Gene

KWMTBOMO03918  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010223

Annotation

Cappuccino-like_protein_[Operophtera_brumata]

Location

Bomo_Chr7(+):6547215-6548154      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.888

CDS

ATGTTGGAGGATATAGCAATTGATTATTCAACATATTTCAAAGTGGACGTGTTGGAAGGATTTAAAACAGTTCAAGATGTTGTTGACAACATGTTAACGAGGCTGGAGGAATTGACGAGTGTTCTTCAAATGGTTAAATTAAAGAACGGCGATTGCTGCAATATTGTGACTGAAGATATAATAAAATATCGTAGAGAGATAAATGTGCTAGGGAAAAGGATTTCGACCCTGTCCAATGTATTAATGTTTTTATCAAATAATGTTGATACAGTTGAAAAACAAGTAGAGAGAGCTGAAGGTTTTTTTGGAGTACAAAATGATAACAAATTAAAAAGTCTTCTCAAGCCATTCATAAAAAGAGGTAGGGAGACAATACCTGACAATAGTTTGCCTCCTCATCATAAAATAGATTTGAGTAGTGTAATGGACAATTTTCAAAGCATGTAA

Protein

MLEDIAIDYSTYFKVDVLEGFKTVQDVVDNMLTRLEELTSVLQMVKLKNGDCCNIVTEDIIKYRREINVLGKRISTLSNVLMFLSNNVDTVEKQVERAEGFFGVQNDNKLKSLLKPFIKRGRETIPDNSLPPHHKIDLSSVMDNFQSM

Uniprot

H9JL22   A0A2H1WGF7   A0A2A4JRL7   A0A1E1WM05   A0A0L7L3F0   I4DL96   + More
A0A194R0N1   A0A3S2TRR4   A0A212EJM1   S4PSP6   A0A2S2Q625   A0A0L7QMW0   A0A2H8TLR0   A0A067RKL7   A0A154P658   A0A2S2NTV5   A0A3L8DG94   V9IIB7   A0A2A3EM35   C4WUN7   A0A088APM7   A0A0C9S1H8   A0A2R5LH48   V5I461   A0A087SX20   A0A1E1X0I8   A0A232FIB1   A0A131XQR0   A0A1S3DAP5   A0A131Z0P0   A0A224YTC3   A0A1A9V4H0   K7JL88   A0A195BWS6   A0A164XWD8   A0A0L0CQM3   W5JCP9   A0A195FLM8   A0A1B6CEJ8   E9GD61   D3TPQ4   E9ID64   A0A1B6HG71   F4WVE3   A0A2P6L5P6   A0A1A9ZTN7   A0A1A9XQK9   A0A1B0BS89   A0A0P5P657   A0A026WUB2   A0A2M4C0R0   A0A0P5F903   A0A195CR75   A0A1B6LIP9   A0A2M4C0Q1   A0A3P8WLV4   A0A2I4B0R2   A0A3P8WMN4   A0A0T6BCW5   A0A1A7YJW4   A0A2I4B0T8   A0A2M4AXT0   A0A2M4AXD6   A0A1B6F0L4   A0A3S3NF24   A0A3Q3A0Z4   A0A1A8QNL6   A0A1A8LYT0   A0A1A7ZHF3   A0A1A8I6M3   A0A1A8CWA1   A0A1A8H5K3   A0A151XIX2   A0A210QXV0   A0A1W4XRR7   A0A2M4C0V3   A0A3P9KC96   A0A0K8TPX6   H2MD14   A0A3P9I240   A0A3P9I2E0   A0A3B3C3S9   A0A3S2P8C2   A0A3R7M8A0   A0A3B4BFA5   A0A1Y1L1Q2   A0A3Q3IRC5   A0A3P8ST37   A0A182HA20   A0A0S7H7X2   A0A3Q2DJQ8   E2AYW2   A0A3Q3XEK9   A0A3Q3GQC5  

Pubmed

19121390    26227816    22651552    26354079    22118469    23622113    + More
24845553    30249741    26131772    25765539    28503490    28648823    28049606    26830274    28797301    20075255    26108605    20920257    23761445    21292972    20353571    21282665    21719571    24508170    24487278    28812685    17554307    26369729    29451363    25463417    28004739    26483478    20798317   

EMBL

BABH01011504    ODYU01008168    SOQ51544.1    NWSH01000744    PCG74459.1    GDQN01010794    + More
GDQN01003163    JAT80260.1    JAT87891.1    JTDY01003207    KOB69945.1    AK402064    KQ459600    BAM18686.1    KPI94239.1    KQ460930    KPJ10805.1    RSAL01000013    RVE53347.1    AGBW02014441    OWR41674.1    GAIX01013423    JAA79137.1    GGMS01003985    MBY73188.1    KQ414868    KOC59958.1    GFXV01003135    MBW14940.1    KK852458    KDR23558.1    KQ434814    KZC06834.1    GGMR01007966    MBY20585.1    QOIP01000008    RLU19434.1    JR045758    AEY60049.1    KZ288219    PBC32342.1    ABLF02026950    ABLF02026953    AK341150    BAH71607.1    GBZX01002061    JAG90679.1    GGLE01004673    MBY08799.1    GANP01001545    JAB82923.1    KK112342    KFM57409.1    GFAC01006421    JAT92767.1    NNAY01000155    OXU30494.1    GEFH01000066    JAP68515.1    GEDV01003564    JAP84993.1    GFPF01006367    MAA17513.1    KQ976401    KYM92423.1    LRGB01000944    KZS14625.1    JRES01000052    KNC34546.1    ADMH02001883    ETN60655.1    KQ981490    KYN41162.1    GEDC01025558    GEDC01023991    GEDC01009801    JAS11740.1    JAS13307.1    JAS27497.1    GL732539    EFX82679.1    CCAG010001205    EZ423406    ADD19682.1    GL762454    EFZ21374.1    GECU01033979    JAS73727.1    GL888387    EGI61764.1    MWRG01001621    PRD33901.1    JXJN01019584    GDIQ01134900    JAL16826.1    KK107109    EZA59251.1    GGFJ01009749    MBW58890.1    GDIQ01258481    JAJ93243.1    KQ977444    KYN02614.1    GEBQ01016421    JAT23556.1    GGFJ01009755    MBW58896.1    LJIG01001805    KRT85135.1    HADW01002846    HADX01007983    SBP30215.1    GGFK01012201    MBW45522.1    GGFK01012136    MBW45457.1    GECZ01026044    JAS43725.1    NCKU01009301    RWS01372.1    HAEH01000359    HAEI01005752    SBR94694.1    HAEF01009923    HAEG01014873    SBR49426.1    HADY01003261    HAEJ01005444    SBP41746.1    HAED01006500    HAEE01007868    SBQ92546.1    HADZ01020078    HAEA01007385    SBP84019.1    HAEB01010101    HAEC01010303    SBQ78519.1    KQ982080    KYQ60352.1    NEDP02001335    OWF53542.1    GGFJ01009815    MBW58956.1    GDAI01001420    JAI16183.1    CM012447    RVE67030.1    QCYY01002517    ROT69796.1    GEZM01066968    GEZM01066967    GEZM01066966    JAV67612.1    JXUM01121934    KQ566552    KXJ70038.1    GBYX01444172    JAO37244.1    GL444010    EFN61378.1   

Proteomes

UP000005204    UP000218220    UP000037510    UP000053268    UP000053240    UP000283053    + More
UP000007151    UP000053825    UP000027135    UP000076502    UP000279307    UP000242457    UP000007819    UP000005203    UP000054359    UP000215335    UP000079169    UP000078200    UP000002358    UP000078540    UP000076858    UP000037069    UP000000673    UP000078541    UP000000305    UP000092444    UP000007755    UP000092445    UP000092443    UP000092460    UP000053097    UP000078542    UP000265120    UP000192220    UP000285301    UP000264800    UP000075809    UP000242188    UP000192223    UP000265180    UP000001038    UP000265200    UP000261560    UP000283509    UP000261520    UP000261600    UP000265080    UP000069940    UP000249989    UP000265020    UP000000311    UP000261620    UP000261660   

PRIDE

H9JL22   

Interpro

IPR024857   Cappuccino       

ProteinModelPortal

H9JL22   A0A2H1WGF7   A0A2A4JRL7   A0A1E1WM05   A0A0L7L3F0   I4DL96   + More
A0A194R0N1   A0A3S2TRR4   A0A212EJM1   S4PSP6   A0A2S2Q625   A0A0L7QMW0   A0A2H8TLR0   A0A067RKL7   A0A154P658   A0A2S2NTV5   A0A3L8DG94   V9IIB7   A0A2A3EM35   C4WUN7   A0A088APM7   A0A0C9S1H8   A0A2R5LH48   V5I461   A0A087SX20   A0A1E1X0I8   A0A232FIB1   A0A131XQR0   A0A1S3DAP5   A0A131Z0P0   A0A224YTC3   A0A1A9V4H0   K7JL88   A0A195BWS6   A0A164XWD8   A0A0L0CQM3   W5JCP9   A0A195FLM8   A0A1B6CEJ8   E9GD61   D3TPQ4   E9ID64   A0A1B6HG71   F4WVE3   A0A2P6L5P6   A0A1A9ZTN7   A0A1A9XQK9   A0A1B0BS89   A0A0P5P657   A0A026WUB2   A0A2M4C0R0   A0A0P5F903   A0A195CR75   A0A1B6LIP9   A0A2M4C0Q1   A0A3P8WLV4   A0A2I4B0R2   A0A3P8WMN4   A0A0T6BCW5   A0A1A7YJW4   A0A2I4B0T8   A0A2M4AXT0   A0A2M4AXD6   A0A1B6F0L4   A0A3S3NF24   A0A3Q3A0Z4   A0A1A8QNL6   A0A1A8LYT0   A0A1A7ZHF3   A0A1A8I6M3   A0A1A8CWA1   A0A1A8H5K3   A0A151XIX2   A0A210QXV0   A0A1W4XRR7   A0A2M4C0V3   A0A3P9KC96   A0A0K8TPX6   H2MD14   A0A3P9I240   A0A3P9I2E0   A0A3B3C3S9   A0A3S2P8C2   A0A3R7M8A0   A0A3B4BFA5   A0A1Y1L1Q2   A0A3Q3IRC5   A0A3P8ST37   A0A182HA20   A0A0S7H7X2   A0A3Q2DJQ8   E2AYW2   A0A3Q3XEK9   A0A3Q3GQC5  

KEGG

101741453    K08366 biogenesis of lysosome-related organelles complex 1 subunit 4 | (RefSeq) uncharacterized LOC1

GO

GO:0031083  

PANTHER

PTHR16230  

Length:

148

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00581

Exp number, first 60 AAs:

0.0002

Total prob of N-in:

0.11433

outside

1  -  148

 

 

Pi

198.881053

Theta

173.447617

Tajima's D

0.461279

CLR

0.558079

CSRT

0.500974951252437

Interpretation

Uncertain