SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03929
Pre Gene Modal
BGIBMGA010149
Annotation
PREDICTED:_uncharacterized_protein_LOC101742851_isoform_X2_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.314
 

Sequence

CDS
ATGGACGGTGCAATCAATAATGATGATCAAGATCAAATTGTGGAGCAACTTCTTAGTGAATACGACGAAATAATTATGCCTCTGCCGGCGTATGCGTCTGAACCTCACCTTCTAATTTCTCGGGTCCGCAAATCTTATATGGATTATATGGTGCAACTCTTAAAAGTTAACTATGAAACAAGCCACCGAATTCAACACCAAAAACTCCATTTTCCCAGTGCTATTTGGAGATGTGCTAAAAACATAGAAATGAAAGCAGCACAAAAATGTATGATTGTACAAATTTATAGAAAATATATTGGATCTGTGGTTCAGGAATTAAAAAAAGATACAAAGAATAAAAAGATTAATAAAAAATTATATGAATACCTAAATAAGCATCCAGAAAATGATAAAAAAGTTCAAACAACATTTATCAATCAAAATGCTTGTACTTGTCCATGTGTTTGTATGAAACTTAAGAGAAGACGTAAAAATGATACTCAAAGTACACCTGAGAGTAACAAGCGACATATAACACCATTGAATGATCAATATAAAATACCGGTTGTCATTAATATGCATCCAGAGGCTCAAAATCCAGTAATTACCAAAGATATTCATGCTATGGAAACAATACCACAATCTGACATTATATCTAAACCGGACAGTATTTCACCAAAACTTAATATGCCAAAGCCAGTTGATGATCTTGACACACATGATGAGTTAATGATGCAACTGGAAAAACTGTTTCATGGGAATAAAAATGATGAAGATTTATTCGAAACAACTCTCTGCAACATGCCTACTGATGGTAACTTATTTGAAGATTACACAGTAAATAATGATGCTAGCAATGTAAATACATCAGTTATTGAAAATCATGCAAAACAAATAAAGTCACTAGATGAAAAGCTGGCATCATTAGCAGACATGCTTGTTAATAACACCAAAGATAATTCTGCACGTGAAGACCAAAAACTGCAACAACCAAAAGCACAAACACTACAACATAAGAAGCAAAATCCAAGCAAGTGGTTATGTGAAGAATATTTTTTAAAAGTGAAATTATTTGAAATACTTGATCTTATTGGAGATTCAAATAGAAAAAAATTAGCAAGGATCAAAGAATTGTTTGCTGATTTATTTGGACCAGACAGTGATGATGAAAGCATACTATCGCCATTAGAAGAAACCCCTGAGTTTGTTCTGAGTTGTAAAGAAAGAATTGCTCCCTGGGTTGTTAAAATACTTACTCCTGTATACACAAAAGGTCATATTAAAGGGAAAGCACTGTTCAAAGCATTAGCGAAACATCTAATTAATTTGATTTATCAGTGCAGCCACTATCCAGAGGAGTATGAAGTGAAAAGTTTTGTTTGTGACTTCTTGAAAAGTCACAGAGTGATAAGATGTGAGGCAGATTTCCACCAATTTAGAATAGAGAATCTTTAA
Protein
MDGAINNDDQDQIVEQLLSEYDEIIMPLPAYASEPHLLISRVRKSYMDYMVQLLKVNYETSHRIQHQKLHFPSAIWRCAKNIEMKAAQKCMIVQIYRKYIGSVVQELKKDTKNKKINKKLYEYLNKHPENDKKVQTTFINQNACTCPCVCMKLKRRRKNDTQSTPESNKRHITPLNDQYKIPVVINMHPEAQNPVITKDIHAMETIPQSDIISKPDSISPKLNMPKPVDDLDTHDELMMQLEKLFHGNKNDEDLFETTLCNMPTDGNLFEDYTVNNDASNVNTSVIENHAKQIKSLDEKLASLADMLVNNTKDNSAREDQKLQQPKAQTLQHKKQNPSKWLCEEYFLKVKLFEILDLIGDSNRKKLARIKELFADLFGPDSDDESILSPLEETPEFVLSCKERIAPWVVKILTPVYTKGHIKGKALFKALAKHLINLIYQCSHYPEEYEVKSFVCDFLKSHRVIRCEADFHQFRIENL

Summary

Pfam
PF11176   Tma16        + More
PF00561   Abhydrolase_1
Interpro
IPR029058   AB_hydrolase        + More
IPR021346   Tma16       
IPR038356   Tma16_sf       
IPR000073   AB_hydrolase_1       
SUPFAM
SSF53474   SSF53474       
Gene 3D

Ontologies

GO

Topology

Length:
478
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00152
Exp number, first 60 AAs:
0.00094
Total prob of N-in:
0.00635
outside
1  -  478
 
 

Population Genetic Test Statistics

Pi
265.983864
Theta
207.497546
Tajima's D
0.746459
CLR
0.187851
CSRT
0.585070746462677
Interpretation
Uncertain
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