SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03882
Annotation
Uncharacterized_protein_OBRU01_25620_[Operophtera_brumata]
Location in the cell
Extracellular   Reliability : 1.035 Nuclear   Reliability : 1.635
 

Sequence

CDS
ATGTTCTTTGTTTTTTTCAATTTATTGACCAACATTATCTTCGTAAAATGTTCCCTTGATATCACTAATGCAGAACTAACCTATTTATCTCAACGTTTGACTTTAAACGAGTGTCGCCTCTTACTAACTACATTGTATGCAAAACCTTACAACACATCAGATAAGTTGATTTCGATTCCCAAATCTATACCAAATAAGGCGACTTGTCTTAAACTTCTACTAGAATGGAATCGTGGAGATGCTGACTTAAGAGATAATGAAAAATGTCATGTTGATGTGGCACATATAATGCGCAAACTAAAAAGAGATGATCTAGCAGATTGGTTAGAAAAATCAGTATTCAAAAACCTAGCTAAAGATGTTAATGATACTTTGAATAACGCTTTTAGAGCCGATTCTGGAGGACAGCTAAAGAAGAAATTGTATTTGGGAGATAAAGGCATTGAAGACGAACATAATTGGAGTGTATTTGAATACTTTCTGGCATTATTTCTCGTAAGTGTTGTAATTATAGTAATGATAAATTTATATCGTTTATTGACTCTTGTTTGTAGAAGAGACGAAAAGAAGAAGCCTGATGAAGAAACAATAGATCTTCTCAGTCGTGGATCGGAAAGCGATCAAGAAGTTGTATTTGATTATAATTTAATTTATAAAAGAGATAAAAAGATGACTGAAACTCTACAAAGTGATTAA
Protein
MFFVFFNLLTNIIFVKCSLDITNAELTYLSQRLTLNECRLLLTTLYAKPYNTSDKLISIPKSIPNKATCLKLLLEWNRGDADLRDNEKCHVDVAHIMRKLKRDDLADWLEKSVFKNLAKDVNDTLNNAFRADSGGQLKKKLYLGDKGIEDEHNWSVFEYFLALFLVSVVIIVMINLYRLLTLVCRRDEKKKPDEETIDLLSRGSESDQEVVFDYNLIYKRDKKMTETLQSD

Summary

Interpro
IPR011029   DEATH-like_dom_sf       
SUPFAM
SSF47986   SSF47986       

Ontologies

Topology

SignalP
Position:   1 - 17,         Likelihood:  0.677317
 
 
Length:
231
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
22.94918
Exp number, first 60 AAs:
0.515099999999999
Total prob of N-in:
0.03098
outside
1  -  158
TMhelix
159  -  181
inside
182  -  231
 
 

Population Genetic Test Statistics

Pi
317.532028
Theta
215.038516
Tajima's D
1.494658
CLR
0
CSRT
0.784960751962402
Interpretation
Uncertain
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