SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03873  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA010199
Annotation
PREDICTED:_peptidyl-prolyl_cis-trans_isomerase_FKBP2_[Amyelois_transitella]
Full name
Peptidylprolyl isomerase      
Location in the cell
Cytoplasmic   Reliability : 1.419 Mitochondrial   Reliability : 1.465 Nuclear   Reliability : 1.128
 

Sequence

CDS
ATGTTTAAGTTAGTGGTAATAGAAAGTACAGCTTCAAAGAAACTACAAATTGGCATTAAGAAAAGACCTGAGGACTGTTCCATCAAGAGCCGCAAAGGAGATCTTTTGCATATGCACTACACTGGCACTTTAGATGACGGTACAGAATTTGATAGTTCAATTCCTCGAGGTAACCCCTTAACCTTCAAACTTGGTTCTGGTCAAGTTATTAAGGGTTGGGATCAAGGGCTACTTGGAATGTGCGAAGGAGAACAACGTAAACTTGTCATTCCACCGGAATTGGCTTATGGTTCAGCTGGAGCACCACCAAAGATACCAAAGTCTGCTACTCTTACTTTTCACGTAGAATTGGTGAAAATTGAAAGAAAAGATGAATTATAA
Protein
MFKLVVIESTASKKLQIGIKKRPEDCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLLGMCEGEQRKLVIPPELAYGSAGAPPKIPKSATLTFHVELVKIERKDEL

Summary

Catalytic Activity
[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)
Feature
chain  Peptidylprolyl isomerase
EC Number
5.2.1.8
EMBL
BABH01011400    KZ149914    PZC78018.1    ODYU01012499    SOQ58844.1    NWSH01000216    + More
PCG78299.1    AK401745    BAM18367.1    KQ459582    KPI98761.1    AGBW02008814    OWR52502.1    KQ460075    KPJ17913.1    GAIX01003651    JAA88909.1    GDIQ01053084    JAN41653.1    GDIP01031032    JAM72683.1    GL732524    EFX89578.1    LRGB01003101    KZS04687.1    GDIP01144462    JAJ78940.1    GDIP01083869    JAM19846.1    DS235824    EEB17879.1    GGLE01005406    MBY09532.1    GFJQ02007504    JAV99465.1    GEIB01000778    JAR87222.1    BC043844    BC108494    CM004472    AAH43844.1    AAI08495.1    OCT84072.1    AXCN02000238    GBBL01002247    JAC25073.1    AMQM01005587    KB097026    ESN99916.1    JTDY01002505    KOB71271.1    GBBK01001997    JAC22485.1    APCN01002118    GFTR01002404    JAW14022.1    ACPB03009369    GBYX01226753    GBYX01226752    JAO69916.1    AAAB01008879    EAA08436.4    GFWV01022735    MAA47462.1    ABJB010135641    ABJB010331434    ABJB010475883    ABJB010831436    ABJB010896591    DS640514    EEC01827.1    GU588366    ADO28322.1    GEDC01028614    JAS08684.1    AMQN01001773    KB305378    ELU01137.1    GU588500    ADO28456.1    GEDV01004526    JAP84031.1    GACK01007836    JAA57198.1    GBBM01000373    GBBM01000372    JAC35046.1    HAEI01012218    SBS14687.1    HAED01003501    HAEE01012393    SBR32443.1    HADY01018677    HAEJ01006064    SBS46521.1    GEMB01006383    JAR96955.1    HAEH01018586    SBS07915.1    HADZ01012970    SBP76911.1    GBZX01000578    JAG92162.1    GFAC01006045    JAT93143.1    GBXM01003866    JAI04712.1    HAEB01016753    HAEC01007129    SBQ63280.1    BX465183    BC155099    AAI55100.1    BC072927    CM004473    AAH72927.1    OCT81721.1    KK852771    KDR16890.1    AAMC01101476    BC157195    BC171197    BC171199    AAI57196.1    AAI71197.1    HAEF01021175    HAEG01014026    SBR96508.1    ATLV01026773    KE525419    KFB53335.1    HAEA01007127    SBQ35607.1    RJVU01035392    ROL47689.1    AYCK01020911    GECZ01010437    JAS59332.1    GFPF01007814    MAA18960.1    GECU01010643    JAS97063.1    GADI01005988    JAA67820.1    GAMT01007049    GAMT01007048    GAMQ01002057    GAMQ01002056    GAMP01006262    GAMP01006261    JAB04812.1    JAB39794.1    JAB46493.1    CH477505    EAT39857.1    BT075643    ACO10067.1    GAMS01007383    GAMS01007382    GAMS01007381    JAB15754.1    AERX01028214    AERX01028215    JARO02000244    KPP79274.1    KK114963    KFM63793.1    AXCP01008524    GGFM01004905    MBW25656.1    GAAZ01001854    JAA96089.1    JW880688    AFP13205.1    JW880938    AFP13455.1    HADW01004265    HADX01014985    SBP37217.1   
Pfam
PF00254   FKBP_C
Interpro
IPR001179   PPIase_FKBP_dom       
PDB
4NNR     E-value=9.55282e-46,     Score=455

Ontologies

Topology

Length:
126
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
5e-05
Exp number, first 60 AAs:
0
Total prob of N-in:
0.10926
outside
1  -  126
 
 

Population Genetic Test Statistics

Pi
254.360535
Theta
180.2265
Tajima's D
1.290839
CLR
0
CSRT
0.734813259337033
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
28556443 LVIPPELAYGSAGAPPK 100.00 2e-05
28556443 LVIPPELAYGSAGAPPK 100.00 2e-05
28556443 QNPETLCIGQENFLR 100.00 2e-05
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