Silkworm Genome Informatics Database

Gene

KWMTBOMO03936 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010231

Annotation

cuticular_protein_RR-2_motif_68_precursor_[Bombyx_mori]

Location

Bomo_Chr7(+):6809734-6811062 View in EpiBrowser

Location in the cell

Nuclear Reliability : 1.493 PlasmaMembrane Reliability : 1.047

CDS

ATGGCCCTCAAGTTGGTAACCTTTTCTTGCCTTTTGGCTGCCGCTTATGGGAGCGTTGTTCCCGCCGCCTATGCAGCTGCGCCTCTGGTAGCAGCAGCTCCTGCAGTAGCGGCAAGAATCGAAGAATTCGATCCTCTTCCTCAATACAGATTTGGCTATGATGTAGCGGACTCTTTAACCGGTGATTACAAAAGTCAACAAGAAGAACGCAATGGAGATTTGGTTCAAGGATCTTACTCTTTGGTTGAACCCGACGGCACACGTCGTGTCGTGGACTACGCCGCTGACTCCATTAATGGCTTCAATGCCGTAGTACGTAAAGAGCCACTCGTGGCGGCTGCGCCTGCAGTTGTTGCAGAGCCCGCAGTAGTACCCGCTCGTTATGCAGCAGCTCCGGTGGCTGCTGCTCCTGTAGCCGCTGCTCCTATAGCCGCTGCCCCTGTTGCAGCACCGTACTACGCCGCTCGCTACGCAGTTGCTCCTGCATATTCGGCACCCTATGTTACTGCAGCCAGATATGAAGCCGCTCCCTTCGTAGCACGGTACGCTGCTGCTCCAGTAGCTGCTGCACCGGTCGCTGCTGCACCGGCTCCTATCTACGCTCGTTATGCGACCGCACCAGTAGCTCCCGCACCTGTTGTTGCTGCGCGCTACGCAGCTCCTTCCGTAGTTGCAGCACGCTATGCTGCAGCTGGCCCATATGCTGCCTACACAGCTCCATTTTCTGCAGCCTACACAGCTCCATTTTCTGCGGCCTACACCTCATATGCCTCTCCAGTAGCTGCAGCATACACCACCTACACCGCAACGGGACCCGTGTCAGCAGCTCCAGTTGCTGCCGCGTACGCTGCTCCTATCGCTGCGACAGCGGTACCAGCTGTGGCCTCCACCGTTCGTGCAGCTCCCGCTAAGCTCATTGAAACTACAGCTGCTGGATACCGTTACCCCTAA

Protein

MALKLVTFSCLLAAAYGSVVPAAYAAAPLVAAAPAVAARIEEFDPLPQYRFGYDVADSLTGDYKSQQEERNGDLVQGSYSLVEPDGTRRVVDYAADSINGFNAVVRKEPLVAAAPAVVAEPAVVPARYAAAPVAAAPVAAAPIAAAPVAAPYYAARYAVAPAYSAPYVTAARYEAAPFVARYAAAPVAAAPVAAAPAPIYARYATAPVAPAPVVAARYAAPSVVAARYAAAGPYAAYTAPFSAAYTAPFSAAYTSYASPVAAAYTTYTATGPVSAAPVAAAYAAPIAATAVPAVASTVRAAPAKLIETTAAGYRYP

Uniprot

NA

ProteinModelPortal

NA

KEGG

100379403 no KO assigned | (RefSeq) CPR68, BmorCPR68; cuticular protein RR-2 motif 68

GO

GO:0042302 GO:0005634 GO:0006348 GO:0016573 GO:0006325 GO:0043565 GO:0016021 GO:0004672 GO:0048384

SignalP

Position: 1 - 25, Likelihood: 0.937804

Length:

316

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

86.05316

Exp number, first 60 AAs:

21.75938

Total prob of N-in:

0.82905

POSSIBLE N-term signal

sequence

inside

1 - 4

TMhelix

5 - 27

outside

28 - 316

Pi

312.970608

Theta

204.888167

Tajima's D

1.640393

CLR

0.016655

CSRT

0.816359182040898

Interpretation

Uncertain

Source	Sequence	Identity	Evalue
27102218	YAAAPVAAAPVAAAPIAAAPVAAPYYAAR	95.24	2e-07
21761556	KEPLVAAAPAVVAEPAVVPAR	100.00	3e-06
21761556	KEPLVAAAPAVVAEPAVVPAR	100.00	3e-06
28556443	NGDLVQGSYSLVEPDGTR	100.00	3e-06
28556443	NGDLVQGSYSLVEPDGTR	100.00	3e-06
28556443	LEEFDPLPQYR	100.00	3e-06
28556443	NGDLVQGSYSLVEPDGTR	100.00	3e-06
28556443	KEPLVAAAPAVVAEPAVVPAR	100.00	3e-06
28556443	KEPLVAAAPAVVAEPAVVPAR	100.00	3e-06
27102218	VVDYAADSINGFNAVVRKEPIVAAAPAVVAEPAVVPAR	100.00	1e-05
27102218	VVDYAADSINGFNAVVR	100.00	2e-05
28467696	RVQEVFFEFPQPEQK	100.00	2e-05
26280517	VVDVADIDKVMSEGIGMR	100.00	7e-05
24093152	VVDVWDGFR	100.00	7e-05
27102218	IIETTAAGYR	100.00	7e-05
28467696	VVDVSTMPFIVR	100.00	7e-05
21761556	NGDLVQGSYSLVEPDGTR	100.00	7e-05
28556443	VVDYAADSINGFNAVVR	100.00	7e-05
28556443	SVVPAAYAAAPLVAAAPAVAAR	100.00	7e-05
28556443	SVVPAAYAAAPLVAAAPAVAAR	100.00	7e-05
28556443	FGYDVADSLTGDYK	100.00	0.004
28556443	FGYDVADSLTGDYK	100.00	0.004
28556443	EPLVAAAPAVVAEPAVVPAR	100.00	0.004
28556443	FGYDVADSLTGDYK	100.00	0.004
28556443	EPLVAAAPAVVAEPAVVPAR	100.00	0.004
28556443	EPLVAAAPAVVAEPAVVPAR	100.00	0.004

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree