SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03922
Pre Gene Modal
BGIBMGA010152
Annotation
PREDICTED:_uncharacterized_protein_LOC105842361_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 2.479
 

Sequence

CDS
ATGTGTTCTACAATGTGGTTTGTATGTGCTATCATATTTGTGGTCGCGGACATCAGAACGGGAGCCCTTCAACAGCACGGAATGAAGCCCCAGCAATGTCATCAATGTACCGCGAGCAACACAACGAGCTGCGAGCTACACACTGATTGGACAAACATCGTATGCCCAAACGACCGACCGCATTGTGGGACCATCGCTACGGGACCACGATTTGCGTCTTCATTAACCTGTTCAGCAACTAATAACACATCGTGCTCGTTAGTATATTCCACTGGAACTACACTTGAGCTAACCTGTACATGCCTGGAGAAATTTTGCAACCTTCCATTTGCACCGAAACTACAGACTGAACTACTCAATTTTTCATCTAAGTACAACGACAGCGAGAATCTTACGGAAACTTTCTTCAAAAGGTCGATATTTGCTAACTCGACTGACTTAAGTCTTTATAAAGAGATAACGAGTGAACTGGAAGAAGCTACTGAATTGCCAATGAGGAATAGTTCACAGCATACCACGTTTTCAATGACGACTACTACTTTGGTGATCGAAAATGTTTCAAAACATCCGGAAGTTATGCCTCATCCTATTGCACTCAAGCAAAATCCGTCAGTTCCATCTGACGATGACGAAGACGAAAGTGAAGGAAGTGGTTCATATGAAGAACCTAGATCACGCAACCATGCATCTTCCGTACCTGCAGCACCTAGTTCCTTCCTACCCGCGAATGAAAGCAACGCTGCGTCTTTACCTAAAGTCTCCTGTTCTATTTTGCTGTTAGTTATAAATATGGTACTGTAG
Protein
MCSTMWFVCAIIFVVADIRTGALQQHGMKPQQCHQCTASNTTSCELHTDWTNIVCPNDRPHCGTIATGPRFASSLTCSATNNTSCSLVYSTGTTLELTCTCLEKFCNLPFAPKLQTELLNFSSKYNDSENLTETFFKRSIFANSTDLSLYKEITSELEEATELPMRNSSQHTTFSMTTTTLVIENVSKHPEVMPHPIALKQNPSVPSDDDEDESEGSGSYEEPRSRNHASSVPAAPSSFLPANESNAASLPKVSCSILLLVINMVL

Summary

Pfam
PF09754   PAC2
Interpro
IPR038389   PSMG2_sf        + More
IPR019151   Proteasome_assmbl_chaperone_2       
IPR016562   Proteasome_assmbl_chp_2_euk       
Gene 3D

Ontologies

Topology

SignalP
Position:   1 - 22,         Likelihood:  0.997267
 
 
Length:
266
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
6.46566
Exp number, first 60 AAs:
6.4299
Total prob of N-in:
0.21461
outside
1  -  266
 
 

Population Genetic Test Statistics

Pi
180.348663
Theta
163.802526
Tajima's D
0.238387
CLR
0.753219
CSRT
0.43592820358982
Interpretation
Uncertain
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