SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03963
Pre Gene Modal
BGIBMGA011806
Annotation
PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101738815_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.528
 

Sequence

CDS
ATGGCACATCACGTACACCCTAATGGGATGTATTCTCAACACCATCCGCAACTATCAGCCCACCTCACGTCTACACAAACAGATCAAATACCACCGAATGGCGTCATGCATCAGTTATTACAAAGTTACAACGTGGAAGTTTATCAAGATTATTTAAAACGCAACCCACCGAAAGATTCAAACCAAATTTACCAAAACCATCAGCCTACGTATAGACCAAATGCAAACCAATACAGCTCTAAACCATATTTACCATACTCTAATAGAATAGGGCCCCAAAGCAATACAGAGTTGTTACGAAAACAGTACAACGAAATTCAGCAGATGAAATTGCAGCAACAAATTCATTATCAAAACCAGGCTCAGATGCACCAACAACAAAAGTTCGCTGAGCGACAACTTCTTTTACAGCAAATTCATGGGGTTCAGCCACCTCCCAATTTACAAAATAGTATATATTCAGATAGTTCTTACCGTGATTTAGATAGATATAGTTCTAAAAATGATTATAAGGATTATAGCAGTCCAGAAACACCAAAAGACATAGAAAAGTATGAGAAGAACAATGACTATCGCGAGGTGGAAAATCGTAACCGTCAGTACCAAGAGCCTCAGTGGCAACACAATCAACAAACAGAATACAGAGAACAACATGAAGTTCACAAAAGGCTAGCAGAAGGAGACAAAGGAATCAATAAACCCTCAAATTCAGCTGGTCAAAATCAAAAAAATAACGTAGTTTCCCCTATGAAGTCAACAAGCGAGTCCAGTTCTCCAAGTGTGAAGTCACCGTCTTCAGAGAGCCGGAGAAGTAGCAGCGGAACCCAAGCACTGAGATCACCAACGGCTCAACGAATACCATCTGCCCCGGTAACAGTAGCCGGTATTTTGTATAAACAAGGATCGGATGGCCTAAAAGTATGGCGCAAGAGATGGTTTGTGTTATCCGAATACTGCTTATTTTACTATAAAAGTCAAGAAGAGGAAAAGTTGCTGGGGTCCGTTTTGTTACCTTCATACAAAGTGTCCGTTTGTACCGCAGAAGACAAAGTACTCCGAAAGTTTGCGTTCAAATTAGAGCATGCAAATATGAGAACATATGTACTGGCAGCACCCGACCAAGAAGCCATGATGAAGTGGATGAAGGCTTTGACGATGGCCGCGGTCATGCAAACTCCCAACGATCCACCACACAGTCGAAACGATTTGTCCACTACCAAAGCAGAGGACGGCGAAGATATACCGATGTATGCGAATGCACCACCAAAACCTAGACGCTCCAATGAGGGATTTAATTCGCCAAGCCCGGACATGTACGATCCAAATTATGACCTACTCAAAAAACCGGCCTCGCATTACAGCCAAAGCATCAATCACATACGAAACCAAGAACACAACTACTCGAGCACAACTCAAGACCAGATTTATACACAAAGTCCACAGTCACCGTCGCAACAACAACGCACACATCACCAGAAAAGACCATACGATTCGCACAATCTCTCGTTGCCATTAACGAACATCGCAATGGATCGATTAGAGAACGAGCCGAGCACGTCAACGAATGATTTTAATTCCCGGTCTTTTGATAGGAGTCGAGGACTGCAGGACCAATCTCAGGAGCAGCGCAATAAAAACGAACAAATTTACGAGCGACAACCGCAAAAGAATCCGTTCTTGCACGGGCCAACCCCGAAAACGGGTAGCTCGTATAATATCGATATGAATGCGCAGAATCAAAATTATCAGACGAGAGGAAGTGATATACCACAATCGGTTAATAGAGATGATCATTCAGGAGCGAATTTGACGCCGAATCCGGTTGAGTCCGCCAGGGATTTGTATGGAGAATTAGATTCTCGGGTGAGTAGATCTAATAGCGCAGCCAACGAGCGGCTATTGATGGAGAGGCGAACTCCTGACGCGTACGGTAGATCTACGACCATGTCGTCCTACAATAAAGAGAAGACGGGAGATTACGAAGATATATACGGCATTTACGGAGTGGAAAACGATTATGGTAAAATGACCACTAAATCGTCAAGCATTAATGAAACTAAAGATAATGCCAGCAGTCACCAACATCAGTTGCAACACAATGTTCAAGAGAAAACATTTAGTGGCCCGTCAGTTCTGAGGAAGAAGAAAATGCAGTCGAGCGGTATTCAACCACCGATGCCTAGACCACATAGCGCTGATTTTCTCGAATACGAAGCGAAGAATGAAATGAAAAATAAATCTATGCCAACGAGGACAGTCCACGATCAAACTCGGCAGCCGCAAAGGCCAAAATCTAGTCTCGACATCAATTCCTACTACGACCCCAGCTCTGAGACATATTATTCGGAGGAGAGCTACGCCGAAAAAATGCGGCAGTCGGTCCAATATTTACAACAAGGAATGAGGGCTCGTAACATGGAGATACCTTTGGCGAAGTACGCAAGCGGCCTCGCCCAAAAGCAGTTGAGTACCGCCTATTCTCAAATCACAAATCATAACTACAACCCTGATTTGAATACGGCGAATAGGCTTAGTCGTGATCAGGTCAGTCATAGCTCGAAGTCGGACGTGGAAGCTATGAACTCGAATTGGACATTGAAAGAAAAGAATGCCGAAAATCAAAAAGACTACATGAACAGAAGTGGAAGTGTAATGAGCGATGGATCTAATGCGAGTGCAATGGTCAAGGATGCTAGTAGATACGATCCAAATGGCGAAAGTTTTTTGAGGTCTGCAAGTGCTAGGCTACCGTCAGCAACGGAAAAGGAAGGCGATAAGAAAGTGCAACAGGTATAG
Protein
MAHHVHPNGMYSQHHPQLSAHLTSTQTDQIPPNGVMHQLLQSYNVEVYQDYLKRNPPKDSNQIYQNHQPTYRPNANQYSSKPYLPYSNRIGPQSNTELLRKQYNEIQQMKLQQQIHYQNQAQMHQQQKFAERQLLLQQIHGVQPPPNLQNSIYSDSSYRDLDRYSSKNDYKDYSSPETPKDIEKYEKNNDYREVENRNRQYQEPQWQHNQQTEYREQHEVHKRLAEGDKGINKPSNSAGQNQKNNVVSPMKSTSESSSPSVKSPSSESRRSSSGTQALRSPTAQRIPSAPVTVAGILYKQGSDGLKVWRKRWFVLSEYCLFYYKSQEEEKLLGSVLLPSYKVSVCTAEDKVLRKFAFKLEHANMRTYVLAAPDQEAMMKWMKALTMAAVMQTPNDPPHSRNDLSTTKAEDGEDIPMYANAPPKPRRSNEGFNSPSPDMYDPNYDLLKKPASHYSQSINHIRNQEHNYSSTTQDQIYTQSPQSPSQQQRTHHQKRPYDSHNLSLPLTNIAMDRLENEPSTSTNDFNSRSFDRSRGLQDQSQEQRNKNEQIYERQPQKNPFLHGPTPKTGSSYNIDMNAQNQNYQTRGSDIPQSVNRDDHSGANLTPNPVESARDLYGELDSRVSRSNSAANERLLMERRTPDAYGRSTTMSSYNKEKTGDYEDIYGIYGVENDYGKMTTKSSSINETKDNASSHQHQLQHNVQEKTFSGPSVLRKKKMQSSGIQPPMPRPHSADFLEYEAKNEMKNKSMPTRTVHDQTRQPQRPKSSLDINSYYDPSSETYYSEESYAEKMRQSVQYLQQGMRARNMEIPLAKYASGLAQKQLSTAYSQITNHNYNPDLNTANRLSRDQVSHSSKSDVEAMNSNWTLKEKNAENQKDYMNRSGSVMSDGSNASAMVKDASRYDPNGESFLRSASARLPSATEKEGDKKVQQV

Summary

Pfam
PF00169   PH
Interpro
IPR011993   PH-like_dom_sf        + More
IPR001849   PH_domain       
IPR040392   PKHA4/5/6/7_PH       
Gene 3D
PDB
2DKP     E-value=1.17073e-29,     Score=327

Ontologies

GO

Topology

Length:
931
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00001
outside
1  -  931
 
 

Population Genetic Test Statistics

Pi
229.143843
Theta
183.165419
Tajima's D
0.888695
CLR
0.291531
CSRT
0.623668816559172
Interpretation
Uncertain
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