Gene

KWMTBOMO03920

Pre Gene Modal

BGIBMGA010224

Annotation

PREDICTED:_coiled-coil_domain-containing_protein_174_[Bombyx_mori]

Location

Bomo_Chr7(+):6552845-6562793      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.585

CDS

ATGGAAGATCAAGGAGCTAAGAAAATTTTATTTAACAAATCAATGCTATTTAGCCTGAAAGCTGAGCTACTGAGGAAACAAGAAGAGGTTCTTGTGAAGAAGCAAATGCCTCAGCATAAAGCTGAAAATTTCAAACCACCTCCAGTAAAAACTGACAAATCAGAAAAATCAGATAAAAAATCTTTTAAAGAAAACTTGAAAGCTGTCGACGTTGAGGAGTTACAAGCAAGTAGAAAATCAAAGTTGGCATTGGAGAAAAAAGCTGAGCTTTATGAACATTTAACAGACAATGCTGGCAATTCGCAGCTAGCAGGAAGATTCTTGGTAGATTTCAGTACAAAAAAACAGCAGCAACAAGAATTTACTAAGACTATCGTAGAAAATAAATCTGGAGATGAACAAGTTGTGGCAAATGACAATGATGACAAAGATGAGAATGAGTGGGTCGAGTTTACAGATTGTCTCGGTAGAACTAGAAAATGTCATAAATCGGACCTCGAAATGTTTACGACGCGGGATAAAGCACTTAGGAGAACTATGGGTATTGACACAAGCACTGAAGACCATTCCACCAATGAGGATACAAATCAGTCAACAGAGAAACCGTATTTGGTACAGAAGACTAATGATTACCTTCAATCGCTTCGAAGAAAATGGGAAGAGAAAGAAAAGGATCTTCTTCAGAAAGACAAAGACATCCATTATCAGGATTTGTTGTTTGATGAGGCAAGAATACACGGCGTCGGTTATTACTCGTTCAGTACTGATGAGACTGAGCGTCGTAAACAGATGGAAGAGTTGACGAAACGTCGCCAGGACACGTTGAAGAAACAAGAAGAAGCTGAGGAAATGAGGAAAAAGCGTGACGAGCTGATGGCTGCCAGGGTCGCCGCCGCCAGGGCCAGGCAGCGAGCGCGCGCTGGTCTGCCGCCCGAACCGCCACAAGAAAACCAAAAGGATTTCTCCGCTTGTCTTCTTGAATTGCTAACGCGGCAAAGGAATGAAGTAGAAGAAAAAGCTAAAGCCGAGGAAAATAAAATAAAAGAAGAACAAGAAAAAGAAAGGCAAAAGCTAAGGGAAGCTTACATTCGTGAGTGGGACTTGGGAAAGGAAGGTGTCGAAGATAAAGTCAAGAAGTTTCGCGAAATGACTCAAGAAGAATATGTTGAACAGCAAAGGAACAAGAGAATAAATGAATTCGCTCCGCCTCAGATATCTGAGAAGAAATCAAGTTTTGTTTTCGATAGTAAAGGACGAAAAGTTAATTCAGAAGAACCAGCTACGCAAAATAAAACTTGGTCTGACGTGAGACCTAAAATTAATACACCGCCTCCACCTCATATTGGGGAAATAAGTTTGGATGAATCGTCATCTCAAACATTTATAGAGGAAAGCAATTCAATGAAACGAAAAGGCTTATATTTCTCAAGTAAAGAAACAAGATTCAATTACAGGAACTTCGTTCCGCAGCAAGATCTAACGCCTATAGTTAACGAATTAAGTGATGATGAATCAAACAATGCCTTAGAGACCAAAAATACAGGAAATGTCCCAAGCCATTCTGAAATAGCTCCTCCTGCTACATATGAGTATTATGGACCCGTTAATAAAAAGCGAATTATCGAGAGACCATTTAAATCGGACATTAGAGAAGCATACGCCCAGGGAAGTAAATATTTAGAAGCGTCTAATAGTAACCGAGAGTCGAATATACCTAAACAGTACGATTTTATGTTTAACTAA

Protein

MEDQGAKKILFNKSMLFSLKAELLRKQEEVLVKKQMPQHKAENFKPPPVKTDKSEKSDKKSFKENLKAVDVEELQASRKSKLALEKKAELYEHLTDNAGNSQLAGRFLVDFSTKKQQQQEFTKTIVENKSGDEQVVANDNDDKDENEWVEFTDCLGRTRKCHKSDLEMFTTRDKALRRTMGIDTSTEDHSTNEDTNQSTEKPYLVQKTNDYLQSLRRKWEEKEKDLLQKDKDIHYQDLLFDEARIHGVGYYSFSTDETERRKQMEELTKRRQDTLKKQEEAEEMRKKRDELMAARVAAARARQRARAGLPPEPPQENQKDFSACLLELLTRQRNEVEEKAKAEENKIKEEQEKERQKLREAYIREWDLGKEGVEDKVKKFREMTQEEYVEQQRNKRINEFAPPQISEKKSSFVFDSKGRKVNSEEPATQNKTWSDVRPKINTPPPPHIGEISLDESSSQTFIEESNSMKRKGLYFSSKETRFNYRNFVPQQDLTPIVNELSDDESNNALETKNTGNVPSHSEIAPPATYEYYGPVNKKRIIERPFKSDIREAYAQGSKYLEASNSNRESNIPKQYDFMFN

Uniprot

H9JL23   A0A2H1WER2   A0A2A4JSS3   A0A2W1BPC0   A0A194QZB8   A0A0L7KMC6   + More
A0A194PLC5   A0A1E1W5J2   A0A1Y9IVJ3   A0A1W4X6V4   A0A069DUL4   A0A0V0G9P5   A0A224XM43   A0A1Y1MAG5   A0A0A9XL27   A0A084W040   A0A0T6B034   A0A0K8TCU3   A0A336MUI9   A0A146L5X6   A0A182QQI5   A0A182V4R4   F5HMV7   A0A182YHY1   A0A1Y9J098   A0A182L8L5   A0A2M4CRX5   E9J583   A0A151WMF2   Q7PX62   A0A195E5S9   A0A2K6VB23   A0A2M4CS00   A0A336MPH8   A0A2S2R4V3   A0A1A9WJM7   A0A182IP51   A0A0J7NW14   A0A158NR54   E2ADS9   A0A195EUE9   A0A195B0Y2   A0A164UY72   A0A0N8A964   A0A0P5KML5   A0A0P5SSU2   A0A0P5AA06   A0A088A4Q1   A0A1W4UM08   A0A2M4BGU9   A0A2M4BGV3   E2BN32   A0A1Q3FUV4   A0A1A9YK67   A0A3Q0J263   A0A1B0BBY0   J9KMD7   A0A1S4G0Y9   B4NB42   A0A1A9UNB3   A0A1B0G6U3   B3NZ97   B4KCC2   A0A1J1IN39   A0A1B0AAD4   B4LZ76   B4GLM1   A0A026WI56   A0A3L8DXD5   B4JUH6   A0A3L8DAG4  

Pubmed

19121390    28756777    26354079    26227816    26334808    28004739    + More
25401762    24438588    26823975    12364791    14747013    17210077    25244985    20966253    21282665    20920257    21347285    20798317    17510324    17994087    24508170    30249741   

EMBL

BABH01011505    BABH01011506    BABH01011507    BABH01011508    BABH01011509    ODYU01008168    + More
SOQ51541.1    NWSH01000744    PCG74450.1    KZ149942    PZC76892.1    KQ460930    KPJ10802.1    JTDY01008657    KOB64457.1    KQ459600    KPI94236.1    GDQN01008845    JAT82209.1    GBGD01001388    JAC87501.1    GECL01002029    JAP04095.1    GFTR01006916    JAW09510.1    GEZM01036456    JAV82684.1    GBHO01022980    JAG20624.1    ATLV01019085    KE525262    KFB43584.1    LJIG01016371    KRT80803.1    GBRD01002443    JAG63378.1    UFQT01001247    SSX29628.1    GDHC01016539    JAQ02090.1    AXCN02001502    AAAB01008987    EGK97629.1    GGFL01003918    MBW68096.1    GL768124    EFZ12022.1    KQ982944    KYQ48981.1    EAA01791.5    KQ979608    KYN20441.1    GGFL01003919    MBW68097.1    UFQT01001461    SSX30663.1    GGMS01015791    MBY84994.1    LBMM01001295    KMQ96560.1    ADTU01023710    GL438820    EFN68441.1    KQ981965    KYN31873.1    KQ976691    KYM77950.1    LRGB01001569    KZS11786.1    GDIP01170225    JAJ53177.1    GDIQ01189457    JAK62268.1    GDIP01135784    JAL67930.1    GDIP01205422    JAJ17980.1    GGFJ01003144    MBW52285.1    GGFJ01003145    MBW52286.1    GL449382    EFN82936.1    GFDL01003698    JAV31347.1    JXJN01011741    ABLF02026859    ABLF02026860    CH964232    EDW81006.1    CCAG010013873    CH954181    EDV48639.1    CH933806    EDW13731.1    CVRI01000056    CRL01647.1    CH940650    EDW67083.1    CH479185    EDW38445.1    KK107189    EZA55732.1    QOIP01000003    RLU24599.1    CH916374    EDV91146.1    QOIP01000010    RLU17326.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000037510    UP000053268    UP000075920    + More
UP000192223    UP000030765    UP000075886    UP000075903    UP000007062    UP000076408    UP000076407    UP000075882    UP000075809    UP000078492    UP000091820    UP000075880    UP000036403    UP000005205    UP000000311    UP000078541    UP000078540    UP000076858    UP000005203    UP000192221    UP000008237    UP000092443    UP000079169    UP000092460    UP000007819    UP000007798    UP000078200    UP000092444    UP000008711    UP000009192    UP000183832    UP000092445    UP000008792    UP000008744    UP000053097    UP000279307    UP000001070   

PRIDE

H9JL23   

Pfam

PF13300   DUF4078        + More
PF04910   Tcf25
PF03031   NIF
PF09032   Siah-Interact_N
PF04969   CS

Interpro

IPR025066   DUF4078        + More
IPR011990   TPR-like_helical_dom_sf       
IPR006994   TCF25/Rqc1       
IPR035940   CAP_sf       
IPR015120   Siah-Interact_N       
IPR011948   Dullard_phosphatase       
IPR008978   HSP20-like_chaperone       
IPR023214   HAD_sf       
IPR036412   HAD-like_sf       
IPR040078   RNA_Pol_CTD_Phosphatase       
IPR007052   CS_dom       
IPR037893   CS_CacyBP       
IPR004274   FCP1_dom       

SUPFAM

SSF48452   SSF48452        + More
SSF49764   SSF49764       
SSF56784   SSF56784       

Gene 3D

1.25.40.10     3.40.33.10     2.60.40.790     3.40.50.1000    

CDD

cd06468  p23_CacyBP

ProteinModelPortal

H9JL23   A0A2H1WER2   A0A2A4JSS3   A0A2W1BPC0   A0A194QZB8   A0A0L7KMC6   + More
A0A194PLC5   A0A1E1W5J2   A0A1Y9IVJ3   A0A1W4X6V4   A0A069DUL4   A0A0V0G9P5   A0A224XM43   A0A1Y1MAG5   A0A0A9XL27   A0A084W040   A0A0T6B034   A0A0K8TCU3   A0A336MUI9   A0A146L5X6   A0A182QQI5   A0A182V4R4   F5HMV7   A0A182YHY1   A0A1Y9J098   A0A182L8L5   A0A2M4CRX5   E9J583   A0A151WMF2   Q7PX62   A0A195E5S9   A0A2K6VB23   A0A2M4CS00   A0A336MPH8   A0A2S2R4V3   A0A1A9WJM7   A0A182IP51   A0A0J7NW14   A0A158NR54   E2ADS9   A0A195EUE9   A0A195B0Y2   A0A164UY72   A0A0N8A964   A0A0P5KML5   A0A0P5SSU2   A0A0P5AA06   A0A088A4Q1   A0A1W4UM08   A0A2M4BGU9   A0A2M4BGV3   E2BN32   A0A1Q3FUV4   A0A1A9YK67   A0A3Q0J263   A0A1B0BBY0   J9KMD7   A0A1S4G0Y9   B4NB42   A0A1A9UNB3   A0A1B0G6U3   B3NZ97   B4KCC2   A0A1J1IN39   A0A1B0AAD4   B4LZ76   B4GLM1   A0A026WI56   A0A3L8DXD5   B4JUH6   A0A3L8DAG4  

KEGG

101742517    no KO assigned | (RefSeq) coiled-coil domain-containing protein 174

GO

GO:0003743   GO:0006357   GO:0044548   GO:0031625   GO:0015631   GO:0008420  

PANTHER

PTHR22684  

Length:

580

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00135

outside

1  -  580

 

 

Pi

21.829406

Theta

172.363315

Tajima's D

0.259791

CLR

1.406023

CSRT

0.446577671116444

Interpretation

Uncertain