Gene

KWMTBOMO03941

Annotation

Cytochrome_c_oxidase?_subunit_VB_[Operophtera_brumata]

Location

Bomo_Chr7(+):6829034-6830025      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.124

CDS

ATGTTATTAAAATCGTTGCACGGCGTCTCGAGGCTTGGAGTCCGATTCTATAGAAAACTAATTGACCCTTTGGACCTTTTGACCGGCATCGAGAAACGTGAATTACTCGCGCATTTAGCGGGAGATTGCGATCCATTCCGTATTCTTTCCATCAAGAAAGGACCCGGAACACGCGAGCGTCCGAACTTGATACCCAGCTCAAACTCATCTCGTCTCATTTGCTGTCATTGTACCGAGTCGGACAACCATCTGAAATTTATGTGGCTACACCAAGGAGATCCAAAACGATGCGGCTGTGGATACTGGTTTGAATTATGTCCAATTGCACCGCTTTGA

Protein

MLLKSLHGVSRLGVRFYRKLIDPLDLLTGIEKRELLAHLAGDCDPFRILSIKKGPGTRERPNLIPSSNSSRLICCHCTESDNHLKFMWLHQGDPKRCGCGYWFELCPIAPL

Uniprot

A0A2H1VZT3   A0A0L7KRU6   A0A2W1BW14   A0A2A4K137   A0A194PL96   A0A194QZ11   + More
A0A1Q3FLL9   B0WCK5   T1E2M8   A0A1J1IX25   Q16KF9   A0A023EFA1   A0A336K576   A0A084VMI7   A0A2C9GS36   A0A182TNH5   A0A182X689   Q7Q8A5   A0A182KWG6   A0A182VGL0   A0A1I8JUC3   A0A182PZP0   A0A2M3Z073   A0A2M4A725   W5JF68   A0A182J2M3   A0A182VTH1   A0A182YLP7   A0A182M3A0   D1FQ49   A0A1B0D7B4   A0A0A9WPB8   C4WT13   U5EU55   A0A1A9W3X6   A0A182P6F8   A0A1L8E0V3   A0A2S2QFC5   A0A1L8E0Q0   A0A0K8TQP3   A0A2R7W420   A0A1L8EHE8   A0A1E1WYG5   U5ENK9   A0A1L8EHG0   J9K241   D3TME4   A0A1A9XS56   A0A1A9V5P2   A0A1B0C0F6   A0A1B0A281   T1PGR4   C9W1M6   A0A023FGJ3   A0A0C9RS55   A0A1I8NSH2   A0A1E1XJ21   A0A3B0K9M4   B4GKI9   Q29PD0   B3MNZ4   A0A0K8W8P1   A0A1V9XYS8   A0A1D1VGR8   G3MMR9   A0A034WX64   A0A0L0C4C8   A0A023FTL5   B4MUJ3   Q4PM33   B7PVS1   W8AQE8   A0A059NTZ3   A0A0P4WT22   A0A0P5GPH4   K7J3T5   A0A0T6AYP0   A0A224YWP0   A0A131Z5N9   B4HXT9   A2TDX1   Q9VMB9   B3N5T2   A0A023JPB4   Q6XHY7   A0A1W4UBM2   C9W1K7   A0A0N8A604   A0A2H8TVH2   A0A232F9F6   A0A0P5GKF6   A0A0N8ARS4   A0A164YUD5   A0A2D1CK49   A0A131XPF8   A0A0P5SGQ1   A2TDW5   B4JR97   A0A0P5PGQ1  

Pubmed

26227816    28756777    26354079    24330624    17510324    24945155    + More
26483478    24438588    12364791    14747013    17210077    20966253    20920257    23761445    25244985    25401762    26823975    26369729    28503490    20353571    25315136    20650005    24029695    26131772    29209593    17994087    15632085    23185243    28327890    27649274    22216098    25348373    26108605    16431279    24495485    20075255    28797301    26830274    17598752    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    14525923    17550304    28648823    28049606   

EMBL

ODYU01005440    SOQ46297.1    JTDY01006746    KOB65724.1    KZ149930    PZC77397.1    + More
NWSH01000258    PCG77957.1    KQ459600    KPI94206.1    KQ460930    KPJ10773.1    GFDL01006652    JAV28393.1    DS231888    EDS43576.1    GALA01000559    JAA94293.1    CVRI01000063    CRL04250.1    CH477960    CH477527    EAT34781.1    EAT39520.1    JXUM01046583    GAPW01006132    KQ561483    JAC07466.1    KXJ78435.1    UFQS01000101    UFQT01000101    SSW99611.1    SSX19991.1    ATLV01014596    KE524975    KFB39181.1    APCN01000664    AAAB01008944    EAA10211.2    AXCN02000614    GGFM01001181    MBW21932.1    GGFK01003221    MBW36542.1    ADMH02001658    ETN61530.1    AXCM01006241    EZ419949    ACZ28304.1    AJVK01026797    GBHO01036929    GBRD01013879    GDHC01021925    JAG06675.1    JAG51947.1    JAP96703.1    ABLF02037584    AK340419    BAH71033.1    GANO01004033    JAB55838.1    GFDF01001775    JAV12309.1    GGMS01007221    MBY76424.1    GFDF01001774    JAV12310.1    GDAI01001383    JAI16220.1    KK854310    PTY14473.1    GFDG01000715    JAV18084.1    GFAC01007118    JAT92070.1    GANO01004032    JAB55839.1    GFDG01000705    JAV18094.1    ABLF02038262    EZ422596    ADD18872.1    JXJN01023588    KA647340    AFP61969.1    EZ406178    ACX53973.1    GBBK01004636    GBBK01004635    GBBK01004634    GBBK01004633    JAC19848.1    GBZX01002674    JAG90066.1    GFAA01004221    JAT99213.1    OUUW01000006    SPP82346.1    CH479184    EDW37155.1    CH379058    CH675624    EAL34363.1    EDY71803.1    CH902620    EDV32181.1    GDHF01004741    JAI47573.1    MNPL01002008    OQR78621.1    BDGG01000005    GAU98967.1    JO843170    AEO34787.1    GAKP01000157    JAC58795.1    JRES01000933    KNC27155.1    GBBL01002303    JAC25017.1    CH963857    EDW76188.1    DQ066295    AAY66932.1    ABJB010700022    DS802112    EEC10693.1    GAMC01018268    JAB88287.1    KF863527    AHL43267.1    GDIP01253541    JAI69860.1    GDIQ01241468    JAK10257.1    LJIG01022515    KRT80170.1    GFPF01007064    MAA18210.1    GEDV01002465    JAP86092.1    CH480818    EDW51869.1    EF189527    CM000361    CM002910    ABM88305.1    EDX03974.1    KMY88545.1    AE014134    AY070965    AAF52402.1    AAL48587.1    AHN54193.1    CH954177    EDV59091.1    KF863516    KF863517    KF863518    KF863519    KF863520    KF863521    KF863522    KF863523    KF863524    KF863525    KF863526    KF863528    KF863529    KF863530    AHL43256.1    AHL43257.1    AHL43258.1    AHL43259.1    AHL43260.1    AHL43261.1    AHL43262.1    AHL43263.1    AHL43264.1    AHL43265.1    AHL43266.1    AHL43268.1    AHL43269.1    AHL43270.1    AY231962    AY232045    KF863531    KF863532    KF863533    KF863534    KF863535    KF863536    KF863537    KF863538    KF863539    KF863540    KF863541    KF863542    KF863543    KF863544    CM000157    AAR10068.1    AHL43271.1    AHL43272.1    AHL43273.1    AHL43274.1    AHL43275.1    AHL43276.1    AHL43277.1    AHL43278.1    AHL43279.1    AHL43280.1    AHL43281.1    AHL43282.1    AHL43283.1    AHL43284.1    EDW87878.1    EZ406158    ACX53954.1    GDIP01179105    JAJ44297.1    GFXV01006460    MBW18265.1    NNAY01000665    OXU27100.1    GDIQ01239967    JAK11758.1    GDIQ01249267    JAK02458.1    LRGB01000868    KZS15614.1    KY287666    ATN38936.1    GEFH01000349    JAP68232.1    GDIP01139957    JAL63757.1    EF189521    EF189522    EF189523    EF189524    EF189525    EF189526    EF189528    EF189529    ABM88299.1    ABM88300.1    ABM88301.1    ABM88302.1    ABM88303.1    ABM88304.1    ABM88306.1    CH916372    EDV99427.1    GDIQ01128705    JAL23021.1   

Proteomes

UP000037510    UP000218220    UP000053268    UP000053240    UP000002320    UP000183832    + More
UP000008820    UP000069940    UP000249989    UP000030765    UP000075840    UP000075902    UP000076407    UP000007062    UP000075882    UP000075903    UP000075900    UP000075886    UP000000673    UP000075880    UP000075920    UP000076408    UP000075883    UP000092462    UP000007819    UP000091820    UP000075885    UP000092443    UP000078200    UP000092460    UP000092445    UP000095301    UP000095300    UP000268350    UP000008744    UP000001819    UP000007801    UP000192247    UP000186922    UP000037069    UP000007798    UP000001555    UP000002358    UP000001292    UP000000304    UP000000803    UP000008711    UP000002282    UP000192221    UP000215335    UP000076858    UP000001070   

Pfam

PF01215   COX5B        + More
PF15797   DUF4706

Interpro

IPR002124   Cyt_c_oxidase_su5b        + More
IPR036972   Cyt_c_oxidase_su5b_sf       
IPR031600   DUF4706       

Gene 3D

2.60.11.10    

CDD

cd00924  Cyt_c_Oxidase_Vb

ProteinModelPortal

A0A2H1VZT3   A0A0L7KRU6   A0A2W1BW14   A0A2A4K137   A0A194PL96   A0A194QZ11   + More
A0A1Q3FLL9   B0WCK5   T1E2M8   A0A1J1IX25   Q16KF9   A0A023EFA1   A0A336K576   A0A084VMI7   A0A2C9GS36   A0A182TNH5   A0A182X689   Q7Q8A5   A0A182KWG6   A0A182VGL0   A0A1I8JUC3   A0A182PZP0   A0A2M3Z073   A0A2M4A725   W5JF68   A0A182J2M3   A0A182VTH1   A0A182YLP7   A0A182M3A0   D1FQ49   A0A1B0D7B4   A0A0A9WPB8   C4WT13   U5EU55   A0A1A9W3X6   A0A182P6F8   A0A1L8E0V3   A0A2S2QFC5   A0A1L8E0Q0   A0A0K8TQP3   A0A2R7W420   A0A1L8EHE8   A0A1E1WYG5   U5ENK9   A0A1L8EHG0   J9K241   D3TME4   A0A1A9XS56   A0A1A9V5P2   A0A1B0C0F6   A0A1B0A281   T1PGR4   C9W1M6   A0A023FGJ3   A0A0C9RS55   A0A1I8NSH2   A0A1E1XJ21   A0A3B0K9M4   B4GKI9   Q29PD0   B3MNZ4   A0A0K8W8P1   A0A1V9XYS8   A0A1D1VGR8   G3MMR9   A0A034WX64   A0A0L0C4C8   A0A023FTL5   B4MUJ3   Q4PM33   B7PVS1   W8AQE8   A0A059NTZ3   A0A0P4WT22   A0A0P5GPH4   K7J3T5   A0A0T6AYP0   A0A224YWP0   A0A131Z5N9   B4HXT9   A2TDX1   Q9VMB9   B3N5T2   A0A023JPB4   Q6XHY7   A0A1W4UBM2   C9W1K7   A0A0N8A604   A0A2H8TVH2   A0A232F9F6   A0A0P5GKF6   A0A0N8ARS4   A0A164YUD5   A0A2D1CK49   A0A131XPF8   A0A0P5SGQ1   A2TDW5   B4JR97   A0A0P5PGQ1  

PDB

2Y69     E-value=5.10047e-13,     Score=173

KEGG

101743749    K02265 cytochrome c oxidase subunit 5b | (RefSeq) cytochrome c oxidase subunit 5B, mitochondrial-lik

PATHWAY

00190    Oxidative phosphorylation - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0004129   GO:0005740   GO:0006123   GO:0042776   GO:0005751   GO:0006348   GO:0016573   GO:0006325   GO:0043565   GO:0016021   GO:0004672   GO:0048384  

PANTHER

PTHR10122  

Length:

111

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.05033

outside

1  -  111

 

 

Pi

259.948104

Theta

202.229751

Tajima's D

0.898413

CLR

0

CSRT

0.631868406579671

Interpretation

Uncertain