SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03875  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA010171
Annotation
PREDICTED:_activating_signal_cointegrator_1_complex_subunit_3_isoform_X1_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.692
 

Sequence

CDS
ATGATAGAACTTCCTCGCATTACACGAGCCTTAAGGGCTCACACACAGCTTGATAAACCTCGATGCTTGAAACCTCCAAATGATGAAGCAAACTTAATATTATTAACAAAAAATTTACAAAGATTCAAATCATTCAGCGATATATCCACATACGTACAACATAATGAACCCAATACAGCTGAGCTACTGAATCTACTGAGACAACTAAAAGATGCATGCAAACTACTCACGGGTGATCAGCCAGACGATATCATTGAGGACGCTGCAGTGCTAACATTGAGAATGTTTCTTGATCAAGACATAGTCATGCTTAAACATCTTTCACAGTTGAGGCAAACATTTGGATCTGCCGCATCCACTACTGTTAATAAAATTTGTGAGATAGTAAATCAAATATCAAATGATATATCTGAAGACACAAAAGAATACATTAGATCGGAAACAAATGGAACAGATAAAGACAATTTTAAAATTTGGGGAGAAAATATCCAATGTTATTACATTCCGTATAAACCTCCAAAAAGAGTATTAAGCAAATTAACAAAGAAACCGGCTACAGCAAGTGCCTTTGTAGAAGATTTCTCAATGAAATACAACAAGGAAAATGTTAAAGTTAATGGTTTTCAATCACAGAGTACAACCAGGAAGACAGAACAAGAACCTAAGTTCGGGAAAACATGGCTAGAAACCAAAGTAAAGGCACTATATGAAAATGAATTAGGAATGTCAAGTGCAGATATATTACAATCTATGATAACATTCCTGAATTCTCCAAGAAGTAATGATGAGCTGCAGAACGACCTCTTCGAACTATTGGGCTTTGATAAATTTGAGTTTATACAAGAGACACTCGAACATAGGCGGGACATTATAAATAGCCTAAAGACACCCACACCACAGCCTAGCATAACAGAAATTGCAGCTATTTTACCTGAAAACAAAATGCCACAGTATCTTTGTCAAGTATCTGTGCTTTCTGAACAAGAGAAGATGCTTGCCAAATTGGTACGGAAGGAAGAAAAGAAGGCCAAGAATTCTAGGAAAAATGACAATGATGATGATGATGATCAGGAAATTAATATATCACAATTAAGAGCAAAGAGAATAGCAGAACTATCAAAGCCGGTTGTTCCGTTTTCGGCATCGTCGCGATTGTCCAACACCGACCCGATTCTACAGAGGATATCGTACTTTCAAACTAAAGTCCAATACCCGAACGTGTACGACTCTTCGATTGATGCAAAAAATGCGGCAGGTTTCGTGTCCGGTTTAAAACTAATACTCCCCGAGAACGCCGCGAGGAAAGATCTCAAAGAATATGAAGAAGTCACAATACCGAAGAACGATCCGCCTCCATTAGAGATCGGAAACAAACGAATTCCTATATCCGCCATGGACGAGATTGGTCAAATGGCATTTGAAAACATAAAAGAGCTGAATCGTATACAGTCGGTGGTGTTCCAAACGGCCTACAATACTAATGAGAATCTCCTTATATGCGCACCGACCGGCGCCGGTAAAACTAACATCGCTCTACTGACGGTTGTCCATCAAATAAAGCAGCACATCGAGAATAGTGTTATTATGAAAAATAAATTCAAGATTATCTACATAGCTCCAATGAAAGCTCTTGCTTCAGAAATGACAGCTAGCTTCGGCAAACGACTCAAAGGTCTAGGCATTCTGGTCCGCGAACTGACGGGCGACATGAAGTTGACCAAGAGTGAAGTACAGCAGACTCAGATGATCGTCACCACGCCCGAGAAATGGGACGTCGTCACACGGAAGGGAGCCACTGACACAGAGCTGGCGTCAATAGTAAAGCTGATAATCATCGATGAGGTGCATCTCTTACACGGCGACAGGGGACCGATAGTGGAAGCCATTGTCGCCAGGACATTACGACAAGTCGAATCGACTCAGAACATGATACGAATCGTTGGATTGTCTGCTACATTACCTAATTACCTCGATGTTGCCAGGTTCTTGAGAGTTAATCCGTATATCGGATTATTCTTCTTCGACTCTCGATTCAGGCCCGTACCATTGGAACAACAGTTTATTGGTGTTAAAGAAGTCGGTAGTGGTGGAGGCGCTCATCTGCGTCAGATGCAAATAATGAATGAGGTGTGCTACGATAAAGCCGTCGAAATGGTGCAAAAAGGACATCAAGTGATGGTGTTCGTGCACGCTAGGAACGCGACTCACCAAACTGCGCTGATATTGAAGGAACTGGCACAGAAGAAGGGTCATTTGAAACATTTCGAACCGGAAGACACGGGGGGCTTCCTCAAAGCCAAGAAGTCCATAAGTAGCAGCCCTAACAGACAACTGGGGGAGTTGTTTGCGAGCGGGTTCGCTTGTCATCACGCCGGAATGTTGAGAAGCGATAGGAACATGGTGGAGAAATATTTCGCCGAAGGATACATTAGGGTATTAGTTTGCACGTCGACGTTAGCTTGGGGTGTCAATTTACCAGCGCACGCTGTTATTATAAGGGGCACTGAGATCTACGATCAAAGCCACGGCACATTCGTGGACCTAAGCATACTGGATGTGCTACAAATATTCGGTAGGGCCGGCCGGCCGCAGTTCGACACGTCCGGTACCGGAATCATAATAACTACGCACGACAAACTTACCCACTACCTCAAGTCGATGACGAACCAGTTCCCCATCGAGAGCAACTTCATCAATTTGCTGGCCGATAACCTCAATGCTGAGGTGGCGCTCGGCACTGTGACAAACATCGATGAAGCCGTTGAATGGTTGAGCTATACGTACTTGTTCGTGAGAATGAGAATAAATCCCCAGGTTTACGGCTTAACCTACAGCGACGTGCAAGAGGAACCGATGCTGGAGACTAAACGTCGCGAACTAATCACTGCGGCCGCCATGCAGCTAGACAAGACCCACATGATCAGGTTCAACGAACGCACCGGGGATTTGAACGTCACCGATCTCGGTCGCACGGCGAGTCACTACTACATAACGTGTGAAACCATGGAGGTGTTCAACTCTATGGTGCGGAAGTCGATGACGCAGGGGTACGTGCTGGAGATGCTGACGAGGTGCTCCGACTTCCAACAGCTTAAAGTTAGAAAAGAAGAGTTGACAGAACTATGGCAACTCAAAGATAAATACTGCGAATTGCGTATAGAAGATCCACCGGAGGACATACATTGGAAGATCAATATACTGTTGCAAACTTATCTATCGAGAGGACGCATCAATGGTTCGTCTTTGCAGTCAGATCTCAATTATATCAGTCAGAACGCCGTCCGAATAATACGGGCGCTCTTCGAAATAACTCTACGCAAGAACAATGCGTACATGGCCGGCTTGTATCTGAAGATGGCGAAAATGCTCGAGCTTCAACAGTGGGACTTCTACAGCGACATGAGACAGTTCAACTGCTTCACGAACGAGACCTTAAAGTACATCGAGTACCCGATGCTGAAGCCGGATCAGATCAGGGATATGGATTGGAAAGAGTTAGGAGATCTAATAAGGAACCCAAAGAACGCACGTCACATGAAAAAATGCGCCGACGAATTTCCGTTACTTGAAATGGAAGCGACTCTGCATCCGATAACGAGAACAGTGTTAAGGATACGTCTCACGATCACGCCCAACTTCAAATGGAACGACAAGTACCACGGCAAAGCCCCTGAGGCCTTCTGGATATGGGTTGAGGATCCCGAAAGCGACATCATGTATTACCACGAATATTTTCTCATCACCAAGAAACAGGTAATCATGAACGAGCCACAAGAGTTGATTATAACGATTCCAATTCAAGAACCTTTGCCGCCGCAGTACTACATCAGAGCTACGTCAGAAAGATGGGTCGGCTCAGAGAGCGTGCTGCCGCTGACGTTCCAACATTTGATCCTACCTGAAACTCATCCACCTCACACGGACCTGTTGGAACTGCAACCGTTACCGGTGACGGCTTTGAACAACCCATCGTACGAGATGCTATACAACTTCACGCATTTCAATCCGATACAGACGCAAATATTTCACTGTTTATACCACACCGACAACAACGTGCTGCTGGGCGCGCCGACCGGCTCGGGCAAGACCATCGTGGCCGAGATAGCCATGTTCAGGGTGTTCAACCAGTACCCTGGCTGTAAGGTGGTATATATAGCGCCCTTAAAGGCTCTCGTCAAAGAAAGAATAAAAGATTGGAAGGTGCGTCTCGAAGAAAAAATGAACAAGAAAGTTGTAGAGCTGACAGGCGACGTGACCCCGGACATCAGAGCTGTAAAGAGTTCGCACGTCATCGTGACTACTCCGGAAAAATGGGACGGGATCAGTCGGTCGTGGCAGACGAGGAACTACGTGAAAGATGTAGCCCTCATTGTTATAGACGAGATACATCTCCTGGGAGAGGACAGAGGACCCGTACTTGAAGTCATCGTATCCAGAACGAATTTCATCCAGTCCCACACTTCGCGTCGATTACGCATCATCGGCCTGTCGACTGCGCTGGCCAACGCCAAGGACCTCGCCAACTGGCTCAATATCGGAGAGATGGGCTTGTATAATTTTAGGCCATCAGTGCGACCAGTTCCTTTGGAGGTGCACATATCGGGGCACCCGGGCCGGCATTACTGTCCGCGAATGATGACCATGAACAAGCCGACGTTCCAAGCTATACGCACGCACTCGCCGGCCGCGCCCGCACTCGTGTTCGTGTCCAGTCGACGCCAGACAAGATTAACAGCGCTCGACTTAATCGCGTATCTGGCAGCCGAAGAAAACCCCAAACAGTGGCTCCATATGCAAGAGTCCGAAATGGAACAAATCCTATCGAACATTCGAGAATCGAACCTGAAACTCACCTTAGCCTTCGGTATCGGTATACACCACGCCGGCTTGCACGAAAGGGATCGAAATACTGTTGAAGAGCTTTTCATTAATCAAAAAATACAGGTTTTGATTTGCACTGCCACGCTCGCCTGGGGCGTGAACTTTCCCGCGCATTTGGTCGTCATCAAGGGCACGGAGTACTACGACGGAAAACAGAAGCGTTACGTCGACATGCCGATCACCGACGTGCTGCAGATGATGGGCCGGGCGGGGCGGCCGCAGTTCGACAACGAAGGCGTCGCCGTCGTACTAGTTCACGACCAGAAGAAGAACTTCTATAAGAAGTTCCTATACGAACCGTTCCCGGTCGAATCGAGTCTGCTCGAAGTGTTGGCGGATCATCTGAACGCTGAGATCGTCGCCGGCACGGTGCAAACAAAACAAGACATCCTAGATTATTTGACGTGGACCTATTTCTTCCGGAGGTTACTAAAAAATCCCTCGTATTACAATTTGGAGAGCTTGGAGCCGCAAGACGTGAACCATTTCCTGTCGGGTCTCGTCCAAACTTCACTGGACGCTTTATGCGCGGCCTTTTGCGTGGAAATCGAAGAGGATGAACGTACAGTCCACAGCACGTGGATGGGTCGTATCGCGTCGTATTACTATCTGTCGCACAGGACAATGGCTCATTTCTCAAAGAATCTAAACGGTAATATGAACGTGGATGATCTGCTACGGGTATTGTCGGATTCTGAAGAATACGCTACTCTACCAGTTCGACATAACGAGGATCTGCTTAACGGGGAGCTATCGCAGCAATGTCGTTTGCCCGTCGACGCTCTGTCCCTGGACTCATCAAACGTCAAAGCGTTCCTGTTACTGCAGGCGCACATGACCCGGATAACTTTACCGAACTCGGATTATTTGACGGACACGAAATCTGTTTTAGATCAAACGATCAGGATTTTACAGGCAATGATAGATACATCAGCAGAGAACGGCTGGCTGTCCGTTTGTCTGTCATGCCAGACGTTGATGCAGTGCATTATACAGGCGCGATGGCCGTCAGACTCTCCCTTGACCACCCTCCCGCACATCGAATCCCAACATCTATACTTGTTCTTACATTTAACTAAAGACAGTAAGAAGCCTTGCATGATGCTTAACGGTCTGAAAGTTAGCTGCATGCGAAACTACGAGTTACTTGCTAAGTATTTGAGGAAAGAGTTCGAAGAGAATCAGATTCAACAGATACACAGGGCGATATGCGACCTACCAACTACGGACATAAAGTTGCACGTCCGCGGTCTATGGTTCGACGCTGATCATGAACAAGACAAACGGATCACGCAACCTCCCGCCCGGGATCAGTGGATGCCTTTGCATGCTGATCAGGAATATACCCTGCTATTGGATATGCAACGTAGAGGCGGCAATCCGAACAACGTGCTATGTCCGAGGTTCCCGCGCGGCAAGAACGAGGGCTGGTTCGTGACGCTCGGCACCGTGGACGATGGAGAGTTGCACGCCTTGAAACGGGTCCCGCCTAGAGGAACGGCACAGCTTACATTCTATACTCCTTCTCGGACTGGGCGTATAATATATACTGTATATATTATGAGTGACAGCTACATGGGCTTAGACCAACAATACGATTTACAATTTGAAATAATAGATGCAATGCCGTCTGAAAACGTAGATAAAGTGTATGACACTATTGAGAAAACATTAATCGAATGA
Protein
MIELPRITRALRAHTQLDKPRCLKPPNDEANLILLTKNLQRFKSFSDISTYVQHNEPNTAELLNLLRQLKDACKLLTGDQPDDIIEDAAVLTLRMFLDQDIVMLKHLSQLRQTFGSAASTTVNKICEIVNQISNDISEDTKEYIRSETNGTDKDNFKIWGENIQCYYIPYKPPKRVLSKLTKKPATASAFVEDFSMKYNKENVKVNGFQSQSTTRKTEQEPKFGKTWLETKVKALYENELGMSSADILQSMITFLNSPRSNDELQNDLFELLGFDKFEFIQETLEHRRDIINSLKTPTPQPSITEIAAILPENKMPQYLCQVSVLSEQEKMLAKLVRKEEKKAKNSRKNDNDDDDDQEINISQLRAKRIAELSKPVVPFSASSRLSNTDPILQRISYFQTKVQYPNVYDSSIDAKNAAGFVSGLKLILPENAARKDLKEYEEVTIPKNDPPPLEIGNKRIPISAMDEIGQMAFENIKELNRIQSVVFQTAYNTNENLLICAPTGAGKTNIALLTVVHQIKQHIENSVIMKNKFKIIYIAPMKALASEMTASFGKRLKGLGILVRELTGDMKLTKSEVQQTQMIVTTPEKWDVVTRKGATDTELASIVKLIIIDEVHLLHGDRGPIVEAIVARTLRQVESTQNMIRIVGLSATLPNYLDVARFLRVNPYIGLFFFDSRFRPVPLEQQFIGVKEVGSGGGAHLRQMQIMNEVCYDKAVEMVQKGHQVMVFVHARNATHQTALILKELAQKKGHLKHFEPEDTGGFLKAKKSISSSPNRQLGELFASGFACHHAGMLRSDRNMVEKYFAEGYIRVLVCTSTLAWGVNLPAHAVIIRGTEIYDQSHGTFVDLSILDVLQIFGRAGRPQFDTSGTGIIITTHDKLTHYLKSMTNQFPIESNFINLLADNLNAEVALGTVTNIDEAVEWLSYTYLFVRMRINPQVYGLTYSDVQEEPMLETKRRELITAAAMQLDKTHMIRFNERTGDLNVTDLGRTASHYYITCETMEVFNSMVRKSMTQGYVLEMLTRCSDFQQLKVRKEELTELWQLKDKYCELRIEDPPEDIHWKINILLQTYLSRGRINGSSLQSDLNYISQNAVRIIRALFEITLRKNNAYMAGLYLKMAKMLELQQWDFYSDMRQFNCFTNETLKYIEYPMLKPDQIRDMDWKELGDLIRNPKNARHMKKCADEFPLLEMEATLHPITRTVLRIRLTITPNFKWNDKYHGKAPEAFWIWVEDPESDIMYYHEYFLITKKQVIMNEPQELIITIPIQEPLPPQYYIRATSERWVGSESVLPLTFQHLILPETHPPHTDLLELQPLPVTALNNPSYEMLYNFTHFNPIQTQIFHCLYHTDNNVLLGAPTGSGKTIVAEIAMFRVFNQYPGCKVVYIAPLKALVKERIKDWKVRLEEKMNKKVVELTGDVTPDIRAVKSSHVIVTTPEKWDGISRSWQTRNYVKDVALIVIDEIHLLGEDRGPVLEVIVSRTNFIQSHTSRRLRIIGLSTALANAKDLANWLNIGEMGLYNFRPSVRPVPLEVHISGHPGRHYCPRMMTMNKPTFQAIRTHSPAAPALVFVSSRRQTRLTALDLIAYLAAEENPKQWLHMQESEMEQILSNIRESNLKLTLAFGIGIHHAGLHERDRNTVEELFINQKIQVLICTATLAWGVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQKKNFYKKFLYEPFPVESSLLEVLADHLNAEIVAGTVQTKQDILDYLTWTYFFRRLLKNPSYYNLESLEPQDVNHFLSGLVQTSLDALCAAFCVEIEEDERTVHSTWMGRIASYYYLSHRTMAHFSKNLNGNMNVDDLLRVLSDSEEYATLPVRHNEDLLNGELSQQCRLPVDALSLDSSNVKAFLLLQAHMTRITLPNSDYLTDTKSVLDQTIRILQAMIDTSAENGWLSVCLSCQTLMQCIIQARWPSDSPLTTLPHIESQHLYLFLHLTKDSKKPCMMLNGLKVSCMRNYELLAKYLRKEFEENQIQQIHRAICDLPTTDIKLHVRGLWFDADHEQDKRITQPPARDQWMPLHADQEYTLLLDMQRRGGNPNNVLCPRFPRGKNEGWFVTLGTVDDGELHALKRVPPRGTAQLTFYTPSRTGRIIYTVYIMSDSYMGLDQQYDLQFEIIDAMPSENVDKVYDTIEKTLIE

Summary

EMBL
BABH01011400    BABH01011401    BABH01011402    NWSH01000216    PCG78294.1    ODYU01002831    + More
SOQ40801.1    NEVH01009765    PNF32846.1    FX985825    BBA93712.1    KK852498    KDR22605.1    AAAB01008987    EAA01788.6    APCN01000826    GDUN01000823    JAN95096.1    AXCM01002705    JXUM01089761    JXUM01089762    JXUM01089763    JXUM01089764    KQ563796    KXJ73287.1    ATLV01019085    KE525262    KFB43587.1    GFDL01011263    JAV23782.1    AJWK01002957    AXCN02001502    ADMH02002101    ETN59142.1    GECU01014574    JAS93132.1    DS231968    EDS29663.1    GEBQ01021673    JAT18304.1    UFQS01001247    UFQT01001247    SSX09907.1    SSX29630.1    UFQS01001461    UFQT01001461    SSX11094.1    SSX30665.1    GEDC01007299    GEDC01006465    JAS29999.1    JAS30833.1    AJWK01008351    DS235824    EEB17898.1    AAZX01000449    GDHC01021820    JAP96808.1    NNAY01001281    OXU24504.1    GEDC01015126    JAS22172.1    GFTR01008904    JAW07522.1    ACPB03006763    KK855108    PTY20897.1    PYGN01000264    PSN49726.1    GL444953    EFN60404.1    AMQN01003521    KB312025    ELT88015.1    QOIP01000013    RLU15451.1    GAMC01021415    JAB85140.1    GBXI01017339    JAC96952.1    GDHF01027459    JAI24855.1    GL451577    EFN78973.1    CH902617    EDV43079.1    KPU80062.1    CH954181    EDV49029.1    KZ288511    PBC25114.1    CH940650    EDW67809.1    CH480815    EDW42033.1    KQ982431    KYQ56449.1    KK107234    EZA54919.1    AE014297    AAF55204.2    LBMM01001505    KMQ96180.1    CM000160    EDW97436.1    KQ981268    KYN43882.1    CH964232    EDW80628.1    CH916369    EDV93019.1    CH933806    EDW14615.1    OUUW01000007    SPP82983.1    KQ980284    KYN16947.1    CCAG010010575    CM000364    EDX12805.1    GDIP01022754    JAM80961.1    GDIQ01181036    GDIQ01062933    JAK70689.1    SPP82982.1    GDIQ01179638    JAK72087.1    GDIQ01127311    JAL24415.1    GDIQ01252118    JAJ99606.1    ADTU01002769    GDIQ01245120    JAK06605.1    GL888112    EGI67241.1    KQ976693    KYM77654.1    CM000070    EAL27267.2    KRS99893.1    KB201931    ESO93256.1    CH479179    EDW23748.1    ABLF02025860    KQ978344    KYM94799.1    GDIQ01006863    JAN87874.1    GDIQ01064035    JAN30702.1    GDIQ01132609    JAL19117.1    AGTO01001147    GL732602    EFX72172.1    HADW01005380    SBP06780.1   
Pfam
PF02889   Sec63        + More
PF00270   DEAD
PF00271   Helicase_C
PF18149   Helicase_PWI
Interpro
IPR011545   DEAD/DEAH_box_helicase_dom        + More
IPR035892   C2_domain_sf       
IPR003593   AAA+_ATPase       
IPR001650   Helicase_C       
IPR036390   WH_DNA-bd_sf       
IPR041094   Brr2_helicase_PWI       
IPR014001   Helicase_ATP-bd       
IPR004179   Sec63-dom       
IPR027417   P-loop_NTPase       
IPR014756   Ig_E-set       
SUPFAM
SSF46785   SSF46785        + More
SSF81296   SSF81296       
SSF52540   SSF52540       
Gene 3D
PDB
6QX9     E-value=0,     Score=3793

Ontologies

Topology

Length:
2187
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.02823
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00006
outside
1  -  2187
 
 

Population Genetic Test Statistics

Pi
231.997036
Theta
176.46764
Tajima's D
1.710597
CLR
0.350805
CSRT
0.830158492075396
Interpretation
Uncertain
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