Silkworm Genome Informatics Database

Gene

KWMTBOMO03927 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010227

Annotation

PREDICTED:_scaffold_attachment_factor_B1-like_isoform_X1_[Papilio_xuthus]

Location

Bomo_Chr7(+):6711545-6722742 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.627

CDS

ATGTCGGACAAAAAGCGTTTACTGAACGATCTTAGAGTAATAGACTTGCGTGCCGAATTAGAGAAACGTAACCTAGACAAGAGCGGTGTTCGTGGTGTTCTGATACAACGCCTGTCGAAGTATTTGGAAGAGGAGGGACATGATCCGACCACTTTTAAATTTGAATTGACGACCTCTGACGCAAAGACACCTTCAAAGCGAACAAGGCGAACGGAAAGCTCCCTAGAGCAGGAAAGCGACGAGACGCCGCTTATGGAAGATATGATCGTACAGGACGACGCTGGGGAAGAAGAAGAAATTGAACAGAACATTAAACAAAAATCAAGTGACGAACCTAACAGCAAATCCAATATGGAAGTTGACGAAAGTGATAAAAATAGTAGAAAAAGAGAATTAAAGGATGATCAAGAAACCACCCCGGCTAAAAAACCCTGTATTCATAAAGAAAAGAATGATGAAGACCATAAAGAAAACACAGATGCAGATGATAGTATCAACTTAGATATTGGAGATGACGAATTACTTAATGAGGAGACTGACACCAACACCAAAAGTAATAAAAAAGATGATGGTGAGAACGAGGACAACACGGGGACGACCAACGAGAATACCACACAGGACACTGCTGCTGCTGGCTGCGATTCCATCTCAACGGAGGATCATCAAGTTAATGCAGAAACTTCAGCCATTAGCAACGAGGATGACAAACATGATAATCAACAGAAAGATGAGAAGGAAAAAGACAATGAAGGTGACAAAAAGGAAAAGAAAGATGAAAGTAAAGAGAGTGGTGCTCGTAATCTCTGGATAAGTGGATTATCAGGGGACACTCGTGCCAAAGACCTGAAGCAACTCTGCAGTAAACATGGAAAAGTAATTGGAGCGAAAGTAGTAACAACAGCGAGATGGCCTGGATCACGTTGTTTTGGATATGTTACCGTGGCTACAGCACAAGATGCGGAAAACTGCATCAAAAATTTGCACAGAACAGAGCTACATGGTCGCATGATTTCTGTTGAGAAGGCTAAATCGGAATCTGAGTCGTCATCCCGTAGACAACCAGTGGTGCGGCCTGAACGACGGCCAAGTAAGGACAAGAAGGAGGAAAGTAAAGAAAATGAGGAAGTAAAAGACGAAAATAAAGATATCAAAATTAAAAAGGAAGGGGATGTGTCTGCTTCTGAGAGCAATCGCTCTACATCTCGCACACGAGAAAAGTCTCATCGCTCTGATAGGGAAAAGCCTAAAAGGAGCACTAAAAGTAATGAGCGAAGACGATCCCCTAGAGAAGTGCTGTCATTTTCAAAAATATGGAAAGAGCGTGACGTCGCCCGGGCCCGCGAGCGGTCCCGCGCCGCCCGCGAGGAGGAGCGCCGCCGTCGCGCCGCCGAGGAAGCCTTGCGGGAACGCGAGCGCCGACAGCGACAGGAGAAACATCGTCTCGCGCTCGAGAGAGAGAAACTCCGTGCTGAACGTGAAAAAATTGAACGTGAGAAAAATGAACTGCTGAGATTAGAGCGTGAGCGACATAGATTGGAACGTGAGAAACTTGAGCTTGAGAGGTTGGAACTGAAAAGAGCACAACTCAGATTAGAGGAAGAACGTCGTAAGCGCGGGTACGAGAGTACCAGCGGCGGAGGGTCTGGAGGTGGTGGGTACCGCGGGGGTGTAGAGCCGGCCTACGAGCGCGAGCGACACAAGCGGGCCGCTCCGCCCCCGCCCCCGCCGCCCCGCGCCCACTTTGACGCACCCCCTCCACCGCGCTTCGACACCGCGCCGCGCGACCGTGACCGCGACTACAAGCGCGACTACCCGCGACACGTCTCCTCGAGTGCAATTAAATACTCGAGCAACGGAAGCACTAACGATGACGCGAGGCAACCAATACCGCCTGGAACTAGACCGAAGGAACCTGGCCGTTCGTATGACTCCCGTGAAAGTCGTTCATACCGCCCGTCGCCGCCAGCCAAGCCAGAGGTTCGCTGGAACACTGCGCCGCGATATACTGATTCGGCACCCCCCACCAAAGGATTTAACAAAAGTTGA

Protein

MSDKKRLLNDLRVIDLRAELEKRNLDKSGVRGVLIQRLSKYLEEEGHDPTTFKFELTTSDAKTPSKRTRRTESSLEQESDETPLMEDMIVQDDAGEEEEIEQNIKQKSSDEPNSKSNMEVDESDKNSRKRELKDDQETTPAKKPCIHKEKNDEDHKENTDADDSINLDIGDDELLNEETDTNTKSNKKDDGENEDNTGTTNENTTQDTAAAGCDSISTEDHQVNAETSAISNEDDKHDNQQKDEKEKDNEGDKKEKKDESKESGARNLWISGLSGDTRAKDLKQLCSKHGKVIGAKVVTTARWPGSRCFGYVTVATAQDAENCIKNLHRTELHGRMISVEKAKSESESSSRRQPVVRPERRPSKDKKEESKENEEVKDENKDIKIKKEGDVSASESNRSTSRTREKSHRSDREKPKRSTKSNERRRSPREVLSFSKIWKERDVARARERSRAAREEERRRRAAEEALRERERRQRQEKHRLALEREKLRAEREKIEREKNELLRLERERHRLEREKLELERLELKRAQLRLEEERRKRGYESTSGGGSGGGGYRGGVEPAYERERHKRAAPPPPPPPRAHFDAPPPPRFDTAPRDRDRDYKRDYPRHVSSSAIKYSSNGSTNDDARQPIPPGTRPKEPGRSYDSRESRSYRPSPPAKPEVRWNTAPRYTDSAPPTKGFNKS

Uniprot

NA

ProteinModelPortal

NA

PDB

2FY1 E-value=0.00066452, Score=104

KEGG

101742702 no KO assigned | (RefSeq) scaffold attachment factor B2-like

GO

GO:0000166 GO:0003676 GO:0016020 GO:0006355 GO:0008270 GO:0043565 GO:0016021 GO:0004672 GO:0048384

Length:

681

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00056

outside

1 - 681

Pi

265.125566

Theta

196.083608

Tajima's D

0.999979

CLR

0.266986

CSRT

0.664216789160542

Interpretation

Uncertain

Source	Sequence	Identity	Evalue
26822097	GYESTSGGGSGGGGYR	100.00	4e-07
26280517	CEVDIGDIVEAFQTK	100.00	4e-07
28467696	CFGGQCINPCQIEK	100.00	4e-07

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics