Silkworm Genome Informatics Database

Gene

KWMTBOMO03942

Pre Gene Modal

BGIBMGA010141

Annotation

cuticular_protein_RR-2_motif_72_[Bombyx_mori]

Location

Bomo_Chr7(-):6832736-6836093 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.114 Extracellular Reliability : 1.388 Nuclear Reliability : 1.538

CDS

ATGCTAAGGGAATCGTTGATATTATGCACAATACCAGCAGTGATCAGTATTATTGTGAAAGATCCGCCACCTACACCAAACGACTACAAATATTCATACAGTATAGAGGACCCGACAACGGGAGACAGTAAAAGTCAGCACGAAGTACGCCAAGGAGATCTTATAACAGGAGCGTACTCTGTTGTAGACCCTGACGGAAGGAAACGTATTGTAGAATATACAGCAGACTCAAAAAACGGCTTCAAAGCAATAGTTAGAGAAGAACCATCGGAAACACATCAACCGCTAAACCCTACACCGACATTACAGTTACAAAACCGGAATTATGTCGATAGAGTGAACCAATTTCCGGTTTTCGGTCCAAGGTTATCGAATAATGGAGTGCGGGTTCCGTTCATGTCATATTATCCTAAGCAGCAGATTTATTTCACAGCACATAATGAGATCAAAGCGGAAGACATTGTATTTCCACGCGGACAATATTTCTTACCGGCCACCAAATGA

Protein

MLRESLILCTIPAVISIIVKDPPPTPNDYKYSYSIEDPTTGDSKSQHEVRQGDLITGAYSVVDPDGRKRIVEYTADSKNGFKAIVREEPSETHQPLNPTPTLQLQNRNYVDRVNQFPVFGPRLSNNGVRVPFMSYYPKQQIYFTAHNEIKAEDIVFPRGQYFLPATK

Uniprot

C0H6R4 A0A2A4K1Q1 A0A2W1BXJ4 A0A3S2TMX5 A0A0L7K433 A0A194PSV1 + More
A0A212EW29 A0A1B6M9D6

Pubmed

19121390 19280704 28756777 26227816 26354079 22118469 + More

EMBL

BABH01011540 BR000573 FAA00575.1 NWSH01000258 PCG77956.1 KZ149930 + More
PZC77396.1 RSAL01000049 RVE50414.1 JTDY01011020 KOB57682.1 KQ459600 KPI94205.1 AGBW02012104 OWR45667.1 GEBQ01007448 JAT32529.1

Proteomes

UP000005204 UP000218220 UP000283053 UP000037510 UP000053268 UP000007151 + More

PRIDE

C0H6R4

Pfam

PF00379 Chitin_bind_4

Interpro

IPR031311 CHIT_BIND_RR_consensus + More
IPR000618 Insect_cuticle

ProteinModelPortal

C0H6R4 A0A2A4K1Q1 A0A2W1BXJ4 A0A3S2TMX5 A0A0L7K433 A0A194PSV1 + More
A0A212EW29 A0A1B6M9D6

KEGG

100379401 no KO assigned | (RefSeq) CPR72, BmorCPR72; cuticular protein RR-2 motif 72

GO

GO:0042302 GO:0016021 GO:0005740 GO:0006348 GO:0016573 GO:0006325 GO:0043565 GO:0004672 GO:0048384

Length:

167

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0390400000000001

Exp number, first 60 AAs:

0.03884

Total prob of N-in:

0.06402

outside

1 - 167

Pi

395.248546

Theta

176.211091

Tajima's D

2.723023

CLR

0.089438

CSRT

0.96285185740713

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics