Silkworm Genome Informatics Database

Gene

KWMTBOMO03940 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010142

Annotation

_putative_cuticle_protein_[Bombyx_mori]

Location

Bomo_Chr7(-):6826965-6827853 View in EpiBrowser

Location in the cell

Extracellular Reliability : 1.375 PlasmaMembrane Reliability : 1.147

CDS

ATGGCCTTCAAGCTCGCTGTCCTGGTCTGCGCATTTGCGGCTGTTCGAGCAGGCTTTGTTCCTGCGGCATACACCGCACATCCTGCTCCAGTCGCATATGCAGCTGCTCCCGTGGTACATGCTGCTCCGGCTGCTCATCTCATACACGCTAGTCCCGTAGCGTACGCCGCCCCATTCGCCAAAGTTGCCGCTGTCGCCCCGGTCGCTAAAGTCGAGGAATACGACGCTCATCCTCAGTACAGCTTCGCTTACGACGTGCAAGACAGTCTAACTGGTGACTCGAAGACTCAACACGAGACCCGCGATGGCGACGTCGTTCAAGGCTCCTACTCCGTCGTTGACCCCGATGGCACCAAGCGCACTGTTGACTACACCGCCGACCCCCACAACGGTTTCAATGCTGTCGTGCACAAGGAGCCCCTCGCCCACGTTGCTAAAGTTGCCAAAATTGCCGCCCCTCTGACCTATGCCGCAGGTCCCCTTGTGCACGCCGCACCCGTTGTGCACGCCGCTCCTATTGTGCACGCCGCTCCCGTGGCCTACTCTGCTCCAATCTACCATCATTAA

Protein

MAFKLAVLVCAFAAVRAGFVPAAYTAHPAPVAYAAAPVVHAAPAAHLIHASPVAYAAPFAKVAAVAPVAKVEEYDAHPQYSFAYDVQDSLTGDSKTQHETRDGDVVQGSYSVVDPDGTKRTVDYTADPHNGFNAVVHKEPLAHVAKVAKIAAPLTYAAGPLVHAAPVVHAAPIVHAAPVAYSAPIYHH

Uniprot

C0H6R3 Q9BPR3 A0A2A4K203 A0A2W1BQU7 A0A0R7JPI3 A0A194R4J0 + More
A0A194QZ16 B2DBJ2 A0A2A4K1L9 I4DMZ9 A0A194PMK1 A0A194QZS3 I4DJK8 I4DJV8 A0A194PN94 A0A194PSV5 A0A3S2LNF3

Pubmed

19121390 19280704 11483438 28756777 26354079 18712529 + More
22651552

EMBL

BABH01011540 BR000572 FAA00574.1 AB047484 BAB32481.1 NWSH01000258 + More
PCG77958.1 KZ149930 PZC77398.1 KP072002 AKQ00283.1 KQ460930 KPJ10776.1 KPJ10778.1 AB264674 BAG30751.1 PCG77959.1 AK402667 BAM19289.1 KQ459600 KPI94218.1 KPJ10784.1 AK401476 BAM18098.1 AK401576 BAM18198.1 KPI94209.1 KPI94210.1 RSAL01000049 RVE50420.1

Proteomes

UP000005204 UP000218220 UP000053240 UP000053268 UP000283053

PRIDE

C0H6R3 Q9BPR3

Pfam

PF00379 Chitin_bind_4

Interpro

IPR000618 Insect_cuticle + More
IPR031311 CHIT_BIND_RR_consensus

ProteinModelPortal

C0H6R3 Q9BPR3 A0A2A4K203 A0A2W1BQU7 A0A0R7JPI3 A0A194R4J0 + More
A0A194QZ16 B2DBJ2 A0A2A4K1L9 I4DMZ9 A0A194PMK1 A0A194QZS3 I4DJK8 I4DJV8 A0A194PN94 A0A194PSV5 A0A3S2LNF3

KEGG

692408 no KO assigned | (RefSeq) CPR71, BmorCPR71, Wcp6, bmwcp6; cuticular protein RR-2 motif 71

GO

GO:0042302 GO:0016021 GO:0005634 GO:0006348 GO:0016573 GO:0006325 GO:0043565 GO:0004672 GO:0048384

SignalP

Position: 1 - 17, Likelihood: 0.915755

Length:

188

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

19.8194

Exp number, first 60 AAs:

17.67672

Total prob of N-in:

0.61583

POSSIBLE N-term signal

sequence

outside

1 - 188

Pi

322.908424

Theta

229.069282

Tajima's D

1.597389

CLR

42.459352

CSRT

0.815209239538023

Interpretation

Uncertain

Source	Sequence	Identity	Evalue
28467696	TVDYSADSVNGFNAVVR	96.15	4e-12
28467696	VEEKEGIPPQQQR	95.83	1e-10
27102218	GIEIGGSR	100.00	7e-07
28467696	DGDVVQGSYSVVDPDGTK	100.00	7e-07
29197581	YVISSGIAGAAAWAVDMDDFR	100.00	7e-07
28467696	DGDVVQGSYSVVDPDGIKR	100.00	6e-06

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree