EDW77520.1 CM000071 EAL26072.1 CH902619 EDV35581.1 CH954179 EDV56473.1 ABLF02038189 GBYB01000631 JAG70398.1 GAKP01007530 JAC51422.1 UFQT01000083 SSX19450.1 OUUW01000001 SPP73867.1 AK342051 BAH72233.1 GAMC01017249 JAB89306.1
FJ472974 FJ468396 ACS12898.1 GAIX01003306 JAA89254.1 KZ149940 PZC76944.1 NWSH01002120 PCG69110.1 AGBW02011577 OWR46464.1 AK405341 BAM20686.1 KQ459167 KPJ03514.1 KQ460930 KPJ10732.1 GDQN01011542 GDQN01001919 JAT79512.1 JAT89135.1 ODYU01009909 SOQ54643.1 NEVH01008202 PNF34774.1 GANO01000495 JAB59376.1 KQ971329 EFA01132.1 GFDF01008061 JAV06023.1 BT128004 AEE62966.1 DS235283 EEB14402.1 KQ982959 KYQ48759.1 KQ977279 KYN04092.1 GL764666 EFZ17260.1 KQ976435 KYM87058.1 ADTU01026164 KQ762343 OAD55937.1 KK852818 KDR15695.1 KQ978615 KYN29824.1 GL888181 EGI65816.1 KQ981382 KYN42308.1 GECZ01021157 JAS48612.1 GEDC01028691 GEDC01008662 JAS08607.1 JAS28636.1 GL439869 EFN66678.1 KQ435012 KZC13858.1 GFDF01008071 JAV06013.1 KQ414664 KOC65211.1 LBMM01000651 KMQ97885.1 GEZM01023373 GEZM01023371 JAV88422.1 GECL01001668 JAP04456.1 GBBI01000638 JAC18074.1 KQ435866 KOX70293.1 GFDL01010598 JAV24447.1 AXCM01002705 CH477648 GAHY01000247 JAA77263.1 DS231988 EDS30565.1 GGFM01005629 MBW26380.1 GGFJ01009508 MBW58649.1 KK854685 PTY17888.1 ADMH02002101 ETN59144.1 GALX01007997 JAB60469.1 APCN01000826 AAAB01008987 ACPB03006286 GGFK01012527 MBW45848.1 GEBQ01030794 JAT09183.1 GBHO01034383 GBRD01018208 GBRD01009738 GDHC01017714 GDHC01017253 JAG09221.1 JAG47619.1 JAQ00915.1 JAQ01376.1 GBYB01008193 JAG77960.1 KZ288296 PBC28939.1 KK107079 EZA60133.1 EAT37825.1 JN368475 AEM16993.1 CH480816 EDW47403.1 CH933808 EDW10392.1 CH982175 CM002911 EDX15518.1 KMY92987.1 AF491289 AE013599 BT028773 BT132874 AEV23898.1 AY648338 AY649563 CH940648 CH916367 EDW01333.1 QOIP01000010 RLU17814.1 NNAY01000580 OXU27570.1 CM000158 EDW90933.1 CH963920 EDW77520.1 CM000071 EAL26072.1 CH902619 EDV35581.1 CH954179 EDV56473.1 ABLF02038189 GBYB01000631 JAG70398.1 GAKP01007530 JAC51422.1 UFQT01000083 SSX19450.1 OUUW01000001 SPP73867.1 AK342051 BAH72233.1 GAMC01017249 JAB89306.1
Proteomes
UP000005204
UP000007151
UP000218220
UP000053268
UP000053240
UP000235965
+ More
UP000007266 UP000009046 UP000075809 UP000078542 UP000078540 UP000005205 UP000027135 UP000078492 UP000007755 UP000192223 UP000078541 UP000000311 UP000076502 UP000053825 UP000036403 UP000053105 UP000075883 UP000075920 UP000075900 UP000008820 UP000002320 UP000076408 UP000075885 UP000075881 UP000075884 UP000000673 UP000069272 UP000075902 UP000076407 UP000075882 UP000075840 UP000007062 UP000075903 UP000015103 UP000075880 UP000242457 UP000005203 UP000053097 UP000001292 UP000009192 UP000000304 UP000000803 UP000008792 UP000001070 UP000279307 UP000215335 UP000002358 UP000002282 UP000192221 UP000007798 UP000001819 UP000007801 UP000008711 UP000007819 UP000268350
UP000007266 UP000009046 UP000075809 UP000078542 UP000078540 UP000005205 UP000027135 UP000078492 UP000007755 UP000192223 UP000078541 UP000000311 UP000076502 UP000053825 UP000036403 UP000053105 UP000075883 UP000075920 UP000075900 UP000008820 UP000002320 UP000076408 UP000075885 UP000075881 UP000075884 UP000000673 UP000069272 UP000075902 UP000076407 UP000075882 UP000075840 UP000007062 UP000075903 UP000015103 UP000075880 UP000242457 UP000005203 UP000053097 UP000001292 UP000009192 UP000000304 UP000000803 UP000008792 UP000001070 UP000279307 UP000215335 UP000002358 UP000002282 UP000192221 UP000007798 UP000001819 UP000007801 UP000008711 UP000007819 UP000268350
Interpro
SUPFAM
SSF55455
SSF55455
Gene 3D
ProteinModelPortal
Q5ISW3
H9JKT0
A0A212F9C4
D1FXH5
S4PE58
A0A2W1BTJ1
+ More
A0A2A4JCE6 A0A212EYE2 I4DRZ6 A0A194QDL7 A0A194QZ47 A0A1E1VXU3 A0A2H1WNJ2 A0A2J7R1R3 U5ENQ5 D6WGB4 A0A1L8DHV6 J3JXN4 E0VLZ6 A0A151WLJ4 A0A195CU88 E9IQ88 A0A195BME3 A0A158NTV0 A0A310SNM1 A0A067RAP0 A0A151JRB4 F4WJ46 A0A1W4WF40 A0A195FPC2 A0A1B6FEH1 A0A1B6DSI2 E2AIR6 A0A154PRF5 A0A1L8DHU5 A0A0L7R360 A0A0J7NZQ8 A0A1Y1MRT5 A0A0V0G9L1 A0A023FAL8 A0A0M8ZV81 A0A1Q3FA86 A0A2C9GUH5 A0A182VVZ0 A0A182RSB6 Q16TJ7 R4G8W8 B0WLM3 A0A182YHY7 A0A2M3ZD45 A0A182PRT7 A0A182JVF0 A0A182NQQ6 A0A2M4BZZ1 A0A2R7WEA2 W5J8M3 A0A182FS12 V5G8Z1 A0A2C9H4U6 A0A182X9E7 A0A182L8L7 A0A182HKD3 Q7PUD7 A0A182UTR6 T1I764 A0A182IU29 A0A2M4AZ50 A0A1B6KCK7 A0A0A9WP58 A0A0C9Q2H6 A0A2A3ECK8 A0A088A7B7 A0A026WWF2 Q16TJ8 G1JLS9 B4HNG7 B4KRG6 B4NSE0 Q7KBL8 H0RNF2 Q5ISW5 B4J8Y4 A0A3L8DBU1 A0A232FAQ9 K7J702 B4P6I1 A0A1W4U5J4 B4N0A7 Q28Y93 B3MFA7 B3NSH1 J9JSE4 A0A0C9R189 A0A034WAS4 A0A336LNC1 A0A3B0J043 C4WWG3 W8B7V7
A0A2A4JCE6 A0A212EYE2 I4DRZ6 A0A194QDL7 A0A194QZ47 A0A1E1VXU3 A0A2H1WNJ2 A0A2J7R1R3 U5ENQ5 D6WGB4 A0A1L8DHV6 J3JXN4 E0VLZ6 A0A151WLJ4 A0A195CU88 E9IQ88 A0A195BME3 A0A158NTV0 A0A310SNM1 A0A067RAP0 A0A151JRB4 F4WJ46 A0A1W4WF40 A0A195FPC2 A0A1B6FEH1 A0A1B6DSI2 E2AIR6 A0A154PRF5 A0A1L8DHU5 A0A0L7R360 A0A0J7NZQ8 A0A1Y1MRT5 A0A0V0G9L1 A0A023FAL8 A0A0M8ZV81 A0A1Q3FA86 A0A2C9GUH5 A0A182VVZ0 A0A182RSB6 Q16TJ7 R4G8W8 B0WLM3 A0A182YHY7 A0A2M3ZD45 A0A182PRT7 A0A182JVF0 A0A182NQQ6 A0A2M4BZZ1 A0A2R7WEA2 W5J8M3 A0A182FS12 V5G8Z1 A0A2C9H4U6 A0A182X9E7 A0A182L8L7 A0A182HKD3 Q7PUD7 A0A182UTR6 T1I764 A0A182IU29 A0A2M4AZ50 A0A1B6KCK7 A0A0A9WP58 A0A0C9Q2H6 A0A2A3ECK8 A0A088A7B7 A0A026WWF2 Q16TJ8 G1JLS9 B4HNG7 B4KRG6 B4NSE0 Q7KBL8 H0RNF2 Q5ISW5 B4J8Y4 A0A3L8DBU1 A0A232FAQ9 K7J702 B4P6I1 A0A1W4U5J4 B4N0A7 Q28Y93 B3MFA7 B3NSH1 J9JSE4 A0A0C9R189 A0A034WAS4 A0A336LNC1 A0A3B0J043 C4WWG3 W8B7V7
Ontologies
KEGG
GO
Topology
Subcellular location
Nucleus
Length:
187
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00347
Exp number, first 60 AAs:
0.00325
Total prob of N-in:
0.13682
outside
1 - 187
Population Genetic Test Statistics
Pi
157.927321
Theta
154.266232
Tajima's D
0.353103
CLR
0.218954
CSRT
0.461476926153692
Interpretation
Uncertain
