Silkworm Genome Informatics Database

Gene

KWMTBOMO03982

Pre Gene Modal

BGIBMGA010132

Annotation

PREDICTED:_biotin--protein_ligase_[Bombyx_mori]

Location

Bomo_Chr7(-):7508862-7529320 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.387 Nuclear Reliability : 1.849

CDS

ATGAAACCAACACAGTGCATTGAAATCAGTGATTGGGTAACTTGTTCTGGAGGTATGCCACTTGGATCCAGTGATCAGTCTCCAGTGACTGATTTAGATGTTGACATCCTTTTTGAATGTGAAATGGATCCTCATGAAGATAGCAGTCCAAATGTTACAACTTTAGAGTCAATGGGACAACCTATTGCTTGGAAGGCTGGATCTCATCTGGCCATAGTCCTAAAAACTAACATTGAGCATCTCTCTGTGATTGGATTTCAATTTGTTGGTGGAGAATTTGTGATAGATCATAACTTGCCAGTTGTTAGGATACAAACCGTGCAAATATGTGGAGACCCTAATAAAGCTGTAGATGCATCAATGAGAAGCTTAAGAACTGACATTCAGAACAATCTTAAGAATCCCTTAGAGTTTCAGTGGTCGGTCCATGCAGCATTACTAAGGAAACTATCAAAAGTTGTTGACATAAAGTCTGAAGTTAGATCCACCACAGCTCAAATGAATGGGAGTTATGATTCACTGCAAGAAACCACATCACTCAGTAGAAGAAGTGTCACTTTGGCCGATGTCAGTGTCAACACTGGCAGGTCACTTTCCGCTGAAGATGACACTGACGGAGATATAGTAGAAAAAAGTTCTGATATCATTCAAAGTGAAGAAAAACCTATAGAGCAAATAGAGACTATACGAGTAGACACAAAAACAGATGACAAAGATGTGGTTCTGGAGAATGTAACTGTTGAGATTCAACATAATATTACTCCAAAGAAGTCCAGCTTAAAACTAGACCTCAAGAAAGGAACAAGCCAACTATCCACATCGTTACTAAACATATCAAGTCAAATCAAATCAGTGACAACTCATAAAAGGATAGTCAGTACTACTGGACCAAGAAAAGTAATTCCTTTAGAATCTACTTCAAAAGTTAAAGATGAACATAAGCCTAGCTCATCACAGCAGAGCACTCCAAAGTCTGCAAAAACTTCCCGTCCATTAGTAAATACTAAATCACCAAATGTATTGGTTTATTCTGATAGTTTAGTTGCTAGAGATAATTTAGAAGCGTCATTGAAAAAAGTTTTGGACTGCGATAGGTACACGGTGCAGAGCGTGTCCCGGGCGGCGCTGGAGGCGGGCGCGTGGCGGGGGCGCGCGGCGCTGGTGGCGGTGGCGGGGTGCGCGGGGCGGGGCGCGGCGCTGCTGCTGGCGCACCTGCTCGACGGCGGCAGACTGCTCGCGCTCTGCTCAGACCTGCTGCACTCAGTACTTCCCTACTACAAGACTGCCGAGGTACGAGAAAACGAAATAGTTCAGTTCACATACGACAAATGGAAGTCCGTCAAAATGAAACATCACATATTCTGTTACCAAGCCTCGCCTGCAAAGAAACAGTTCTCCACAGAAAGTGATAGACAAGCAAGTCAGGAAAATAATATGACTCGGCCTTCTAAATATACCGGCCACCCTGGGCACGAGTTGGACATACAAGTGTTAGCGTCGGAAGAGACTTGGCGCACACCGTCATTGCTACAGGCCACCGATTTGACTAATAGTGGAATTGCTATATTTTCACAGATTCATTTAGAAGCGGATCCAAGCGACTATTTGGGTGACGAAGCAGCCGAAAGTAACGTAGCTCGTTTGGGGATATTGCACAAGATATGCGGAGAGATTCTAGGTTTGCACGTAAGAGATCCGGCGGAATTCAAACAAGTCGAATACACCAGAGGATTTTTCCTCGGGAACCATGTTCACAAGTTGTCGCAAGTGGAGCGCTGGTGTCCGGCGGTGGACGGCGGCGCCCGCGTTCAGCAGTTGGGGGATCTCGAGGTGCAGTGGTGCTTGAGAGGGGAAGCGCCCAGGGAACCCCCCTCGGAAAATTTCTTGCCAGTCCACGTCTACGAATGTCCCGAAAACTTCTCCACCGTCGAGTACTTTGACAATCTGAGTAGCCGGTGCGTGGGTCGGCTGGTGGTGTACGCGGAGGTGATGTCGTCCACGATGCGCGTGACGTCACAGCCGCTCGCGCACGGCGCGGGGGCGGTGGCGGGGAGGCAGGCCGCCGCGCGGGGCAGGGGGGGGAACACCTGGCTGTCACCGCTCGGACAGGCCTCCATATCCGTGCAGATATGGCACAAGATGTCTCCGTCGACGCCGCTGGTACAGCACGCGGCCGCCCTCGCAGCGGTACAAGCCATACGATGCCAACCGAACTACGAAAACTTAGACATTAGGATAAAATGGCCTAATGACATCTACTACGGCCGGGATGTCAAAATAGGCGGCACCATCACCACAGCGAACTGCATGGGCGATGACGTCATCCTCAACATAGGGACCGGTGTGAACATATCAAACAAGGTGCCGACGACGTGCGTTAACGACATCATCGAGGAGTACAACGAGGCGCACGGCGCGGCCCTGGCCCCCATGTCCATAGAGAAGTTCCTAGCGCGCTACTGCACCCAGTTGGAGCGGACCTTGGACCAGCTGGCGGCCGATGCGGGCATCGAGGCCTTCTTGCGGCTGTACTACGAGTACTGGCTTCACACCGGGGAAGAGATCCGCGTGCATACCGACGACGGCTCAAGCCCTGTCGTGGGCACCGTCATTGGTGTGGACGAGGCGGGTTGGCTGCTGGTCAACACCGCGGCCGGCGAGACCAAGCTCGCCCCCGACGGGAACACGTTTGACATGATGAGCGGCCTGATAGCTCCTAGACTGTAA

Protein

MKPTQCIEISDWVTCSGGMPLGSSDQSPVTDLDVDILFECEMDPHEDSSPNVTTLESMGQPIAWKAGSHLAIVLKTNIEHLSVIGFQFVGGEFVIDHNLPVVRIQTVQICGDPNKAVDASMRSLRTDIQNNLKNPLEFQWSVHAALLRKLSKVVDIKSEVRSTTAQMNGSYDSLQETTSLSRRSVTLADVSVNTGRSLSAEDDTDGDIVEKSSDIIQSEEKPIEQIETIRVDTKTDDKDVVLENVTVEIQHNITPKKSSLKLDLKKGTSQLSTSLLNISSQIKSVTTHKRIVSTTGPRKVIPLESTSKVKDEHKPSSSQQSTPKSAKTSRPLVNTKSPNVLVYSDSLVARDNLEASLKKVLDCDRYTVQSVSRAALEAGAWRGRAALVAVAGCAGRGAALLLAHLLDGGRLLALCSDLLHSVLPYYKTAEVRENEIVQFTYDKWKSVKMKHHIFCYQASPAKKQFSTESDRQASQENNMTRPSKYTGHPGHELDIQVLASEETWRTPSLLQATDLTNSGIAIFSQIHLEADPSDYLGDEAAESNVARLGILHKICGEILGLHVRDPAEFKQVEYTRGFFLGNHVHKLSQVERWCPAVDGGARVQQLGDLEVQWCLRGEAPREPPSENFLPVHVYECPENFSTVEYFDNLSSRCVGRLVVYAEVMSSTMRVTSQPLAHGAGAVAGRQAAARGRGGNTWLSPLGQASISVQIWHKMSPSTPLVQHAAALAAVQAIRCQPNYENLDIRIKWPNDIYYGRDVKIGGTITTANCMGDDVILNIGTGVNISNKVPTTCVNDIIEEYNEAHGAALAPMSIEKFLARYCTQLERTLDQLAADAGIEAFLRLYYEYWLHTGEEIRVHTDDGSSPVVGTVIGVDEAGWLLVNTAAGETKLAPDGNTFDMMSGLIAPRL

Uniprot

H9JKT1 A0A2A4JH97 A0A2H1V356 A0A3S2NTT9 A0A194QJ87 A0A212EY96 + More
A0A194QZM3 A0A0L7LR57 A0A067RAP5 A0A034W455 A0A034W2I3 A0A034W021 A0A034W3L1 W8AXE8 W8ATG5

Pubmed

19121390 26354079 22118469 26227816 24845553 25348373 + More
24495485

EMBL

BABH01011592 NWSH01001580 PCG70803.1 ODYU01000453 SOQ35280.1 RSAL01000202 + More
RVE44405.1 KQ459167 KPJ03516.1 AGBW02011577 OWR46466.1 KQ460930 KPJ10734.1 JTDY01000281 KOB77925.1 KK852818 KDR15700.1 GAKP01010047 JAC48905.1 GAKP01010048 JAC48904.1 GAKP01010046 JAC48906.1 GAKP01010045 JAC48907.1 GAMC01017082 JAB89473.1 GAMC01017083 JAB89472.1

Proteomes

UP000005204 UP000218220 UP000283053 UP000053268 UP000007151 UP000053240 + More
UP000037510 UP000027135

PRIDE

H9JKT1

Pfam

PF02237   BPL_C        + More
PF03099   BPL_LplA_LipB
PF09825   BPL_N

Interpro

IPR003142   BPL_C        + More
IPR004143   BPL_LPL_catalytic
IPR004408   Biotin_CoA_COase_ligase
IPR019197   Biotin-prot_ligase_N

ProteinModelPortal

H9JKT1 A0A2A4JH97 A0A2H1V356 A0A3S2NTT9 A0A194QJ87 A0A212EY96 + More
A0A194QZM3 A0A0L7LR57 A0A067RAP5 A0A034W455 A0A034W2I3 A0A034W021 A0A034W3L1 W8AXE8 W8ATG5

PDB

2E10 E-value=0.00598086, Score=97

KEGG

101743517 K01942 biotin---protein ligase [EC:6.3.4.9 6.3.4.10 6.3.4.11 6.3.4.15] | (RefSeq) biotin--protein li

PATHWAY

00780 Biotin metabolism - Bombyx mori (domestic silkworm)
01100 Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0004077 GO:0006464 GO:0016020 GO:0004872 GO:0005216 GO:0006811 GO:0006032 GO:0016021 GO:0004672 GO:0048384

Length:

908

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.06993

Exp number, first 60 AAs:

0.00021

Total prob of N-in:

0.00319

outside

1 - 908

Pi

219.522287

Theta

180.004789

Tajima's D

0.694505

CLR

0.037097

CSRT

0.571621418929053

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics