SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03903
Pre Gene Modal
BGIBMGA010216
Annotation
PREDICTED:_serine_protease_inhibitor_12_isoform_X1_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 2.882
 

Sequence

CDS
ATGAAAGTGTTTATTAGTCTCACAGTATGCTGTTTCGTGTTAAGCGCGGATTCACAAAGCAGCTTCCGGACACAGAATCAGTATCCCAAATACGATTCCACAATCAATTCAGATCAAATTTATTTTGACGACAACCGACCTAGTGGCTCTATTAATATTCAAAAGGAATTATCTAATTTAAATGGATTGACGATTGGAACAAAAATACCGATTATTAACCCCAATTTCGGAGCTCCGCAATATAGTCCTTATGCAAACAATGTTATAATTCAACCGTCAATACAAACTTATAACCAAGAAACCACCAAAATCGTTCCTCAAAAGTCCGGCACACCAGCTAAAAAGATGACAGATACGTTTTTTCAAACGCAAGTAACACGACCCGAGATCGATAGTGTCGATTATGCTATAACACATTTTGGAATAAATATATTTAAGCAAATAACAAGCAGTCAGCCAGGTAACATGGTGGTATCTCCATTCTCCATCACGACATTATTGGCTCTTCTTCAACAAGGCGCTACAGGATCCACTTTGGATCAGATCAGTGCAGCTTTGCATCTAGCACCATTAAAGACTTCAGAGGTATTTAGGAATGTCATGGAAAACGTACAAAAACGTAAATCTCAGAATATACTTAAAACGTTGAATAACATATTTGTGGCCGAAACGTTCAACCTCAATCGTGATTTCGAGAGAATTGCAAAAAGCTATTTCGGAAGTGATGTAACTCTCATGAATTTTGGAAGACCCGATGTGGCCATACAGAGGATCAATAACTGGGTAGGCGCAATGACAAATGGTAAAATAGAAAATTTATTATCACAAGATGCCATTAGCCAGAATTCGCAGCTGGTTCTCGTCAACGTGGTTTACTTTAAAGGATTATGGCAGATCCCGTTTAGAACGGAATCAACTGTACCGCAACCATTTCTTTTAAAGGGTGGAATACAGAAAACTGCACCATTCATGAGAACGAGACGCTACTTCAGAACGGGCTTGGATCCCATCACCAACGCGAAAGTTATCTCCTTGCCGTTTGAAAAAGACCAATATTCGCTTTTGGTTGTTTTACCGCATGAACAATCTGACATCGACACACTGATTTCTAGATTAACAGTGGAACAACTTATCGCTTACCAAAACTTCACAGCAATGGATGTTGAACTGGAATTGCCTAAATTTACAGTAAAGGGGGATACTGATTTAGTGCCGGTATTCAATAGGATGGGAATATCAAACATGTTTAGTAATCGCGCAGAGCTATTTGGCTTAGGAACCTTTAGAGAGTTTTCTCCGCAAGTTTCGTCCGCTGTGCATTCGGCAGTACTGTCCATTGATGAAAAGGGTGGTTCTGCAGCTGCTGCAACATCTTTTGGTGTTGTAGCGTTGTCTTTCGATGATCCTGCAGTAGTCTTTAAAGCGAACAGACCCTTCTTAGCCGTACTATGGGACACTGCTCTAAGCTTACCTCTGTTTATGGCTAAAATTGAAGACCCCACAGAATAA
Protein
MKVFISLTVCCFVLSADSQSSFRTQNQYPKYDSTINSDQIYFDDNRPSGSINIQKELSNLNGLTIGTKIPIINPNFGAPQYSPYANNVIIQPSIQTYNQETTKIVPQKSGTPAKKMTDTFFQTQVTRPEIDSVDYAITHFGINIFKQITSSQPGNMVVSPFSITTLLALLQQGATGSTLDQISAALHLAPLKTSEVFRNVMENVQKRKSQNILKTLNNIFVAETFNLNRDFERIAKSYFGSDVTLMNFGRPDVAIQRINNWVGAMTNGKIENLLSQDAISQNSQLVLVNVVYFKGLWQIPFRTESTVPQPFLLKGGIQKTAPFMRTRRYFRTGLDPITNAKVISLPFEKDQYSLLVVLPHEQSDIDTLISRLTVEQLIAYQNFTAMDVELELPKFTVKGDTDLVPVFNRMGISNMFSNRAELFGLGTFREFSPQVSSAVHSAVLSIDEKGGSAAAATSFGVVALSFDDPAVVFKANRPFLAVLWDTALSLPLFMAKIEDPTE

Summary

Similarity
Belongs to the serpin family.
Belongs to the cyclin family.
EMBL
BABH01011470    BABH01011471    AB017518    BAB33293.1    RSAL01000013    RVE53402.1    + More
JN033740    AEW46893.2    MG732913    AYK02795.1    ODYU01009059    SOQ53205.1    NWSH01000329    PCG77369.1    KZ150329    PZC71363.1    AGBW02010404    OWR48572.1    KQ460317    KPJ15997.1    KQ459600    KPI94252.1    KK853245    KDR09404.1    NEVH01015307    PNF27052.1    FX985307    BAX07320.1    GFDL01008105    JAV26940.1    DS232397    EDS41130.1    GFDL01008028    JAV27017.1    NEVH01003502    PNF40585.1    CH479181    EDW31427.1    PNF40584.1    CM000071    EAL24740.2    KRT01513.1    KRT01514.1    PNF40589.1    PNF40588.1    CM000157    KRJ98191.1    GFDL01008237    JAV26808.1    MTYJ01000095    OQV15037.1    KRJ98198.1    KRJ98196.1    GFDL01008249    JAV26796.1    PCG77372.1    GFDL01008070    JAV26975.1    KK852898    KDR14147.1    FX985290    BAX07303.1    AE013599    AJ428889    AAS64783.1    CAD21901.1    BT025046    AJ428885    AAG22209.1    ABE73217.1    CAD21897.1    KRJ98197.1    BT125838    AJ428884    AAS64782.1    ADR83723.1    CAD21896.1    AJ251747    CAB63099.1    AJ428880    AAG22208.1    CAD21892.1    CH954177    KQS70986.1    GFDL01008147    JAV26898.1    KRJ98202.1    EDW89101.2    PYGN01000301    PSN48953.1    FX985306    BAX07319.1    KQS70988.1    EDV59772.2    EDS41129.1    CH963846    KRF97544.1    PYGN01000511    PSN45076.1    PNF27058.1    AAAB01008807    EAA04367.4    APCN01003685    AHAT01018998    AFYH01131279    AFYH01131280    CMVM020000248    FM242707    CAR85748.1    AB014091    BAA36581.1    JX211374    AFM89688.1    KP128093    AKO62874.1   
Pfam
PF00079   Serpin        + More
PF00134   Cyclin_N
Interpro
IPR000215   Serpin_fam        + More
IPR023796   Serpin_dom       
IPR042185   Serpin_sf_2       
IPR042178   Serpin_sf_1       
IPR036186   Serpin_sf       
IPR013763   Cyclin-like       
IPR006671   Cyclin_N       
IPR036915   Cyclin-like_sf       
IPR023795   Serpin_CS       
IPR015555   AT-III       
SUPFAM
SSF56574   SSF56574        + More
SSF47954   SSF47954       
Gene 3D
PDB
6CJ7     E-value=5.23877e-104,     Score=966

Ontologies

Topology

SignalP
Position:   1 - 18,         Likelihood:  0.995761
 
 
Length:
502
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0752100000000001
Exp number, first 60 AAs:
0.01728
Total prob of N-in:
0.00387
outside
1  -  502
 
 

Population Genetic Test Statistics

Pi
27.952231
Theta
212.845139
Tajima's D
0.067028
CLR
0.435027
CSRT
0.385030748462577
Interpretation
Uncertain
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