SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03943  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA010140
Annotation
cuticular_protein_RR-2_motif_73_precursor_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 2.24
 

Sequence

CDS
ATGGTCGTTTGTTATACGGTTAGACCACTAGGTCTAGCGGCTCCATTGGCTGTTGCCCGTCCAGCTCTCGCTTCGTACGCTGTAGCTCCAGCAATAGCTAAAGTTGCCGCTCCAGTCGAGGAATACGATCCAAACCCACAGTATTCTTACGCTTATGACATTCAGGACGCTATCACCGGTGACTCAAAGAGCCAGCAAGAGTCTCGTTCTGGTGATGTCGTCCAAGGCTCATACTCCCTGGTCGAACCAGACGGCACCCGTCGTATCGTCGAGTATACCGCCGACCCTCACAATGGTTTCAACGCTGTCGTACACAAAGAACCCATTGGTGGCGTCGTTGCGAAAGCTGTAGCGCCTGCCTACCTCCACTAG
Protein
MVVCYTVRPLGLAAPLAVARPALASYAVAPAIAKVAAPVEEYDPNPQYSYAYDIQDAITGDSKSQQESRSGDVVQGSYSLVEPDGTRRIVEYTADPHNGFNAVVHKEPIGGVVAKAVAPAYLH

Summary

Uniprot
ProteinModelPortal

Ontologies

Topology

Length:
123
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.72566
Exp number, first 60 AAs:
0.72296
Total prob of N-in:
0.23397
outside
1  -  123
 
 

Population Genetic Test Statistics

Pi
184.678242
Theta
187.786816
Tajima's D
-0.400158
CLR
232.568597
CSRT
0.266736663166842
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
28467696 TVEYTADPHNGFNAVVHR 95.24 1e-09
23174119 -.FKFTDSEINEIVHPLSMR.- 100.00 2e-06
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