Gene

KWMTBOMO03904

Pre Gene Modal

BGIBMGA010162

Annotation

Facilitated_trehalose_transporter_Tret1_[Papilio_machaon]

Location

Bomo_Chr7(-):6117501-6129045      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.98

CDS

ATGTCTCCAAACTTACTTCTGTTGGATCTTGGTATGGCCGTAAGCTTCCCAACCATAGCTTTACCGGCTTTGCTGAATGCCACAGAAGGATTGTCTCAGACGCAAGTAGAGGCTTCGTGGTTTGGTAGCATTTCATATCTTGCTCAACCTTTTGGGGCTCTGCTATCTGGTCCACTTGTAGACTACTTTGGAAGGAAAAAAGCAAACTTTTTAGTTAATATACCTCATTTAATAGCTTGGATCTTGATGTATTTTGCCTGGAATGTACCGATTTTATTTATAGCAAATACTCTGTTAGGGATTGGAACCGGGATAATGGAAGCGCCAATAAATTCTTATGTTGGGGAAATTAGTGAGCCCACGATGCGTGGAGCCCTATGCACCGTCACTCAAATATTCACGTCCATTGGAATATTGGTAATGTATTTTCTGGGAACAATAGTAGATTGGCGACAAGCGGCAATCATATGTCTAGGAGTACCACTTCTTTCCATGCTATTAGTTTTACTTGTACCCGAAACTCCTGTCTGGCTACTGTTCAAAGGGAGAGAAAAAGAAGCATTAAAATCTTTGTGCTACCTTCGAGGGTGGACAACTGTTGACAATGTAAAGGACGAATATGATAAATTAGCAGTTTATGCGAAGAGTTTGCAAAACTGCGAAATCTGTCTCGCCACTGATGACGTTAAAATTGAGCAATGTGTCCACGCTCGAATGAATCCAGTAAAAAGATACATCTTAAAGATCAAATGCGTAATGTTCGGCAAAGAGACTCTAAGGCCATTAACATTGGTAATTCTATATTTTATGTTCTACACTATGAGTGGACTCATACCTATTAGACCTAATATGGTCAATGTATGTGGAGCCTTCGGGATGGTGGACAATGGAAAGAAGATAGTGCTAATGATCGGTGTTATAACTGTAATCATGGGCGTCATAGTCATCGGTATCATCAAAATGACCGGTAAACGAAAATTGATTATACTAGCGCTTCTCGGCACTGGTCTTTCCAGCACTGGACTAAGTATATACGCAAGATTACACGTACCTGATTCGGTGTCTTCATACGATCCTGCCACATTTCCTGTAGAAAAAAGCTACATACCTCAGGCGCTATTGTATTCCTTGGCGGTGTTTACTGGGCTCTGTATACCTTGGGTGCTGCTTGGAGAAATGTTCCCTTTTAAGAGTCGTGCCTCAGCTCAAGGAATCGCTGCTGCTTGGAGTTACGTGGTGACGTTCTTGGGATCAAAAACGTTAATCGATTTGGAGAATTCGCTTAAGCTGTGGGGAACTTTTGCCGTTTATGCAGTTTTCGCATTTGTTGGCACAATATATTTATATTTCTTCATGCCTGAAACTGAAGGGAAGACGCTTCAAGACATCGAAGATTATTATAAAGGGGAATTGAGAATATTCGCGAACGATCCTTTTATAAATTACTTTAAGAGATTCAAGAGAAAACAGTCTGTCTCTTAG

Protein

MSPNLLLLDLGMAVSFPTIALPALLNATEGLSQTQVEASWFGSISYLAQPFGALLSGPLVDYFGRKKANFLVNIPHLIAWILMYFAWNVPILFIANTLLGIGTGIMEAPINSYVGEISEPTMRGALCTVTQIFTSIGILVMYFLGTIVDWRQAAIICLGVPLLSMLLVLLVPETPVWLLFKGREKEALKSLCYLRGWTTVDNVKDEYDKLAVYAKSLQNCEICLATDDVKIEQCVHARMNPVKRYILKIKCVMFGKETLRPLTLVILYFMFYTMSGLIPIRPNMVNVCGAFGMVDNGKKIVLMIGVITVIMGVIVIGIIKMTGKRKLIILALLGTGLSSTGLSIYARLHVPDSVSSYDPATFPVEKSYIPQALLYSLAVFTGLCIPWVLLGEMFPFKSRASAQGIAAAWSYVVTFLGSKTLIDLENSLKLWGTFAVYAVFAFVGTIYLYFFMPETEGKTLQDIEDYYKGELRIFANDPFINYFKRFKRKQSVS

Similarity

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.

Uniprot

A0A0N1IPR7   A0A194PLE0   H9JKW0   A0A194PSZ3   A0A0N1PJU5   A0A2H1WJR8   + More
A0A212F4D1   A0A2A4K0B8   A0A212FGM4   A0A0L7KVV7   A0A3S2LTC9   A0A212FGM3   A0A194PMM6   A0A2A4K146   A0A0L7KQ05   A0A2W1BPD0   A0A2W1B4Q0   A0A182FS13   A0A2M3Z0P0   A0A2M3ZG53   A0A1L8DF11   A0A2M3Z0I1   A0A1L8DFC7   A0A2M4AGT5   A0A2M4AH60   A0A2M4BIQ4   A0A2M4BIL1   A0A2M4BJE1   W5J8E4   B0WLM4   A0A182V5A4   Q7PX65   A0A182X9E6   A0A182U3Q5   A0A182HKD2   A0A1Q3FRP9   A0A182RSB7   A0A182IUY9   A0A182R125   A0A1B0CIY2   Q16TJ6   A0A182NQQ7   A0A182YHY6   A0A182VVZ1   A0A182JVE9   A0A182GM49   A0A023ETX2   A0A1B0CIY3   A0A182PRT8   A0A2J7PIK9   A0A182MTT7   A0A1L8DF49   A0A0K8TQS7   U5EU35   A0A2P8Y8K3   A0A1B0C8F7   A0A1B6HSC1   A0A182L8L4   A0A1B0CIY4   A0A1B6BX46   A0A1B6IZ61   A0A2P8ZNY9   A0A067RQY9   A0A0A8J7Z9   A0A0A8J8M1   A0A067QV41   A0A2J7PIN1   A0A1B6H9R4   A0A1B0CIY0   A0A2J7QL19   A0A2H8TCU3   A0A2J7QL26   A0A023EZ96   A0A1B6EU41   A0A1B6M6C7   A0A1B6JJ73   A0A2J7QC67   A0A1B6E8P1   A0A146LN52   A0A224XL30   A0A0A9ZCC5   A0A2J7QC75   T1IC40   A0A069DUA8   A0A2P8XHU0   T1HYD0   A0A2P8Y8I9   A0A224XK01   D4AHX2   A0A1B6M0V4   A0A1B6IEH6   A0A1S3D6K1   A0A1B6GQD0   A0A146KUE8  

Pubmed

26354079    19121390    22118469    26227816    28756777    20920257    + More
23761445    12364791    14747013    17210077    17510324    25244985    26483478    24945155    26369729    29403074    20966253    24845553    25474469    26823975    25401762    26334808    20705135   

EMBL

KQ460317    KPJ15996.1    KQ459600    KPI94251.1    BABH01011474    BABH01011475    + More
KPI94250.1    KPJ15995.1    ODYU01009059    SOQ53206.1    AGBW02010404    OWR48573.1    NWSH01000329    PCG77368.1    AGBW02008643    OWR52884.1    JTDY01005248    KOB67201.1    RSAL01000013    RVE53405.1    OWR52886.1    KPI94248.1    PCG77362.1    JTDY01007184    KOB65398.1    KZ149942    PZC76902.1    KZ150329    PZC71362.1    GGFM01001257    MBW22008.1    GGFM01006677    MBW27428.1    GFDF01009031    JAV05053.1    GGFM01001274    MBW22025.1    GFDF01009024    JAV05060.1    GGFK01006601    MBW39922.1    GGFK01006805    MBW40126.1    GGFJ01003743    MBW52884.1    GGFJ01003736    MBW52877.1    GGFJ01003767    MBW52908.1    ADMH02002101    ETN59145.1    DS231988    EDS30566.1    AAAB01008987    EAA01784.5    APCN01000826    GFDL01004766    JAV30279.1    AXCN02001503    AJWK01013897    AJWK01013898    CH477648    EAT37826.1    JXUM01073814    JXUM01073815    KQ562796    KXJ75112.1    GAPW01000773    JAC12825.1    AJWK01013900    NEVH01025126    PNF16170.1    AXCM01002705    GFDF01009002    JAV05082.1    GDAI01000891    JAI16712.1    GANO01004060    JAB55811.1    PYGN01000805    PSN40582.1    AJWK01000542    GECU01030165    JAS77541.1    AJWK01013901    GEDC01031445    JAS05853.1    GECU01015504    JAS92202.1    PYGN01000006    PSN58216.1    KK852475    KDR23065.1    AB901072    BAQ02372.1    AB901059    BAQ02359.1    KK853229    KDR09649.1    PNF16169.1    GECU01036228    GECU01032505    JAS71478.1    JAS75201.1    AJWK01013892    AJWK01013893    NEVH01013254    PNF29284.1    GFXV01000110    MBW11915.1    PNF29286.1    GBBI01004167    JAC14545.1    GECZ01028516    JAS41253.1    GEBQ01008509    JAT31468.1    GECU01008471    JAS99235.1    NEVH01016291    PNF26177.1    GEDC01002997    JAS34301.1    GDHC01010522    JAQ08107.1    GFTR01007114    JAW09312.1    GBHO01000682    JAG42922.1    PNF26178.1    ACPB03000842    GBGD01001176    JAC87713.1    PYGN01002079    PSN31571.1    ACPB03023997    PSN40576.1    GFTR01006278    JAW10148.1    AB550000    BAI83421.1    GEBQ01010411    JAT29566.1    GECU01022368    JAS85338.1    GECZ01005138    JAS64631.1    GDHC01018701    JAP99927.1   

Proteomes

UP000053240    UP000053268    UP000005204    UP000007151    UP000218220    UP000037510    + More
UP000283053    UP000069272    UP000000673    UP000002320    UP000075903    UP000007062    UP000076407    UP000075902    UP000075840    UP000075900    UP000075880    UP000075886    UP000092461    UP000008820    UP000075884    UP000076408    UP000075920    UP000075881    UP000069940    UP000249989    UP000075885    UP000235965    UP000075883    UP000245037    UP000075882    UP000027135    UP000015103    UP000079169   

PRIDE

H9JKW0   

Pfam

PF00083   Sugar_tr

Interpro

IPR036259   MFS_trans_sf        + More
IPR020846   MFS_dom       
IPR005829   Sugar_transporter_CS       
IPR005828   MFS_sugar_transport-like       
IPR003663   Sugar/inositol_transpt       
IPR017896   4Fe4S_Fe-S-bd       

SUPFAM

SSF103473   SSF103473       

CDD

cd06174  MFS

ProteinModelPortal

A0A0N1IPR7   A0A194PLE0   H9JKW0   A0A194PSZ3   A0A0N1PJU5   A0A2H1WJR8   + More
A0A212F4D1   A0A2A4K0B8   A0A212FGM4   A0A0L7KVV7   A0A3S2LTC9   A0A212FGM3   A0A194PMM6   A0A2A4K146   A0A0L7KQ05   A0A2W1BPD0   A0A2W1B4Q0   A0A182FS13   A0A2M3Z0P0   A0A2M3ZG53   A0A1L8DF11   A0A2M3Z0I1   A0A1L8DFC7   A0A2M4AGT5   A0A2M4AH60   A0A2M4BIQ4   A0A2M4BIL1   A0A2M4BJE1   W5J8E4   B0WLM4   A0A182V5A4   Q7PX65   A0A182X9E6   A0A182U3Q5   A0A182HKD2   A0A1Q3FRP9   A0A182RSB7   A0A182IUY9   A0A182R125   A0A1B0CIY2   Q16TJ6   A0A182NQQ7   A0A182YHY6   A0A182VVZ1   A0A182JVE9   A0A182GM49   A0A023ETX2   A0A1B0CIY3   A0A182PRT8   A0A2J7PIK9   A0A182MTT7   A0A1L8DF49   A0A0K8TQS7   U5EU35   A0A2P8Y8K3   A0A1B0C8F7   A0A1B6HSC1   A0A182L8L4   A0A1B0CIY4   A0A1B6BX46   A0A1B6IZ61   A0A2P8ZNY9   A0A067RQY9   A0A0A8J7Z9   A0A0A8J8M1   A0A067QV41   A0A2J7PIN1   A0A1B6H9R4   A0A1B0CIY0   A0A2J7QL19   A0A2H8TCU3   A0A2J7QL26   A0A023EZ96   A0A1B6EU41   A0A1B6M6C7   A0A1B6JJ73   A0A2J7QC67   A0A1B6E8P1   A0A146LN52   A0A224XL30   A0A0A9ZCC5   A0A2J7QC75   T1IC40   A0A069DUA8   A0A2P8XHU0   T1HYD0   A0A2P8Y8I9   A0A224XK01   D4AHX2   A0A1B6M0V4   A0A1B6IEH6   A0A1S3D6K1   A0A1B6GQD0   A0A146KUE8  

PDB

4YB9     E-value=1.94798e-11,     Score=168

KEGG

101739796    K08145 MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member

GO

GO:0016021   GO:0022857   GO:0008643   GO:0005887   GO:0005351   GO:0005215   GO:0006412   GO:0007219   GO:0007275   GO:0004672   GO:0048384   GO:0055085  

Length:

493

Number of predicted TMHs:

10

Exp number of AAs in TMHs:

235.98613

Exp number, first 60 AAs:

37.57875

Total prob of N-in:

0.21222

POSSIBLE N-term signal

sequence

outside

1  -  4

TMhelix

5  -  27

inside

28  -  39

TMhelix

40  -  62

outside

63  -  76

TMhelix

77  -  99

inside

100  -  125

TMhelix

126  -  148

outside

149  -  157

TMhelix

158  -  180

inside

181  -  257

TMhelix

258  -  280

outside

281  -  299

TMhelix

300  -  319

inside

320  -  325

TMhelix

326  -  348

outside

349  -  367

TMhelix

368  -  390

inside

391  -  429

TMhelix

430  -  452

outside

453  -  493

 

 

Pi

268.417669

Theta

182.923029

Tajima's D

1.432972

CLR

0.184231

CSRT

0.770911454427279

Interpretation

Uncertain