Gene

KWMTBOMO03930  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010229

Annotation

PREDICTED:_SAP_domain-containing_ribonucleoprotein_[Papilio_polytes]

Location

Bomo_Chr7(+):6737215-6738239      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.162

CDS

ATGGCGGATTCAACAGTTTCCGATGTGACTAAGATGAAAGTTGTTGAACTACGTAAAGAATTAAAATCACGTGGACTTTCATACGCCGGCGACAAAGCAGAGTTAATCGCTAGACTACAAGCTGCAATTATATCTCAAGATGAACACACCGACATCAACTTTGAATTTGACGAAATGGACTCGGACGGAGTTTTTGAAGACGAAGAAGTTAAAAGCCAAACAGACGTACTTGATGATACTGCCGTGGACACTTTAAACGAAGATTTAGTTCTTTCGGAACAGTCTTCTACTGCGACAATCGCTGTAGAAACAAAATCAACACGAACATTAAAACGCAAAACCAACGCAGAAACCAAAGATAAAAGTGCAGAAAATGCTAGTGCAAAGAAAATTGTGTTGAATAGACCCTCATCAATTTCACTTGTCAGTTCTAAAACTGTTGATGATCAAATTAATGAAAAATCTGTAGAGCCGAAAACGGCATCCGAAAGTAATAATGTCATTAAAATAAATACTGATCTAGATCCAAAGAAAAGGTTAGAGTTGCGTGCTAAAAGATTTGGTTTGCCTATTAAAATGTCCGAGTCTGAGAGAAAGGAAGCCAGGAAACAAAGGTTTAATCAAAATGATAATCAGAACACCTTCACTAGTACAGGGACGTTAAACGAAAATATGGAAAAACTTAGAAAGCGAGCAGAGAGGTTTGGTGAATCTGTTTCCAAAATAATGACAGATATTGAACTAAAGGAGAAATTGGAAAAACGTAAAGCCAAATTTGGTGCTGTTGCATAG

Protein

MADSTVSDVTKMKVVELRKELKSRGLSYAGDKAELIARLQAAIISQDEHTDINFEFDEMDSDGVFEDEEVKSQTDVLDDTAVDTLNEDLVLSEQSSTATIAVETKSTRTLKRKTNAETKDKSAENASAKKIVLNRPSSISLVSSKTVDDQINEKSVEPKTASESNNVIKINTDLDPKKRLELRAKRFGLPIKMSESERKEARKQRFNQNDNQNTFTSTGTLNENMEKLRKRAERFGESVSKIMTDIELKEKLEKRKAKFGAVA

Uniprot

H9JL28   A0A2A4K2P5   A0A2W1BSU4   S4PGI3   A0A212FAJ2   A0A2H1WI39   + More
A0A194PLM0   A0A194QZ25   A0A0L7L882   F4WYI4   E2BP09   A0A151I2G5   A0A026X2M8   E2AAE0   A0A088A896   A0A0J7KWQ2   A0A2A3E8C7   A0A158P1L8   A0A195E2X8   A0A0L7QQN0   A0A310SWH8   E9I8Z3   A0A1E1WMK6   A0A154PK69   A0A0M9A5W4   A0A195F3E7   A0A1L8DAR0   A0A1L8DD92   A0A151X7G8   K7J3Q6   A0A2J7QKH3   A0A1B6MGY2   A0A1B0FUY7   B0WKU1   A0A232EEW3   D6WM78   A0A1B6FK66   V5I7I8   A0A139WH36   A0A0P6D9P0   A0A0P5C9R2   A0A1S4FP17   E9HIX7   Q16UI7   A0A182G661   A0A164TA77   A0A0K8TTP4   A0A0P5YJG4   A0A023EN69   A0A195CSP9   A0A0P6AWL2   A0A2L2XX13   A0A0P4Y3E5   A0A067R4A8   U5EZW7   A0A034WQ87   A0A182VKU2   N6U9C9   A0A1Q3EYB8   U4ULZ2   A0A293LY96   A0A1S3D647   A0A182LCH9   A0A182TRW5   J9HG68   A0A0K8USS3   A0A182HJA9   Q7QBC8   A0A1S3D643   V4ASK9   A0A1B6E8I9   A0A1A9V7W8   A0A0L8HMW8   W8BUW1   A0A2J7QKH6   A0A1A9YCU0   A0A1B0BUH2   A0A1A9ZZZ5   A0A182RIX5   A0A0K8R6V0   D3TRJ9   A0A182M144   B7PP48   A0A182XE13   A0A131Y0Y3   A0A182Q1S8   A0A2M4APL4   A0A182N599   A0A369S7I4   A0A1A9WH26   A0A2R5LGN8   A0A0L0CK63   A0A0T6B4A9   A0A131XRM9   Q9VHC8   A0A131YNP7   A0A182JNU8   A0A2G8LQJ9   A0A224Z0N0   A0A182YM36  

Pubmed

19121390    28756777    23622113    22118469    26354079    26227816    + More
21719571    20798317    24508170    30249741    21347285    21282665    20075255    28648823    18362917    19820115    21292972    17510324    26483478    26369729    24945155    26561354    24845553    25348373    23537049    20966253    12364791    14747013    17210077    23254933    24495485    20353571    30042472    26108605    28049606    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    26830274    29023486    28797301    25244985   

EMBL

BABH01011531    NWSH01000258    PCG77950.1    KZ149930    PZC77411.1    GAIX01003652    + More
JAA88908.1    AGBW02009471    OWR50747.1    ODYU01008814    SOQ52740.1    KQ459600    KPI94222.1    KQ460930    KPJ10788.1    JTDY01002377    KOB71544.1    GL888450    EGI60716.1    GL449511    EFN82601.1    KQ976538    KYM81309.1    KK107024    QOIP01000004    EZA62266.1    RLU24017.1    GL438095    EFN69606.1    LBMM01002506    KMQ94728.1    KZ288325    PBC28023.1    ADTU01006541    KQ979709    KYN19436.1    KQ414786    KOC60935.1    KQ759883    OAD62183.1    GL761667    EFZ22930.1    GDQN01002820    JAT88234.1    KQ434943    KZC12259.1    KQ435747    KOX76499.1    KQ981852    KYN34983.1    GFDF01010627    JAV03457.1    GFDF01009737    JAV04347.1    KQ982450    KYQ56260.1    NEVH01013262    PNF29084.1    GEBQ01028205    GEBQ01004767    JAT11772.1    JAT35210.1    AJWK01006428    DS231976    EDS30064.1    NNAY01005193    OXU16906.1    KQ971343    EFA03345.1    GECZ01019163    JAS50606.1    GALX01006360    JAB62106.1    KYB27273.1    GDIQ01088761    JAN05976.1    GDIP01174191    JAJ49211.1    GL734119    GL732658    EFX61794.1    EFX68313.1    CH477621    EAT38194.1    JXUM01000648    KQ560109    KXJ84473.1    LRGB01001857    KZS10298.1    GDAI01000288    JAI17315.1    GDIP01056965    JAM46750.1    GAPW01002750    JAC10848.1    KQ977305    KYN03670.1    GDIP01023283    JAM80432.1    IAAA01006109    LAA00566.1    GDIP01233254    JAI90147.1    KK852902    KDR14053.1    GANO01000001    JAB59870.1    GAKP01002592    JAC56360.1    APGK01043816    KB741018    ENN75197.1    GFDL01014807    JAV20238.1    KB632357    ERL93493.1    GFWV01007998    MAA32728.1    EJY57842.1    GDHF01022736    JAI29578.1    APCN01002135    AAAB01008879    EAA08487.5    KB201392    ESO96726.1    GEDC01003040    JAS34258.1    KQ417725    KOF90576.1    GAMC01001425    JAC05131.1    PNF29083.1    JXJN01020689    GADI01007027    JAA66781.1    CCAG010022855    EZ424051    ADD20327.1    AXCM01001496    ABJB010285564    ABJB010378053    ABJB010807823    DS755904    EEC08370.1    GEFM01003259    JAP72537.1    AXCN02000148    GGFK01009403    MBW42724.1    NOWV01000048    RDD42790.1    GGLE01004567    MBY08693.1    JRES01000301    KNC32602.1    LJIG01009876    KRT82204.1    GEFH01000235    JAP68346.1    AE014297    AY061392    AAF54386.1    AAL28940.1    GEDV01008362    JAP80195.1    MRZV01000012    PIK62450.1    GFPF01011579    MAA22725.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053268    UP000053240    UP000037510    + More
UP000007755    UP000008237    UP000078540    UP000053097    UP000279307    UP000000311    UP000005203    UP000036403    UP000242457    UP000005205    UP000078492    UP000053825    UP000076502    UP000053105    UP000078541    UP000075809    UP000002358    UP000235965    UP000092461    UP000002320    UP000215335    UP000007266    UP000000305    UP000008820    UP000069940    UP000249989    UP000076858    UP000078542    UP000027135    UP000075903    UP000019118    UP000030742    UP000079169    UP000075882    UP000075902    UP000075840    UP000007062    UP000030746    UP000078200    UP000053454    UP000092443    UP000092460    UP000092445    UP000075900    UP000092444    UP000075883    UP000001555    UP000076407    UP000075886    UP000075884    UP000253843    UP000091820    UP000037069    UP000000803    UP000075881    UP000230750    UP000076408   

PRIDE

H9JL28    Q9VHC8   

Pfam

PF02037   SAP        + More
PF02586   SRAP
PF05934   MCLC

Interpro

IPR003034   SAP_dom        + More
IPR036361   SAP_dom_sf       
IPR003738   SRAP       
IPR036590   SRAP-like       
IPR009231   Chloride_chnl_CLIC-like       
IPR029063   SAM-dependent_MTases       

SUPFAM

SSF68906   SSF68906        + More
SSF143081   SSF143081       
SSF53335   SSF53335       

Gene 3D

1.10.720.30     3.90.1680.10    

ProteinModelPortal

H9JL28   A0A2A4K2P5   A0A2W1BSU4   S4PGI3   A0A212FAJ2   A0A2H1WI39   + More
A0A194PLM0   A0A194QZ25   A0A0L7L882   F4WYI4   E2BP09   A0A151I2G5   A0A026X2M8   E2AAE0   A0A088A896   A0A0J7KWQ2   A0A2A3E8C7   A0A158P1L8   A0A195E2X8   A0A0L7QQN0   A0A310SWH8   E9I8Z3   A0A1E1WMK6   A0A154PK69   A0A0M9A5W4   A0A195F3E7   A0A1L8DAR0   A0A1L8DD92   A0A151X7G8   K7J3Q6   A0A2J7QKH3   A0A1B6MGY2   A0A1B0FUY7   B0WKU1   A0A232EEW3   D6WM78   A0A1B6FK66   V5I7I8   A0A139WH36   A0A0P6D9P0   A0A0P5C9R2   A0A1S4FP17   E9HIX7   Q16UI7   A0A182G661   A0A164TA77   A0A0K8TTP4   A0A0P5YJG4   A0A023EN69   A0A195CSP9   A0A0P6AWL2   A0A2L2XX13   A0A0P4Y3E5   A0A067R4A8   U5EZW7   A0A034WQ87   A0A182VKU2   N6U9C9   A0A1Q3EYB8   U4ULZ2   A0A293LY96   A0A1S3D647   A0A182LCH9   A0A182TRW5   J9HG68   A0A0K8USS3   A0A182HJA9   Q7QBC8   A0A1S3D643   V4ASK9   A0A1B6E8I9   A0A1A9V7W8   A0A0L8HMW8   W8BUW1   A0A2J7QKH6   A0A1A9YCU0   A0A1B0BUH2   A0A1A9ZZZ5   A0A182RIX5   A0A0K8R6V0   D3TRJ9   A0A182M144   B7PP48   A0A182XE13   A0A131Y0Y3   A0A182Q1S8   A0A2M4APL4   A0A182N599   A0A369S7I4   A0A1A9WH26   A0A2R5LGN8   A0A0L0CK63   A0A0T6B4A9   A0A131XRM9   Q9VHC8   A0A131YNP7   A0A182JNU8   A0A2G8LQJ9   A0A224Z0N0   A0A182YM36  

PDB

1ZRJ     E-value=0.0438027,     Score=84

KEGG

101743238    K18732 SAP domain-containing ribonucleoprotein | (RefSeq) SAP domain-containing ribonucleoprotein

GO

GO:0016021   GO:0048190   GO:0035167  

PANTHER

PTHR13604  

Length:

263

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.07996

outside

1  -  263

 

 

Pi

9.616212

Theta

7.795101

Tajima's D

0.640818

CLR

3.501093

CSRT

0.577321133943303

Interpretation

Uncertain