Gene

KWMTBOMO03957

Pre Gene Modal

BGIBMGA010237

Annotation

PREDICTED:_pseudouridine-5'-phosphatase-like_[Amyelois_transitella]

Location

Bomo_Chr7(+):6956764-6960121      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.923

CDS

ATGACGACTTTTAAGCCGGTAACGCACGTTCTCTTTGATATGGATGGGTTAATTTTAAATACGGAAGAATTATACACGGTTGCTTACCAAAATGTATTGAATGATTACGGTAAAACATATACATTTGAATTGAAAACAAAGTTAATGGGATTCCAGTCCCACGAGAGTGCAAAGACTATAATTTCGGAACTAAATTTGCCATTAACTCCAGAAGAATTCAATGAGGCAACTAAGAAACAGTTTGAATTAATCTTTCCTGACACTCAAGTTATGCCGGGTGCTAAAAGATTAATTGAACATTTGCATAAACATAATGTGCCTATTGCATTAGCTACTAGTTCAAGCATTGAAAGTTATGAACTGAAAGTCAATAAACATCACCAGGAATTATTTTCATTATTCCAATATAAGACATTTGGTTCTTCTGATGCTGAAGTGCAAAGAGGGAAACCGTATCCAGACATATTTCTCGTTAGTGCAAAAAGATTTCCAGACAAGCCTCAACCTCATCAGTGCCTCGTGTTTGAAGATGCCGTGAATGGAGTGAAAGCAGCTAGAGCAGCTGGAATGCAGGTTGTTATGGTGCCTGACCCAAGGACTGACAAATGTTTAACAGCTGAAGCTACATTGGTATTGAATAGTTTAGAAGAATTCAAACCTGAACTATTTGGGTTGCCACCTTTTGACAACTAG

Protein

MTTFKPVTHVLFDMDGLILNTEELYTVAYQNVLNDYGKTYTFELKTKLMGFQSHESAKTIISELNLPLTPEEFNEATKKQFELIFPDTQVMPGAKRLIEHLHKHNVPIALATSSSIESYELKVNKHHQELFSLFQYKTFGSSDAEVQRGKPYPDIFLVSAKRFPDKPQPHQCLVFEDAVNGVKAARAAGMQVVMVPDPRTDKCLTAEATLVLNSLEEFKPELFGLPPFDN

Uniprot

H9JL36   A0A2W1BX41   S4PLG4   A0A2H1WMW9   A0A194QZP8   A0A194Q1D5   + More
A0A212FKC6   A0A2W1BQK6   A0A2A4JAX9   H9JL37   A0A162CH04   A0A0P5K3D5   A0A0P5H6Y2   A0T4G2   A0A194QYZ7   E9GI09   A0A0P6EIH3   A0A194Q1A8   A0A0L7KR64   A0A2M3Z4S4   A0A2M4ALP7   A0A2M4BY45   W5JCB8   A0A336MLB5   E9IZ63   W8BI78   A0A194Q209   A0A195CY64   A0A151IEQ1   A0A0P5CL00   A0A0P5UV50   A0A2H1WL50   A0A195DNI0   A0A0P4VWN2   A0A151XCE6   A0A1L8ECQ6   E2ATA8   A0A195FI83   A0A3R7NW74   A0A1E1XRC3   A0A131YQD2   E2BE28   F4W6C9   A0A0P6GW95   A0A151X0K1   A0A0M4EEI1   A0A0Q9X5P5   T1J953   A0A3B4ED79   A0A026WIG7   E9IV40   A0A3B1IUN1   A0A195AVH3   A0A158P248   A0A1I8Q822   A0A1I8MNA0   Q17GH7   A0A023GGR8   B4LT64   A0A2W1BQT3   A0A0J7L6L0   A0A0P5R2D3   F1RE99   A0A087UZ70   A0A3B0JHT9   A0A2A3E2K7   A0A0A1WZY1   A0A0N8AFJ2   A0A1W4WK88   A0A0N0BIR5   A0A2A4J9F2   A0A0R3NZ21   A0A195E6Q3   E2B275   G3W9C4   A0A2P2I4A9   A0A158NLD8   A0A1L8DCT0   A0A139WHD2   A0A0Q9X0K5   A0A131Y8V4   A0A131XR85   A0A212EJH8   A0A0P5TUB6   A0A0K8U9E4   A0A3Q1IGB7   A0A0U1TYF2   A0A0P4YW63   A0A0P6FKL9   A0A034WN03   A0A0C9RAW5   V5HGH4   H2PUV1   A0A067QTN3   A0A0P5IQ77   A0A1E1XFP7   E3TE93   A0A131Z0D8   A0A2I2UHS4   W6FIL1  

Pubmed

19121390    28756777    23622113    26354079    22118469    12364791    + More
14747013    17210077    21292972    26227816    20920257    23761445    21282665    24495485    20798317    29209593    26830274    21719571    17994087    24508170    30249741    25329095    21347285    25315136    17510324    18057021    23594743    25830018    15632085    23185243    21709235    18362917    19820115    28049606    25348373    25765539    24845553    28503490    20634964    17975172    24630959   

EMBL

BABH01011545    KZ149930    PZC77380.1    GAIX01004040    JAA88520.1    ODYU01009402    + More
SOQ53804.1    KQ460930    KPJ10759.1    KQ459579    KPI99366.1    AGBW02008070    OWR54191.1    PZC77379.1    NWSH01002306    PCG68580.1    LRGB01000868    KZS15742.1    GDIQ01215870    JAK35855.1    GDIQ01238018    JAK13707.1    AAAB01008904    EAA44497.5    KPJ10758.1    GL732545    EFX80956.1    GDIQ01076017    JAN18720.1    KPI99367.1    JTDY01007038    KOB65504.1    GGFM01002768    MBW23519.1    GGFK01008394    MBW41715.1    GGFJ01008792    MBW57933.1    ADMH02001839    ETN60968.1    UFQT01001478    SSX30730.1    GL767119    EFZ14132.1    GAMC01009877    JAB96678.1    KPI99368.1    KQ977115    KYN05610.1    KQ977858    KYM99286.1    GDIP01170096    GDIP01047523    JAJ53306.1    GDIP01107907    JAL95807.1    SOQ53803.1    KQ980724    KYN14054.1    GDRN01108173    GDRN01108172    JAI57305.1    KQ982314    KYQ58023.1    GFDG01002312    JAV16487.1    GL442545    EFN63353.1    KQ981523    KYN40385.1    QCYY01002667    ROT68424.1    GFAA01001621    JAU01814.1    GEDV01007867    JAP80690.1    GL447755    EFN86015.1    GL887707    EGI70264.1    GDIQ01028265    JAN66472.1    KQ982625    KYQ53466.1    CP012523    ALC38555.1    CH933807    KRG03519.1    JH431970    KK107185    QOIP01000012    EZA55810.1    RLU16311.1    GL766116    EFZ15560.1    KQ976731    KYM76233.1    ADTU01006978    CH477259    EAT45748.1    GBBM01002339    JAC33079.1    CH940649    EDW64906.2    KRF81935.1    PZC77378.1    LBMM01000494    KMQ98213.1    GDIQ01106461    JAL45265.1    CR925879    KK122409    KFM82659.1    OUUW01000004    SPP79872.1    KZ288425    PBC25930.1    GBXI01009668    JAD04624.1    GDIP01152401    JAJ71001.1    KQ435726    KOX78131.1    PCG68581.1    CH379060    KRT04420.1    KRT04421.1    KQ979568    KYN20771.1    GL445067    EFN60201.1    AEFK01126806    AEFK01126807    AEFK01126808    AEFK01126809    AEFK01126810    AEFK01126811    AEFK01126812    AEFK01126813    AEFK01126814    AEFK01126815    IACF01003097    LAB68726.1    ADTU01019320    GFDF01009815    JAV04269.1    KQ971343    KYB27261.1    CH963852    KRF98274.1    GEFM01000881    JAP74915.1    GEFH01000395    JAP68186.1    AGBW02014474    OWR41621.1    GDIP01126757    JAL76957.1    GDHF01029334    JAI22980.1    EU252355    ACD11926.1    GDIP01222754    JAJ00648.1    GDIQ01046537    JAN48200.1    GAKP01001996    JAC56956.1    GBYB01003996    JAG73763.1    GANP01001728    JAB82740.1    ABGA01388421    ABGA01388422    ABGA01388423    NDHI03003531    PNJ26873.1    KK853286    KDR08959.1    GDIQ01211918    JAK39807.1    GFAC01001277    JAT97911.1    GU588673    ADO28629.1    GEDV01004362    JAP84195.1    AANG04001271    KF896502    AHJ25803.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000007151    UP000218220    UP000076858    + More
UP000007062    UP000000305    UP000037510    UP000000673    UP000078542    UP000078492    UP000075809    UP000000311    UP000078541    UP000283509    UP000008237    UP000007755    UP000092553    UP000009192    UP000261440    UP000053097    UP000279307    UP000018467    UP000078540    UP000005205    UP000095300    UP000095301    UP000008820    UP000008792    UP000036403    UP000000437    UP000054359    UP000268350    UP000242457    UP000192223    UP000053105    UP000001819    UP000007648    UP000007266    UP000007798    UP000265040    UP000001595    UP000027135    UP000221080    UP000011712   

PRIDE

H9JL36    H9JL37   

Pfam

PF13419   HAD_2

Interpro

IPR023198   PGP-like_dom2        + More
IPR006439   HAD-SF_hydro_IA       
IPR023214   HAD_sf       
IPR041492   HAD_2       
IPR036412   HAD-like_sf       
IPR036875   Znf_CCHC_sf       

SUPFAM

SSF56784   SSF56784        + More
SSF57756   SSF57756       

Gene 3D

1.10.150.240     3.40.50.1000    

ProteinModelPortal

H9JL36   A0A2W1BX41   S4PLG4   A0A2H1WMW9   A0A194QZP8   A0A194Q1D5   + More
A0A212FKC6   A0A2W1BQK6   A0A2A4JAX9   H9JL37   A0A162CH04   A0A0P5K3D5   A0A0P5H6Y2   A0T4G2   A0A194QYZ7   E9GI09   A0A0P6EIH3   A0A194Q1A8   A0A0L7KR64   A0A2M3Z4S4   A0A2M4ALP7   A0A2M4BY45   W5JCB8   A0A336MLB5   E9IZ63   W8BI78   A0A194Q209   A0A195CY64   A0A151IEQ1   A0A0P5CL00   A0A0P5UV50   A0A2H1WL50   A0A195DNI0   A0A0P4VWN2   A0A151XCE6   A0A1L8ECQ6   E2ATA8   A0A195FI83   A0A3R7NW74   A0A1E1XRC3   A0A131YQD2   E2BE28   F4W6C9   A0A0P6GW95   A0A151X0K1   A0A0M4EEI1   A0A0Q9X5P5   T1J953   A0A3B4ED79   A0A026WIG7   E9IV40   A0A3B1IUN1   A0A195AVH3   A0A158P248   A0A1I8Q822   A0A1I8MNA0   Q17GH7   A0A023GGR8   B4LT64   A0A2W1BQT3   A0A0J7L6L0   A0A0P5R2D3   F1RE99   A0A087UZ70   A0A3B0JHT9   A0A2A3E2K7   A0A0A1WZY1   A0A0N8AFJ2   A0A1W4WK88   A0A0N0BIR5   A0A2A4J9F2   A0A0R3NZ21   A0A195E6Q3   E2B275   G3W9C4   A0A2P2I4A9   A0A158NLD8   A0A1L8DCT0   A0A139WHD2   A0A0Q9X0K5   A0A131Y8V4   A0A131XR85   A0A212EJH8   A0A0P5TUB6   A0A0K8U9E4   A0A3Q1IGB7   A0A0U1TYF2   A0A0P4YW63   A0A0P6FKL9   A0A034WN03   A0A0C9RAW5   V5HGH4   H2PUV1   A0A067QTN3   A0A0P5IQ77   A0A1E1XFP7   E3TE93   A0A131Z0D8   A0A2I2UHS4   W6FIL1  

PDB

3L5K     E-value=4.46962e-62,     Score=600

KEGG

101744719    K17623 pseudouridine 5'-phosphatase [EC:3.1.3.96] | (RefSeq) pseudouridine-5'-phosphatase

GO

GO:0016787   GO:0016021   GO:0000287   GO:0003676   GO:0008270   GO:1990738   GO:0008152   GO:0006351   GO:0005634   GO:0005665   GO:0043565   GO:0004672   GO:0048384  

Length:

230

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00678

Exp number, first 60 AAs:

0.00678

Total prob of N-in:

0.08039

outside

1  -  230

 

 

Pi

244.981726

Theta

199.723088

Tajima's D

0.773415

CLR

0.009241

CSRT

0.595820208989551

Interpretation

Uncertain