Gene

KWMTBOMO03948

Pre Gene Modal

BGIBMGA002370

Annotation

PREDICTED:_RING_finger_protein_165-like_[Bombyx_mori]

Location

Bomo_Chr7(-):6883085-6884463      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.141 Mitochondrial   Reliability : 1.501 Nuclear   Reliability : 1.32

CDS

ATGGTGCGCGCGGCGGAGGCGCGGCGGGGCGCGTGGCGGGCGGCGCGCGGCGCGTCGCGGGCCGTCATCGACCGCAACACGTACCGACACGCGTACGCACGGCCCGCGCCGCACCACCAGGACGAGAAGTGCACCATCTGTCTCTCGATCTTCGAAGTCGATTCCGACTGCAGGCGACTGCCATGTATGCACTTGTTCCACATGGAGTGCGTGGACCAGTGGCTCAGCACCAACAAACACTGCCCAATATGCCGTGTCGATATCGAGACCCATCTCAGCAAAGATGCTACATTCTAA

Protein

MVRAAEARRGAWRAARGASRAVIDRNTYRHAYARPAPHHQDEKCTICLSIFEVDSDCRRLPCMHLFHMECVDQWLSTNKHCPICRVDIETHLSKDATF

Uniprot

H9IYN6   A0A194QZ80   A0A194PN84   A0A2H1VZN0   A0A2W1BX48   A0A2A4JBG7   + More
A0A212EJD3   A0A3S2NDS6   A0A1B0GPE1   A0A0A1XEK0   W8B0M8   A0A1L8DSN5   B4JSW9   A0A0K8UQC8   A0A034VUF1   A0A0K8UKW4   A0A1I8M6L2   A0A1I8M6K1   E0VUK5   A0A1B0AAE4   B4N985   A0A1I8P3N4   T1PH88   B4M4W3   B4KE11   A0A1I8P3K0   A0A1L8DSD7   A0A1L8DSE5   A0A0M4EQ54   Q17CZ5   A0A3B0KP84   B4GMG5   B3M1G1   Q294Y8   A0A1B0BBZ7   A0A1A9UNA7   A0A1B0G6T6   A0A1S4F7I8   A0A1A9YK63   A0A1B0BBZ0   A0A2M4B8X4   W5J9J1   T1J3R7   A0A1W4WD99   A0A084W4Y3   A0A161MCS2   B3P4F7   A0A067RI14   A0A182Q0X6   Q6AWE3   B4PU13   A0A182N6Q2   A0A0V0G7T9   A0A023F9J9   A0A069DRJ1   A0A182K899   Q9VGI6   A0A0P4VFG6   B4HHX6   A0A0B4KFN6   A0A1B6KDK0   R4G894   A0A182XVM0   A0A1B6JI86   A0A182MCM6   A0A2J7R070   A0A2J7R077   A0A1B6JGD4   A0A2J7R093   A0A0A9X697   A0A0A9YI88   A0A182FAA9   A0A182M118   A0A224XC14   F5HKZ5   A0A2H8TNQ5   A0A182PFG6   A0A182UQP0   A0A0A9X471   A0A1Z5L2Y5   V5IGS9   A0A182RIE4   A0A1B6GE94   A0A1B6DPW7   J9KE74   A0A182W0F3   A0A1B6CMC4   A0A2R5LJW4   A0A2S2P6F8   A0A2S2R0E3   W4XRV5   A0A1B6ISD4   A0A2C9LV90   A0A2C9LV75   A0A1S3JE94   A0A1S3NPE3   A0A182XEB3   G1MRL7   A0A182HJ09  

Pubmed

19121390    26354079    28756777    22118469    25830018    24495485    + More
17994087    25348373    25315136    20566863    17510324    15632085    20920257    23761445    24438588    24845553    17550304    25474469    26334808    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    27129103    25244985    25401762    26823975    12364791    14747013    17210077    28528879    25765539    15562597    20838655   

EMBL

BABH01043948    KQ460930    KPJ10767.1    KQ459600    KPI94199.1    ODYU01005440    + More
SOQ46291.1    KZ149930    PZC77390.1    NWSH01002016    PCG69415.1    AGBW02014474    OWR41612.1    RSAL01000183    RVE44869.1    AJVK01059559    GBXI01004912    JAD09380.1    GAMC01019759    GAMC01019758    GAMC01019757    JAB86796.1    GFDF01004700    JAV09384.1    CH916373    EDV94859.1    GDHF01023749    GDHF01016090    JAI28565.1    JAI36224.1    GAKP01013799    JAC45153.1    GDHF01024995    JAI27319.1    DS235786    EEB17061.1    CH964232    EDW81632.2    KA648044    AFP62673.1    CH940652    EDW59674.2    CH933806    EDW16032.2    GFDF01004701    JAV09383.1    GFDF01004702    JAV09382.1    CP012526    ALC47064.1    CH477301    EAT44264.1    OUUW01000014    SPP88429.1    CH479185    EDW38039.1    CH902617    EDV43252.2    CM000070    EAL28824.3    JXJN01011735    CCAG010013872    GGFJ01000342    MBW49483.1    ADMH02002087    ETN59409.1    JH431830    ATLV01020424    KE525302    KFB45277.1    GEMB01001197    JAS01951.1    CH954181    EDV49472.1    KK852669    KDR18887.1    AXCN02000219    BT015305    AAT94533.1    CM000160    EDW97663.2    GECL01002159    JAP03965.1    GBBI01000647    JAC18065.1    GBGD01002583    JAC86306.1    AE014297    AY058520    BT050479    AAF54693.1    AAL13749.1    ACJ13186.1    GDKW01003930    JAI52665.1    CH480815    EDW42558.1    AGB95866.1    GEBQ01030456    JAT09521.1    GAHY01001367    JAA76143.1    GECU01008796    JAS98910.1    AXCM01001088    NEVH01008287    PNF34226.1    PNF34224.1    GECU01009488    JAS98218.1    PNF34225.1    GBHO01028090    GBHO01012267    GDHC01003551    JAG15514.1    JAG31337.1    JAQ15078.1    GBHO01012270    GBHO01012263    JAG31334.1    JAG31341.1    AXCM01007326    GFTR01006481    JAW09945.1    AAAB01008879    EGK96956.1    GFXV01003970    MBW15775.1    GBHO01028092    GBHO01012264    JAG15512.1    JAG31340.1    GFJQ02005412    JAW01558.1    GANP01006157    JAB78311.1    GECZ01009011    JAS60758.1    GEDC01014277    GEDC01009635    JAS23021.1    JAS27663.1    ABLF02040908    GEDC01022763    GEDC01011046    JAS14535.1    JAS26252.1    GGLE01005665    MBY09791.1    GGMR01012420    MBY25039.1    GGMS01014181    MBY83384.1    AAGJ04051453    GECU01017899    JAS89807.1    APCN01002114   

Proteomes

UP000005204    UP000053240    UP000053268    UP000218220    UP000007151    UP000283053    + More
UP000092462    UP000001070    UP000095301    UP000009046    UP000092445    UP000007798    UP000095300    UP000008792    UP000009192    UP000092553    UP000008820    UP000268350    UP000008744    UP000007801    UP000001819    UP000092460    UP000078200    UP000092444    UP000092443    UP000000673    UP000192221    UP000030765    UP000008711    UP000027135    UP000075886    UP000002282    UP000075884    UP000075881    UP000000803    UP000001292    UP000076408    UP000075883    UP000235965    UP000069272    UP000007062    UP000075885    UP000075903    UP000075900    UP000007819    UP000075920    UP000007110    UP000076420    UP000085678    UP000087266    UP000076407    UP000001645    UP000075840   

PRIDE

H9IYN6    Q6AWE3    Q9VGI6   

Pfam

PF13639   zf-RING_2        + More
PF16367   RRM_7
PF16366   CEBP_ZZ
PF06911   Senescence
PF01663   Phosphodiest
PF00076   RRM_1
PF02037   SAP

Interpro

IPR001841   Znf_RING        + More
IPR013083   Znf_RING/FYVE/PHD       
IPR000504   RRM_dom       
IPR034819   CPEB       
IPR038446   CEBP_ZZ_sf       
IPR012677   Nucleotide-bd_a/b_plait_sf       
IPR035979   RBD_domain_sf       
IPR032296   CEBP_ZZ       
IPR009686   Senescence/spartin       
IPR017850   Alkaline_phosphatase_core_sf       
IPR036361   SAP_dom_sf       
IPR002591   Phosphodiest/P_Trfase       
IPR003034   SAP_dom       
IPR011016   Znf_RING-CH       
IPR019007   WW_dom-bd_prot_11       

SUPFAM

SSF54928   SSF54928        + More
SSF53649   SSF53649       
SSF68906   SSF68906       

Gene 3D

3.30.40.10     3.30.40.130     3.30.70.330     1.10.720.30     3.40.720.10    

ProteinModelPortal

H9IYN6   A0A194QZ80   A0A194PN84   A0A2H1VZN0   A0A2W1BX48   A0A2A4JBG7   + More
A0A212EJD3   A0A3S2NDS6   A0A1B0GPE1   A0A0A1XEK0   W8B0M8   A0A1L8DSN5   B4JSW9   A0A0K8UQC8   A0A034VUF1   A0A0K8UKW4   A0A1I8M6L2   A0A1I8M6K1   E0VUK5   A0A1B0AAE4   B4N985   A0A1I8P3N4   T1PH88   B4M4W3   B4KE11   A0A1I8P3K0   A0A1L8DSD7   A0A1L8DSE5   A0A0M4EQ54   Q17CZ5   A0A3B0KP84   B4GMG5   B3M1G1   Q294Y8   A0A1B0BBZ7   A0A1A9UNA7   A0A1B0G6T6   A0A1S4F7I8   A0A1A9YK63   A0A1B0BBZ0   A0A2M4B8X4   W5J9J1   T1J3R7   A0A1W4WD99   A0A084W4Y3   A0A161MCS2   B3P4F7   A0A067RI14   A0A182Q0X6   Q6AWE3   B4PU13   A0A182N6Q2   A0A0V0G7T9   A0A023F9J9   A0A069DRJ1   A0A182K899   Q9VGI6   A0A0P4VFG6   B4HHX6   A0A0B4KFN6   A0A1B6KDK0   R4G894   A0A182XVM0   A0A1B6JI86   A0A182MCM6   A0A2J7R070   A0A2J7R077   A0A1B6JGD4   A0A2J7R093   A0A0A9X697   A0A0A9YI88   A0A182FAA9   A0A182M118   A0A224XC14   F5HKZ5   A0A2H8TNQ5   A0A182PFG6   A0A182UQP0   A0A0A9X471   A0A1Z5L2Y5   V5IGS9   A0A182RIE4   A0A1B6GE94   A0A1B6DPW7   J9KE74   A0A182W0F3   A0A1B6CMC4   A0A2R5LJW4   A0A2S2P6F8   A0A2S2R0E3   W4XRV5   A0A1B6ISD4   A0A2C9LV90   A0A2C9LV75   A0A1S3JE94   A0A1S3NPE3   A0A182XEB3   G1MRL7   A0A182HJ09  

PDB

5D0I     E-value=5.10206e-19,     Score=225

KEGG

101743865    no KO assigned | (RefSeq) RING finger protein 165-like

GO

GO:0016874   GO:0003730   GO:0045182   GO:0008270   GO:0003824   GO:0003723   GO:0006511   GO:0030433   GO:0061630   GO:0045292   GO:0005634   GO:0000209   GO:0060384   GO:0032991   GO:0008045   GO:0030163   GO:0061061   GO:0010259   GO:0030513   GO:0035136   GO:0005515   GO:0006919   GO:0016573   GO:0006325   GO:0043565   GO:0016021   GO:0004672   GO:0048384  

PANTHER

PTHR12566   PTHR13361  

Length:

98

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.57353

inside

1  -  98

 

 

Pi

240.785883

Theta

164.721959

Tajima's D

1.504128

CLR

0.059641

CSRT

0.788310584470777

Interpretation

Uncertain