Gene

KWMTBOMO03944

Pre Gene Modal

BGIBMGA010233

Annotation

PREDICTED:_cysteine-rich_hydrophobic_domain-containing_protein_2_[Papilio_xuthus]

Location

Bomo_Chr7(+):6850964-6854758      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.207 Nuclear   Reliability : 1.579

CDS

ATGGCAGATTTTGATGCTATTTATCCAGATGATCTCGATGACGGTGAAGAAAATATAGAGGAGATGCATGTGACATTAGTGCCAGATCCGATAGTTGTTCGTGGAGCTGGAAATATGACAGTCTTTGGATTAAGTAATCGCTTCAATGGAGAATTTCCTTCTGGTCTTCAATCACGTGTTGCTCCTGAAGAATACCAAGCAACCATAGCTCGTATTAACACAGTTCTCAAGAAGACATTACCTGTAAATGTGAAGTGGTTATTCTGCGGATGTGTCTGTTGTTGCTGCACATTAGGATGCTCTCTATGGCCCGTCATATGTCTTAGTAAAAGGACTCAGCATTCTCTGAACAAGCTCCTGGAATGGGAGAACAGTCGTCTTTATAATAAGCTAGGACTTCGCTGGAGACTCACAAAACAGCATTGCGATTCTTCGTCTATGATGGAGTATGTACTTCTTATAGAATTTATACCCAAAATACCAATTTACAGGCCTGATTAA

Protein

MADFDAIYPDDLDDGEENIEEMHVTLVPDPIVVRGAGNMTVFGLSNRFNGEFPSGLQSRVAPEEYQATIARINTVLKKTLPVNVKWLFCGCVCCCCTLGCSLWPVICLSKRTQHSLNKLLEWENSRLYNKLGLRWRLTKQHCDSSSMMEYVLLIEFIPKIPIYRPD

Uniprot

H9JL32   A0A2W1BUT4   A0A2A4K103   A0A2H1VZM6   A0A194PMI7   A0A194R0J7   + More
A0A1E1W603   A0A212EW09   A0A0L7KUX1   A0A084W0M5   A0A182NQM8   A0A182PRQ7   A0A182VEV4   A0A182VVV9   Q7PX89   A0A182RA36   A0A182HKG6   A0A182K7S4   A0A182L8P3   A0A182X9I3   A0A182QGZ0   A0A182ILM0   A0A182YBG7   A0A182M3I7   A0A1B0CZ43   Q16XB0   A0A2P8ZM77   A0A1Q3FA01   B0X1C5   A0A023EHR9   A0A026WPA0   A0A1L8D9G1   A0A0T6ATX6   A0A182HCN7   E2A3K6   A0A232FID7   K7ISK9   A0A158NGA1   A0A2A3EGY2   V9II30   A0A088ATF5   E0W1C3   A0A0L7RJM3   A0A151IKR5   A0A1V1FVN7   A0A2J7R1P8   A0A0A9YS74   A0A2M3Z955   A0A2M4APW5   W5JAA7   A0A182FRN2   A0A310SC34   U5EXQ4   T1D331   D7EII4   A0A1A9X1R4   A0A067R0S3   A0A1I8MFL7   A0A0L0CHW5   A0A0K8V1N0   A0A034WG54   A0A0A1XAZ7   A0A1W4XL76   A0A1A9YCQ7   A0A1A9VPE2   A0A1B0AA49   A0A1I8PD17   A0A182TQ79   B4K780   E9J9C2   A0A224XZI1   A0A0P4VV38   A0A023F9G3   R4G8K5   A0A069DPL1   A0A0M3QYA3   B4NF71   B4M081   A0A195EU33   A0A195B9X3   B4JRU1   B3LXL5   A0A195E5F2   A0A2R5L7X9   A0A3B0JJL7   Q29A50   B4G3W3   A0A1B6LZ20   A0A023GIK9   G3MMQ7   S4NX35   A0A1W4UCW0   B4NT74   B4PRS4   B4IC75   B3P628   Q0KI06   N6UNK0   A0A0L8HES6   A0A293N495  

Pubmed

19121390    28756777    26354079    22118469    26227816    24438588    + More
12364791    14747013    17210077    20966253    25244985    17510324    29403074    24945155    24508170    30249741    26483478    20798317    28648823    20075255    21347285    20566863    28410430    25401762    26823975    20920257    23761445    24330624    18362917    19820115    24845553    25315136    26108605    25348373    25830018    17994087    21282665    27129103    25474469    26334808    18057021    15632085    22216098    23622113    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    23537049   

EMBL

BABH01011541    BABH01011542    KZ149930    PZC77394.1    NWSH01000258    PCG77951.1    + More
ODYU01005440    SOQ46295.1    KQ459600    KPI94203.1    KQ460930    KPJ10770.1    GDQN01008685    JAT82369.1    AGBW02012104    OWR45669.1    JTDY01005509    KOB66930.1    ATLV01019123    KE525262    KFB43769.1    AAAB01008987    EAA01727.3    APCN01000829    AXCN02001513    AXCM01000480    AJVK01020610    AJVK01020611    CH477543    EAT39264.1    PYGN01000018    PSN57589.1    GFDL01010640    JAV24405.1    DS232258    EDS38574.1    GAPW01005172    JAC08426.1    KK107139    QOIP01000003    EZA57793.1    RLU24695.1    GFDF01011097    JAV02987.1    LJIG01022862    KRT78341.1    JXUM01033473    KQ560989    KXJ80109.1    GL436444    EFN71988.1    NNAY01000198    OXU30067.1    ADTU01015087    KZ288253    PBC30968.1    JR046140    AEY60141.1    DS235869    EEB19429.1    KQ414578    KOC71157.1    KQ977164    KYN05207.1    FX985445    BAX07458.1    NEVH01008204    PNF34751.1    GBHO01007717    GBRD01017387    GDHC01003073    JAG35887.1    JAG48440.1    JAQ15556.1    GGFM01004290    MBW25041.1    GGFK01009327    MBW42648.1    ADMH02002066    ETN59714.1    KQ797156    OAD46990.1    OAD46992.1    GANO01000832    JAB59039.1    GALA01001408    JAA93444.1    DS497681    EFA12033.1    KK852790    KDR16505.1    JRES01000378    KNC31836.1    GDHF01032233    GDHF01026718    GDHF01024115    GDHF01020483    GDHF01019616    GDHF01006695    JAI20081.1    JAI25596.1    JAI28199.1    JAI31831.1    JAI32698.1    JAI45619.1    GAKP01005830    GAKP01005829    GAKP01005828    GAKP01005827    JAC53125.1    GBXI01015298    GBXI01009640    GBXI01005803    GBXI01004955    JAC98993.1    JAD04652.1    JAD08489.1    JAD09337.1    CH933806    EDW16393.1    GL769262    EFZ10577.1    GFTR01002753    JAW13673.1    GDKW01000693    JAI55902.1    GBBI01000575    JAC18137.1    GAHY01000812    JAA76698.1    GBGD01003263    JAC85626.1    CP012526    ALC47269.1    CH964251    EDW82938.1    CH940650    EDW67243.1    KQ981965    KYN31760.1    KQ976542    KYM81037.1    CH916373    EDV94481.1    CH902617    EDV43909.1    KPU80529.1    KQ979608    KYN20388.1    GGLE01001439    MBY05565.1    OUUW01000005    SPP80973.1    CM000070    EAL27501.1    CH479179    EDW25068.1    GEBQ01011107    JAT28870.1    GBBM01002823    JAC32595.1    JO843158    AEO34775.1    GAIX01014340    JAA78220.1    CH982788    EDX15764.1    CM000160    EDW98517.1    CH480828    EDW45233.1    CH954182    EDV53428.1    AE014297    AAF56693.1    AAN14108.1    AAN14109.1    AAN14110.1    ABW08785.2    APGK01024803    KB740562    KB632399    ENN80307.1    ERL94791.1    KQ418338    KOF87702.1    GFWV01023217    MAA47944.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000037510    + More
UP000030765    UP000075884    UP000075885    UP000075903    UP000075920    UP000007062    UP000075900    UP000075840    UP000075881    UP000075882    UP000076407    UP000075886    UP000075880    UP000076408    UP000075883    UP000092462    UP000008820    UP000245037    UP000002320    UP000053097    UP000279307    UP000069940    UP000249989    UP000000311    UP000215335    UP000002358    UP000005205    UP000242457    UP000005203    UP000009046    UP000053825    UP000078542    UP000235965    UP000000673    UP000069272    UP000007266    UP000091820    UP000027135    UP000095301    UP000037069    UP000192223    UP000092443    UP000078200    UP000092445    UP000095300    UP000075902    UP000009192    UP000092553    UP000007798    UP000008792    UP000078541    UP000078540    UP000001070    UP000007801    UP000078492    UP000268350    UP000001819    UP000008744    UP000192221    UP000000304    UP000002282    UP000001292    UP000008711    UP000000803    UP000019118    UP000030742    UP000053454   

PRIDE

H9JL32    Q0KI06   

Pfam

PF10256   Erf4

Interpro

IPR019383   Golgin_A_7/ERF4        + More
IPR039735   CHIC1/2       

ProteinModelPortal

H9JL32   A0A2W1BUT4   A0A2A4K103   A0A2H1VZM6   A0A194PMI7   A0A194R0J7   + More
A0A1E1W603   A0A212EW09   A0A0L7KUX1   A0A084W0M5   A0A182NQM8   A0A182PRQ7   A0A182VEV4   A0A182VVV9   Q7PX89   A0A182RA36   A0A182HKG6   A0A182K7S4   A0A182L8P3   A0A182X9I3   A0A182QGZ0   A0A182ILM0   A0A182YBG7   A0A182M3I7   A0A1B0CZ43   Q16XB0   A0A2P8ZM77   A0A1Q3FA01   B0X1C5   A0A023EHR9   A0A026WPA0   A0A1L8D9G1   A0A0T6ATX6   A0A182HCN7   E2A3K6   A0A232FID7   K7ISK9   A0A158NGA1   A0A2A3EGY2   V9II30   A0A088ATF5   E0W1C3   A0A0L7RJM3   A0A151IKR5   A0A1V1FVN7   A0A2J7R1P8   A0A0A9YS74   A0A2M3Z955   A0A2M4APW5   W5JAA7   A0A182FRN2   A0A310SC34   U5EXQ4   T1D331   D7EII4   A0A1A9X1R4   A0A067R0S3   A0A1I8MFL7   A0A0L0CHW5   A0A0K8V1N0   A0A034WG54   A0A0A1XAZ7   A0A1W4XL76   A0A1A9YCQ7   A0A1A9VPE2   A0A1B0AA49   A0A1I8PD17   A0A182TQ79   B4K780   E9J9C2   A0A224XZI1   A0A0P4VV38   A0A023F9G3   R4G8K5   A0A069DPL1   A0A0M3QYA3   B4NF71   B4M081   A0A195EU33   A0A195B9X3   B4JRU1   B3LXL5   A0A195E5F2   A0A2R5L7X9   A0A3B0JJL7   Q29A50   B4G3W3   A0A1B6LZ20   A0A023GIK9   G3MMQ7   S4NX35   A0A1W4UCW0   B4NT74   B4PRS4   B4IC75   B3P628   Q0KI06   N6UNK0   A0A0L8HES6   A0A293N495  

KEGG

101743898    no KO assigned | (RefSeq) cysteine-rich hydrophobic domain-containing protein 2

GO

GO:0016021  

PANTHER

PTHR13005  

Length:

166

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

17.29791

Exp number, first 60 AAs:

0.04785

Total prob of N-in:

0.23804

outside

1  -  85

TMhelix

86  -  108

inside

109  -  166

 

 

Pi

169.127985

Theta

157.577338

Tajima's D

0.702736

CLR

0.001288

CSRT

0.572121393930303

Interpretation

Uncertain