Gene
KWMTBOMO03983
Pre Gene Modal
BGIBMGA010251
Annotation
microtubule-associated_protein_1_light_chain_3_[Bombyx_mori]
Full name
Autophagy-related protein
Location in the cell
Mitochondrial Reliability : 2.099
Sequence
CDS
ATGGAGCTAAATTTTATAACAACATTAATCAAACACGATGTTAATCACAACGTGAAACAGTGTTTCAAATCCAAAAAGCCATTTATTATCCGAAAAGAAGAAGTAATGGCAATCAAGAGTAAATTCCCCACCAAAATACCACTAATCGTTGAGCGATATCATAAAGAGAGAAATCTGCCAACACTGGACAAAAAAAAATTTTTAGTCCCGGAAGATATCACCATGTCTCAGTTTTTGGTTATCATCAGAAACAGGATCAGAGTCAAACCTAACCAAGCTTTATACCTAATCATCAATAACAGGTCGATGTTAAGTATGAGCCTCACAATGGCGCAAGCCTACGAAAACTATGGGGATGAAGATGGATTCCTTTACATCACCTACGCCTCTCAAGAGGTGTTCGGCTACCAGGATGATATGCAGGAAAAATCGAACCGCGAAGTAGAAGCCATTAGACACCGCTTCCCTAATAAAGTCCCGCTGTACGTGACCAGATACGTAAGAGATCGTGAGGTGCCAGTATTAGGGAGAACAAAGTTCTTAGTGCCACAGGAACTCACAATGTCGCAGTTTCTGTACATTATAAGAACAAAGATGAAACTCCGCGATTCACAGGCATTGTACTTGCTTGTGAACGACAAAGTTTTGGCGAGCCACAGTATGACGATGGCGCAGGCGTACCAGCAGTTCCGCTCTCACGATGGCTACCTGCATATCACTTATGCAGCACAACAAGTCTTCGGATGA
Protein
MELNFITTLIKHDVNHNVKQCFKSKKPFIIRKEEVMAIKSKFPTKIPLIVERYHKERNLPTLDKKKFLVPEDITMSQFLVIIRNRIRVKPNQALYLIINNRSMLSMSLTMAQAYENYGDEDGFLYITYASQEVFGYQDDMQEKSNREVEAIRHRFPNKVPLYVTRYVRDREVPVLGRTKFLVPQELTMSQFLYIIRTKMKLRDSQALYLLVNDKVLASHSMTMAQAYQQFRSHDGYLHITYAAQQVFG
Summary
Similarity
Belongs to the ATG8 family.
Uniprot
EMBL
Proteomes
Pfam
PF02991 Atg8
SUPFAM
SSF54236
SSF54236
CDD
ProteinModelPortal
PDB
3VVW
E-value=1.98083e-33,
Score=354
Ontologies
PANTHER
Topology
Subcellular location
Cytoplasm
Length:
248
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0375
Exp number, first 60 AAs:
0
Total prob of N-in:
0.01868
outside
1 - 248
Population Genetic Test Statistics
Pi
235.411508
Theta
157.341053
Tajima's D
0.800043
CLR
0.115502
CSRT
0.605969701514924
Interpretation
Uncertain
