Silkworm Genome Informatics Database

Gene

KWMTBOMO03908

Pre Gene Modal

BGIBMGA013209

Annotation

PREDICTED:_uncharacterized_protein_LOC105381701_[Plutella_xylostella]

Location

Bomo_Chr7(-):6216398-6217535 View in EpiBrowser

Location in the cell

Extracellular Reliability : 1.327 Nuclear Reliability : 1.876

CDS

ATGCTACAGGAAGAATATGATACTTTATGCCAAGTCTTTAGTGACAGTCTTTTGGCTGAAGTTGCAGAAATGAACATTGAATGGCATTTCAACGCACCCTCTTGGCCGAGTGCAGGAGGCCTGTGGGAACGAGCCGTGCAGAGCTTGAAGTGGCATTTAAAAAGAGGCGTAGGAGAACAAAAGTTAACGTTTGAAGAGTATTGCACTATCTTAGCACAACTGGAGGCCTGTCTTAGCTCTAGGCCTTTGTGTTCTTTAACAGAAAACATAGAAGACTTGGATTACCTGTCACCAGCACATTTCTTAAATGGAAGGGTGGGGGTAACCGTTATAGAAACAAAAGAGGACGCTAGAACTAGATGGCATTTGACCAACAGCATATTCAAACAGATTTGGCATAATTGGAAGACAAACTATTTAACACAATTAACAATGCCGCAGAAGTGGGTGAAGCCACAAACAAACATGAAGATTGGAGATATGGTAGTTATTCATGAAGACAATCTTCCGGCTGGAAAATGGCTCATGGGTAGAGTCATAGAAGTGTTTCCCGGCAACGACGGCTATGTCAGGGTGGTATCACTCAAAACAAAAAATGGCATTATTATACAACGACCTGTCGTCAAACTGTCTAAATTGCCCATTGAATCAGCTGAGCAAGTGGACAATTCTGACTATAAGAAAAAACAAAATGATTGTTCTCCTCAACCTACAAAACACAAGCAAAAACAATCAAGACGTGGAAGACTATCGTGTATGGTGATGGCATTAATATTTTTCATGTCATTATGCATCAGCGATGCCTGTAACATAACCGAGCTTCAACAGTATAGTGAATGTGAAAATGTAAATAGTGCTAAGGCAGGGTTTAATGCGCGACCTTCTGTGGTGGACCCTCCGCCTGGTGATGTGAACATTTATGCCAAAGTGTCAAACAAAGCGTGCTCTCCAATACCAAGAAACCCTATATGGACCCTAAGTTCTTAA

Protein

MLQEEYDTLCQVFSDSLLAEVAEMNIEWHFNAPSWPSAGGLWERAVQSLKWHLKRGVGEQKLTFEEYCTILAQLEACLSSRPLCSLTENIEDLDYLSPAHFLNGRVGVTVIETKEDARTRWHLTNSIFKQIWHNWKTNYLTQLTMPQKWVKPQTNMKIGDMVVIHEDNLPAGKWLMGRVIEVFPGNDGYVRVVSLKTKNGIIIQRPVVKLSKLPIESAEQVDNSDYKKKQNDCSPQPTKHKQKQSRRGRLSCMVMALIFFMSLCISDACNITELQQYSECENVNSAKAGFNARPSVVDPPPGDVNIYAKVSNKACSPIPRNPIWTLSS

Uniprot

A0A2H1VPI7 A0A2H1W3G4 A0A2A4K6T9 A0A2A4K9T0 X1XB48 A0A0J7ND98 + More
W8B4C4 W8AW40 A0A0A9WEH4 A0A0K8VHT8 A0A0K8UAH1 Q8I7Q1

Pubmed

24495485 25401762

EMBL

ODYU01003679 SOQ42751.1 ODYU01006052 SOQ47567.1 NWSH01000070 PCG79985.1 + More
NWSH01000022 PCG80664.1 ABLF02066803 LBMM01006539 KMQ90520.1 GAMC01014637 JAB91918.1 GAMC01021574 JAB84981.1 GBHO01037808 JAG05796.1 GDHF01013863 JAI38451.1 GDHF01028680 JAI23634.1 AY180917 AAN87269.1

Proteomes

UP000218220 UP000007819 UP000036403

PRIDE

Q8I7Q1

Pfam

PF12259   Baculo_F        + More
PF18701   DUF5641
PF17921   Integrase_H2C2
PF00230   MIP
PF05585   DUF1758
PF03564   DUF1759
PF05380   Peptidase_A17
PF00665   rve

Interpro

IPR001584   Integrase_cat-core        + More
IPR012337   RNaseH-like_sf
IPR040676   DUF5641
IPR036397   RNaseH_sf
IPR022048   Envelope_fusion-like
IPR000425   MIP
IPR008042   Retrotrans_Pao
IPR023271   Aquaporin-like
IPR008737   Peptidase_asp_put
IPR041588   Integrase_H2C2
IPR005312   DUF1759
IPR010750   SGF29_tudor-like_dom
IPR001995   Peptidase_A2_cat

SUPFAM

SSF53098 SSF53098 + More
SSF81338 SSF81338

Gene 3D

3.30.420.10 1.20.1080.10

ProteinModelPortal

A0A2H1VPI7 A0A2H1W3G4 A0A2A4K6T9 A0A2A4K9T0 X1XB48 A0A0J7ND98 + More
W8B4C4 W8AW40 A0A0A9WEH4 A0A0K8VHT8 A0A0K8UAH1 Q8I7Q1

KEGG

101745788 no KO assigned | (RefSeq) uncharacterized LOC101745788

GO

GO:0016021 GO:0015074 GO:0003676 GO:0015267 GO:0016301 GO:0004190

Length:

328

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.75185

Exp number, first 60 AAs:

0.00022

Total prob of N-in:

0.12093

outside

1 - 328

Pi

298.322089

Theta

184.976013

Tajima's D

1.92815

CLR

76.544834

CSRT

0.870406479676016

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics