SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03909
Pre Gene Modal
BGIBMGA010218
Annotation
PREDICTED:_uncharacterized_protein_LOC106131710_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 3.74
 

Sequence

CDS
ATGTGTGAAAAGAGAACAAGAAAAATCAAGAAAGGTTCCCACATTACTCGCCTGCGCGAAGCAAGACGTATACAGCGTCTGCAAAGGATCGCTTCCCCGTCCACTAGCGACGAGTCTAACTCGTCGCCATGCCCTCCAACGGTCGACAAGGCTGCCCAAAACCGCGTCATCTTAGAGCTCGCTTGGAAGACCGTAGCGCTGATGCACAAGAACAGATTGATCCAACAGAAGATCATTGATCTTCAAAAGGAAACGTCACAGTACATACAGTCCGTAATGAGCAACCCTGAGAACAGGAGGCGCTATATGGAACACGTCCGTTTGTACGGTGCGCAACCTACGCAACTTAAGCTATTAGCAGCCGAAAAGAATGTACAGGTCAAAGTGGAGCCCAAAGCGTGA
Protein
MCEKRTRKIKKGSHITRLREARRIQRLQRIASPSTSDESNSSPCPPTVDKAAQNRVILELAWKTVALMHKNRLIQQKIIDLQKETSQYIQSVMSNPENRRRYMEHVRLYGAQPTQLKLLAAEKNVQVKVEPKA

Summary

Pfam
PF02580   Tyr_Deacylase
Interpro
IPR023509   DTD-like_sf        + More
IPR003732   Daa-tRNA_deacyls_DTD       
SUPFAM
SSF69500   SSF69500       
Gene 3D

Ontologies

Topology

Length:
133
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00036
Exp number, first 60 AAs:
6e-05
Total prob of N-in:
0.80112
inside
1  -  133
 
 

Population Genetic Test Statistics

Pi
250.263097
Theta
166.295477
Tajima's D
1.801014
CLR
0.329224
CSRT
0.842857857107145
Interpretation
Uncertain
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