SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03891  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA010165
Annotation
PREDICTED:_HEAT_repeat-containing_protein_5B_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 1.048
 

Sequence

CDS
ATGGAAGTGTCCCATTCCTTGACTCTAAACGAAACAGCATTGCAGCAGCTGCCAGATGATAAAAAGCCACATTTCATATTTGAATGGCTACGGTTCCTTGACAAGGTGTTGGTTGCAGCACACAAGAATGATATTAAAGCTTGCCAACAAAAACTTGTTGCCCAATTAGTTAATCTTCTACGTGAATCCCTTGGTGCACCTGCTAGAAAACTGCTTGCCCGGAATTTAGCCATACTCTTCTCTGTCGGGGATACCTTCCTTTTATTTGATACAGTAAATAAGTGCAATGACATCATCAAAGTGAAGGATGACTCGCCTTCATACATGCCGACTAGATTGGCTGCAATATGCTGCCTTGGTAGTATGTATGAGAAGCTAGGTAGAATGATGGGAAGATCACATGAAGAAACTGTTACTACTCTGGTCAGGTCCTTAAAGAGTGCAGAATCGCAAACCAGGCTTGAAATCATGAATACACTGGAAAAGATCTGTGTTGGGATAGGATCTGCTGCTCCAGCGGCAGTGAGAGAAGTATCTCGTGCTGCTCGTACAGCATTGATGTCAGATCGGTCTGCAGCAGTGAGAGCTGCGGCAGCACACACCCTGACTAACTTGTTGCCACTAATGAGACTGACACCAGCAGATCTTGATGCTATAGCTGCTGCTTGTCTCCGTGCCGCCAATCCCAGTGATTATATTTTAAGATGTGCAATTGCGGAACTTTTGGGATCTCTAATAGCAACAACACAAGCTGCTGAAGTGACGAATAACAACAAGTTTAAAGTCGGCTTGCAACCAGTGCAACAAAATAAGAAGGATCCTCCTAAAAATGTAGTCTCATTAGACGAAGCTCTGAACTTATTGATGGGCGCTTTTCTAAGAGGGGGCACGTCGTTCCTAAAGGGTGAAATTATTAAATCTGGTTCCGGTGTCAACAGGGAAGTTAGAGTATGTGTTACAAATGCATATGTCGTGTTCGTGCAGAACATGGGAGGAGTTTGGTTGGAACGTAACATAACTACGTTTTTAGCTCACGTATTGGATTTGGTGGCTAATCCTAAAGCAGCTAGTTCTCATGTCGACGCGGTTTATTCAAGAAAGTGCATTAGTTATATTCTGCGCAACACTCTCGGCAAGATGCTAGGGGAGAAAGCACAAGCGTCGGCGTGTCGGGAGATCATACAGATTGTTGTCAAACAAATGAACAGCATCGACTTTAATCCGGAAAACGCGAAGGATTGTAATCAGGAAACTTTGTTTAGTCAGCACCTTTTAGTGTGTGCTCTAATGGAAGCGGGAGAATTGGCCTTGCAGCTCGGTACTTCAATTCAGAATCTCATATCAGATACATCATTGAATATGGTTGAAGCTATATGTAGTGTGAGTGAATTGGAAGTGCCTCAAAAATCAACGCAAAAAATGTCGATTTTTGATGTTGTTTTCCATTGTTGA
Protein
MEVSHSLTLNETALQQLPDDKKPHFIFEWLRFLDKVLVAAHKNDIKACQQKLVAQLVNLLRESLGAPARKLLARNLAILFSVGDTFLLFDTVNKCNDIIKVKDDSPSYMPTRLAAICCLGSMYEKLGRMMGRSHEETVTTLVRSLKSAESQTRLEIMNTLEKICVGIGSAAPAAVREVSRAARTALMSDRSAAVRAAAAHTLTNLLPLMRLTPADLDAIAAACLRAANPSDYILRCAIAELLGSLIATTQAAEVTNNNKFKVGLQPVQQNKKDPPKNVVSLDEALNLLMGAFLRGGTSFLKGEIIKSGSGVNREVRVCVTNAYVVFVQNMGGVWLERNITTFLAHVLDLVANPKAASSHVDAVYSRKCISYILRNTLGKMLGEKAQASACREIIQIVVKQMNSIDFNPENAKDCNQETLFSQHLLVCALMEAGELALQLGTSIQNLISDTSLNMVEAICSVSELEVPQKSTQKMSIFDVVFHC

Summary

EMBL
BABH01011450    BABH01011451    BABH01011452    BABH01011453    BABH01011454    BABH01011455    + More
BABH01011456    BABH01011457    NWSH01000329    PCG77366.1    ODYU01009759    SOQ54409.1    RSAL01000013    RVE53393.1    KQ460075    KPJ17935.1    KZ149914    PZC77993.1    KK853280    KDR09039.1    GGFM01001040    MBW21791.1    GDUN01001041    JAN94878.1    CH477837    EAT35779.1    CM000364    EDX12058.1    GEDC01008749    JAS28549.1    KQ971307    KYB29694.1    EFA11040.2    AAAB01008799    EAA45525.5    APCN01001981    JXUM01064328    JXUM01064329    JXUM01064330    JXUM01064331    KQ562293    KXJ76215.1    KB632399    ERL94698.1    AXCN02001208    GANO01000182    JAB59689.1    GEZM01051807    JAV74690.1    ATLV01019181    ATLV01019182    KE525264    KFB43904.1    KA650496    AFP65125.1    DS235283    EEB14387.1    GECZ01005892    JAS63877.1    GBYB01011178    JAG80945.1    GBYB01011180    JAG80947.1    GECZ01013907    JAS55862.1    GBYB01011182    JAG80949.1    NNAY01000392    OXU28698.1    GFDL01007672    JAV27373.1    GFDL01007684    JAV27361.1    DS231918    EDS26262.1    CVRI01000047    CRK98297.1    KZ288220    PBC32144.1    KQ976738    KYM75863.1    BT024961    ABE01191.1    QOIP01000008    RLU19482.1    ADTU01021187    GL766328    EFZ15352.1    KQ981208    KYN44743.1    KQ435878    KOX69993.1    LBMM01004233    KMQ92675.1    KQ977372    KYN03269.1    GL436803    EFN71448.1    GL452263    EFN77661.1    AJVK01007411    AJVK01007412    KK107109    EZA59083.1    KQ982351    KYQ57276.1    GECZ01006076    JAS63693.1    GECZ01019503    JAS50266.1    GBHO01009807    JAG33797.1    CH480821    EDW55300.1    CH954181    EDV48212.1    BT023946    AE014297    ABB36450.1    ACZ94845.1    AAF54180.1    GFTR01008936    JAW07490.1    BT023795    AAZ41804.1    ACZ94844.1    AAG22133.2    AGB95745.1    AGB95746.1    GL888208    EGI64925.1    CM000160    KRK03057.1    EDW96301.1    KRK03056.1    KRK03055.1    KA646787    AFP61416.1    JRES01000953    KNC26845.1    ACPB03005729    CH933806    KRG01836.1    CH902617    EDV42757.2    KRG01833.1    KRG01834.1    EDW15955.1    CM000070    EIM52872.2    KRG01835.1   
Interpro
IPR011989   ARM-like        + More
IPR016024   ARM-type_fold       
IPR040108   Laa1/Sip1/HEATR5       
SUPFAM
SSF48371   SSF48371       
Gene 3D

Ontologies

Topology

Length:
483
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.12598
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00682
outside
1  -  483
 
 

Population Genetic Test Statistics

Pi
278.411096
Theta
172.404781
Tajima's D
1.84398
CLR
0.004609
CSRT
0.852707364631768
Interpretation
Uncertain
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