SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03977
Pre Gene Modal
BGIBMGA010134
Annotation
PREDICTED:_uncharacterized_protein_LOC105842354_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 1.51 PlasmaMembrane   Reliability : 1.037
 

Sequence

CDS
ATGCATCTCAATTTGGTAACGCTTACTTTTATTGTGGCGCTAGTCGTGGCCACAAAACCCAATAAAAGAAGCTTAGTCAATCCAGAATTGTATGGATGGTCAGGCTCCGCCGGTTGGCTGCAAATTCCTCATGGTTGGTCGTCGGATACAAATTCTGATGTGGCTGGGGCTATAGCCGCAGCCAAATCTGCAGCTGCGGCGGTGATGTCAGCGCAACACGAGGTTGCCGCCGCTAAGCATGCTGCTCTTCAACACCAGAGTCTCGCCAGCGCAAAAGAAGCAACTGCAGCTCACGCCGCTCACAAGAGCGAGGAAGCAGCTAGAAACGCTCGTGCTCATGCATTGGAAGCAGCACAAGCCGCGGTTCACTCACAAGCACAGCTCGCTGCGGCAAAGGCAAGAGCTGCTGTCGCGCATAAGATTGCCGCAGCCAGGGAAGCCGCTGCTGCTAAAGCTATAGAAAGAGCTGCTAGTAATCAGGCTGCTAGATTACAGAACGCAGATATAGAAAACTTAAAGCTGTCAGTTATACAAAGTTCCGGGGCAGCTGGTGCGGCTACTGCAGCACAGCACACAGCCACTGCTGCTGCAGCAGCGCTGCGTACACCTGCTTCCGATTGGCCTGTGAAACTCTGGTCTCCTTCTAGCGGACCCTGGGCCTGGGCTTAA
Protein
MHLNLVTLTFIVALVVATKPNKRSLVNPELYGWSGSAGWLQIPHGWSSDTNSDVAGAIAAAKSAAAAVMSAQHEVAAAKHAALQHQSLASAKEATAAHAAHKSEEAARNARAHALEAAQAAVHSQAQLAAAKARAAVAHKIAAAREAAAAKAIERAASNQAARLQNADIENLKLSVIQSSGAAGAATAAQHTATAAAAALRTPASDWPVKLWSPSSGPWAWA

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 17,         Likelihood:  0.909478
 
 
Length:
222
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.14624
Exp number, first 60 AAs:
0.14003
Total prob of N-in:
0.02562
outside
1  -  222
 
 

Population Genetic Test Statistics

Pi
359.728243
Theta
193.113587
Tajima's D
2.573184
CLR
0.028025
CSRT
0.951602419879006
Interpretation
Uncertain
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