Gene

KWMTBOMO03954

Pre Gene Modal

BGIBMGA010236

Annotation

PREDICTED:_FAM206_family_protein_CG9288_[Amyelois_transitella]

Location

Bomo_Chr7(+):6933504-6934620      View in EpiBrowser

Full name

Protein Abitram      

Alternative Name

Actin-binding transcription modulator
Protein Simiate

Location in the cell

Nuclear   Reliability : 2.199

CDS

ATGGATTTCAACATTCTAGATTCAATACCAGACTTAGACAATCTGAAGACCTTCACAGAGAGATACTTTTCAAAACGATACTTAATTAATGTAGATGGCATAAAAAATAATGATATGATGATAATGTTTCATTCAAACCGAATTGCATTGTTATCTCTAGCACCAAGTCATTCCTTCTTCAGTAAAGACGAAAATTACAAAATTAACTTCAACATTGGTAAAATTGATCGTTTGAACAATTCTGTCAAAGGAAAAAGTAAAAAGGGCGGACAACTATTATCTCCAAAATCTGTGATTTGCAAGATAGAATTCAGCGATGAAAGCGTATTTGAAGTGCCCTGTTGCATGAAAGGTACTTTGGTTGAAGTTAATGAAGAACTTGTACAGAATCCATTGTTGCTGAAAAACATGCCAGATTCTGATGGATTTATTGCCATTATGCTAGCAAGTATAGCAATTTCAGAAGCGACAAAAAGTGAGTTGTTAACTCATGAAGAGTACATAAAATGTATTGATTGTTCTGTTAATAAACAATAG

Protein

MDFNILDSIPDLDNLKTFTERYFSKRYLINVDGIKNNDMMIMFHSNRIALLSLAPSHSFFSKDENYKINFNIGKIDRLNNSVKGKSKKGGQLLSPKSVICKIEFSDESVFEVPCCMKGTLVEVNEELVQNPLLLKNMPDSDGFIAIMLASIAISEATKSELLTHEEYIKCIDCSVNKQ

Description

May regulate actin polymerization.
May regulate actin polymerization, filopodia dynamics and arborization of neurons.

Similarity

Belongs to the ABITRAM family.

Keywords

Complete proteome   Reference proteome   Cell projection   Nucleus  

Feature

chain  Protein Abitram

Uniprot

H9JL35   A0A2A4J9Z8   I4DKC8   S4NT05   A0A2W1BZY7   A0A194R4H5   + More
A0A212EJI4   A0A0L7LMJ4   A0A1E1WDS2   A0A067QQ89   E2AFK5   A0A0J7KQG0   A0A2J7PY37   E9I8S5   A0A1B6I720   A0A0M9A5Q6   E9H8P1   E2B2R3   A0A2A3EM76   A0A026WSS4   A0A1B6G029   T1JEP8   A0A2T7PBM9   A0A1E1X3V7   A0A2R7WHB2   F4WNK9   A0A0P5YLV3   A0A0P5V7J1   A0A0N7ZX54   R7VL45   K7ITV4   A0A023GAU0   A0A2R5LNF8   A0A293LNN7   A0A232F0W9   A0A0N8EIL6   A0A195ED45   A0A0L7R667   B4NHA8   G3MRZ1   A0A195FW66   A0A0L8FGF0   A0A1S3I8Q1   A0A158NUJ0   A0A0C9RTE5   A0A1E1XVH9   A0A131XGU2   Q1DGE2   A0A1S3HHR9   A0A195B8C7   A7SRF3   A0A131YRZ4   A0A3S3P490   A0A1U7RWL0   Q17GK9   L7M4R5   A0A151IMA2   A0A151NCS3   A0A183J8K0   A0A1S2ZA59   A0A151WGU2   B0X169   B4R0L1   A0A224YZN5   B4HF91   A0A3M6UFE2   A0A1B6C9I2   B3LVS2   A0A023EIT8   A0A0C9RJQ5   B3P400   A0A098M1G1   H3AZ21   Q9VFR1   H2Y7P9   A0A369RSN2   A0A0B8RZG8   B3SC65   A0A3B1J1X9   B4PQJ3   A0A182G5W2   A0A1W4USJ6   A0A3B5KB98   V9LDI1   A0A1X7VV63   A0A2D0PZ28   A0A3Q2NMD2   A0A091DVC0   A0A3Q3K6D9   A0A3Q2NMF3   A0A3Q1G4H4   E0W2B6   A0A3Q2ZIF7   A0A3Q1AN17   A0A3P8TB30   G3H9F6   A0A146ZNE4   Q1LU93   A0A3P8T8J6   V9LCC4  

Pubmed

19121390    22651552    26354079    23622113    28756777    22118469    + More
26227816    24845553    20798317    21282665    21292972    24508170    30249741    28503490    21719571    23254933    20075255    28648823    17994087    22216098    21347285    26131772    29209593    28049606    17510324    17615350    26830274    25576852    22293439    28797301    30382153    24945155    9215903    10731132    12537572    12537569    30042472    25476704    18719581    25329095    17550304    26483478    21551351    24402279    20566863    21804562    23594743   

EMBL

BABH01011545    NWSH01002306    PCG68576.1    AK401746    KQ459600    BAM18368.1    + More
KPI94193.1    GAIX01013837    JAA78723.1    KZ149930    PZC77383.1    KQ460930    KPJ10761.1    AGBW02014474    OWR41618.1    JTDY01000583    KOB76579.1    GDQN01005921    JAT85133.1    KK853141    KDR10756.1    GL439118    EFN67756.1    LBMM01004315    KMQ92573.1    NEVH01020850    PNF21251.1    GL761649    EFZ23020.1    GECU01024987    GECU01009873    JAS82719.1    JAS97833.1    KQ435728    KOX77777.1    GL732605    EFX71850.1    GL445232    EFN90003.1    KZ288219    PBC32269.1    KK107109    QOIP01000008    EZA59082.1    RLU19484.1    GECZ01013993    JAS55776.1    JH432127    PZQS01000005    PVD30819.1    GFAC01005264    JAT93924.1    KK854825    PTY19043.1    GL888237    EGI64202.1    GDIP01055977    LRGB01000084    JAM47738.1    KZS21019.1    GDIP01119213    JAL84501.1    GDIP01203905    JAJ19497.1    AMQN01004070    KB292570    ELU17295.1    GBBM01005613    JAC29805.1    GGLE01006832    MBY10958.1    GFWV01010388    MAA35117.1    NNAY01001370    OXU24209.1    GDIQ01023140    JAN71597.1    KQ979074    KYN22742.1    KQ414648    KOC66329.1    CH964272    EDW84584.1    JO844642    AEO36259.1    KQ981215    KYN44562.1    KQ432350    KOF62783.1    ADTU01002850    GBZX01002119    JAG90621.1    GFAA01000345    JAU03090.1    GEFH01002979    JAP65602.1    CH902418    EAT32221.1    KQ976565    KYM80497.1    DS469761    EDO33701.1    GEDV01006533    JAP82024.1    NCKU01000696    RWS14533.1    CH477258    EAT45790.1    EAT45791.1    GACK01006172    JAA58862.1    KQ977063    KYN05994.1    AKHW03003364    KYO34614.1    UZAM01017183    VDP46300.1    KQ983150    KYQ47037.1    DS232254    EDS38517.1    CM000364    EDX13026.1    GFPF01008074    MAA19220.1    CH480815    EDW42265.1    RCHS01001653    RMX52362.1    GEDC01027187    JAS10111.1    CH902617    EDV43696.1    GAPW01004727    JAC08871.1    GBYB01008430    JAG78197.1    CH954181    EDV49174.1    GBSI01000409    JAC96086.1    AFYH01095442    AFYH01095443    AE014297    AY069582    NOWV01000223    RDD37697.1    GBSH01000506    JAG68518.1    DS985268    EDV19667.1    CM000160    EDW97289.1    JXUM01146730    KQ570231    KXJ68411.1    JW878329    AFP10846.1    KN123095    KFO26721.1    DS235875    EEB19772.1    JH000228    EGV92491.1    GCES01018460    JAR67863.1    BX957315    BX927389    BC125852    JW877803    AFP10320.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000037510    + More
UP000027135    UP000000311    UP000036403    UP000235965    UP000053105    UP000000305    UP000008237    UP000242457    UP000053097    UP000279307    UP000245119    UP000007755    UP000076858    UP000014760    UP000002358    UP000215335    UP000078492    UP000053825    UP000007798    UP000078541    UP000053454    UP000085678    UP000005205    UP000008820    UP000078540    UP000001593    UP000285301    UP000189705    UP000078542    UP000050525    UP000050793    UP000079721    UP000075809    UP000002320    UP000000304    UP000001292    UP000275408    UP000007801    UP000008711    UP000008672    UP000000803    UP000007875    UP000253843    UP000009022    UP000018467    UP000002282    UP000069940    UP000249989    UP000192221    UP000005226    UP000007879    UP000221080    UP000265000    UP000028990    UP000261600    UP000257200    UP000009046    UP000264800    UP000257160    UP000265080    UP000001075    UP000000437   

PRIDE

H9JL35    L7M4R5    Q9VFR1    Q1LU93   

Pfam

PF01571   GCV_T        + More
PF08669   GCV_T_C
PF01597   GCV_H
PF08583   Cmc1

Interpro

IPR029043   GcvT/YgfZ_C        + More
IPR006222   GCV_T_N       
IPR027266   TrmE/GcvT_dom1       
IPR006223   GCS_T       
IPR013977   GCV_T_C       
IPR011053   Single_hybrid_motif       
IPR039169   Abitram       
IPR033753   GCV_H/Fam206       
IPR013892   Cyt_c_biogenesis_Cmc1-like       

SUPFAM

SSF51230   SSF51230        + More
SSF101790   SSF101790       

Gene 3D

3.30.1360.120    

ProteinModelPortal

H9JL35   A0A2A4J9Z8   I4DKC8   S4NT05   A0A2W1BZY7   A0A194R4H5   + More
A0A212EJI4   A0A0L7LMJ4   A0A1E1WDS2   A0A067QQ89   E2AFK5   A0A0J7KQG0   A0A2J7PY37   E9I8S5   A0A1B6I720   A0A0M9A5Q6   E9H8P1   E2B2R3   A0A2A3EM76   A0A026WSS4   A0A1B6G029   T1JEP8   A0A2T7PBM9   A0A1E1X3V7   A0A2R7WHB2   F4WNK9   A0A0P5YLV3   A0A0P5V7J1   A0A0N7ZX54   R7VL45   K7ITV4   A0A023GAU0   A0A2R5LNF8   A0A293LNN7   A0A232F0W9   A0A0N8EIL6   A0A195ED45   A0A0L7R667   B4NHA8   G3MRZ1   A0A195FW66   A0A0L8FGF0   A0A1S3I8Q1   A0A158NUJ0   A0A0C9RTE5   A0A1E1XVH9   A0A131XGU2   Q1DGE2   A0A1S3HHR9   A0A195B8C7   A7SRF3   A0A131YRZ4   A0A3S3P490   A0A1U7RWL0   Q17GK9   L7M4R5   A0A151IMA2   A0A151NCS3   A0A183J8K0   A0A1S2ZA59   A0A151WGU2   B0X169   B4R0L1   A0A224YZN5   B4HF91   A0A3M6UFE2   A0A1B6C9I2   B3LVS2   A0A023EIT8   A0A0C9RJQ5   B3P400   A0A098M1G1   H3AZ21   Q9VFR1   H2Y7P9   A0A369RSN2   A0A0B8RZG8   B3SC65   A0A3B1J1X9   B4PQJ3   A0A182G5W2   A0A1W4USJ6   A0A3B5KB98   V9LDI1   A0A1X7VV63   A0A2D0PZ28   A0A3Q2NMD2   A0A091DVC0   A0A3Q3K6D9   A0A3Q2NMF3   A0A3Q1G4H4   E0W2B6   A0A3Q2ZIF7   A0A3Q1AN17   A0A3P8TB30   G3H9F6   A0A146ZNE4   Q1LU93   A0A3P8T8J6   V9LCC4  

KEGG

101744190    no KO assigned | (RefSeq) FAM206 family protein CG9288

GO

GO:0004047   GO:0006546   GO:0030425   GO:0030426   GO:0016607   GO:0030027   GO:0051489   GO:0032433   GO:0051015   GO:0030833   GO:0048813   GO:0003785  

PANTHER

PTHR13651  

Subcellular location

Nucleus speckle   Localizes to somata and dendrites in cortical neurons.   With evidence from 1 publications.
Cell projection   Localizes to somata and dendrites in cortical neurons.   With evidence from 1 publications.
Lamellipodium   Localizes to somata and dendrites in cortical neurons.   With evidence from 1 publications.
Nucleus   Localizes to somata and dendrites in cortical neurons.   With evidence from 1 publications.
Growth cone   Localizes to somata and dendrites in cortical neurons.   With evidence from 1 publications.
Dendrite   Localizes to somata and dendrites in cortical neurons.   With evidence from 1 publications.

Length:

178

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.11415

Exp number, first 60 AAs:

0.08701

Total prob of N-in:

0.03265

outside

1  -  178

 

 

Pi

172.223295

Theta

154.318735

Tajima's D

-0.495853

CLR

92.664024

CSRT

0.24198790060497

Interpretation

Uncertain