SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03902
Pre Gene Modal
BGIBMGA010215
Annotation
cyclin_N-terminal_domain_containing_2_[Danaus_plexippus]
Location in the cell
Nuclear   Reliability : 3.517
 

Sequence

CDS
ATGGAGGCGAATAAAGAAAACGAGAATCGTTTTATACCTCAAACAAGAATTCCATTACCGATGGAGCCATTGCCAGCATTACCGAGACATCTACTAAAAGAGATAAATTTTAAAGCATTCGAAAATAGCAGACAGCCCTTGAAGACGATTAACTCACAATCCATGCCTGGTCAGAGCAATCAAAGTAAGTCCTTTAATCCTATGGTACCTGGACACAGCCGCGGCAAAATCGCACCTAATAAACCGAAATCACCGACCAATTTTGATTCGAAACATGTAACAACGAGACAAGGAAATGACGATTTGGATTGGAACTACAATATATTTAAAGACGAGAGAAATAACAGTGTAATTTCCGTAAGTGACGAGGAGAATGATAATGAAAATTTAAAAGAATTGAGGTATTTTGTTGAGAATAGAACTAAGAATTGTTTTGAAGATGCTAGAATGGCTATTACACCAGTAGTGAAGTCTTCGACTCTGGAGGCTGGTGGTGTTCGAAATATAAAAAGAAGCCTGAAGAGACCACATAGCAGGGAGTTGCAAGGTCTCTCTCCGATGGAAAAACAAGAGAGAAAAGCAGAAGAAAGAGTCAAGAGAAGACTACATTTTAACGAGCGTTTGCAAGAAAGATTACAGTCACCCGACTACCTGAAGAAATGCTACATGAAATGTATGACCCGGGACTATACGACCGATATGTTCAACTATTTAATATGTGCTGAAACGAAGCCATTGGAGGTACCTCGAACGTCTAGTATTACACGAGCTTGCGTTATCAACTGGCTAATCAAAGTTAATGGATCTGACGGGAATCCAGCTATCATTCACACTGCCTGTTGGTACCTCGATTCGATCTTAGGCACCAGTCAAGTTCAGCTGGACAAGCTGCAGCTCGTTGCGGCAGCTTGTTATTGGATAGCGCAAAAGCTGCACGGGCCAGTGCTCACTGCGACGAGATTAGTGAAATGCGCTAATCACGCATTTTCAGCGAGTAGATTGATGGCTGCCGAGAAAGTTGTTCTGCAGAAACTTAAATTTCCAACCCAACCAGTGGTCCCACAGGAATTCATAACTTACTTATCATGGTGGTGTGACAATAACCATCCCGGAGAGATTGAAGTTGCAGCCACCTTTTTATGCATGTCAGGACTAATGGTAGACAAAGCGCTATGCGAAGAGTATCCATCAGCTATAGCGGCAGCTTCAGTTAGAAATGCTCTGCTGTTGCTAAGAAAACGGGATCTGATGATGCGACTGGCGATGTGTCCTGTATACAAATCAGCAGAGAAGAAAACTACGAACATGAGCTACGTGTGCTCCATACTCCGTAGGGCTGTACGTACGATTGCGGCTCCGATCTATGAATACAAAGCGCCCTTTGACCACTACGGTATACCTCCGAACTACATAGCACAGAGGATCATCAATGCTGCCAACGATCTCGCTGTCATCGATACTAGAGTTATAAGCAACGACCAGTCAACACTTTTAACTAGCCTGTATAATAACTAG
Protein
MEANKENENRFIPQTRIPLPMEPLPALPRHLLKEINFKAFENSRQPLKTINSQSMPGQSNQSKSFNPMVPGHSRGKIAPNKPKSPTNFDSKHVTTRQGNDDLDWNYNIFKDERNNSVISVSDEENDNENLKELRYFVENRTKNCFEDARMAITPVVKSSTLEAGGVRNIKRSLKRPHSRELQGLSPMEKQERKAEERVKRRLHFNERLQERLQSPDYLKKCYMKCMTRDYTTDMFNYLICAETKPLEVPRTSSITRACVINWLIKVNGSDGNPAIIHTACWYLDSILGTSQVQLDKLQLVAAACYWIAQKLHGPVLTATRLVKCANHAFSASRLMAAEKVVLQKLKFPTQPVVPQEFITYLSWWCDNNHPGEIEVAATFLCMSGLMVDKALCEEYPSAIAAASVRNALLLLRKRDLMMRLAMCPVYKSAEKKTTNMSYVCSILRRAVRTIAAPIYEYKAPFDHYGIPPNYIAQRIINAANDLAVIDTRVISNDQSTLLTSLYNN

Summary

Similarity
Belongs to the cyclin family.
Belongs to the serpin family.
Pfam
PF00134   Cyclin_N        + More
PF00079   Serpin
Interpro
IPR013763   Cyclin-like        + More
IPR006671   Cyclin_N       
IPR039361   Cyclin       
IPR036915   Cyclin-like_sf       
IPR036186   Serpin_sf       
IPR000215   Serpin_fam       
IPR042178   Serpin_sf_1       
IPR042185   Serpin_sf_2       
IPR023796   Serpin_dom       
SUPFAM
SSF47954   SSF47954        + More
SSF56574   SSF56574       
Gene 3D
PDB
4BCQ     E-value=0.000266327,     Score=106

Ontologies

Topology

Length:
504
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01664
Exp number, first 60 AAs:
0
Total prob of N-in:
0.01161
outside
1  -  504
 
 

Population Genetic Test Statistics

Pi
155.490646
Theta
192.551783
Tajima's D
0.295826
CLR
0.545162
CSRT
0.452977351132443
Interpretation
Uncertain
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