Gene

KWMTBOMO03869  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010197

Annotation

PREDICTED:_short_coiled-coil_protein_homolog_[Papilio_polytes]

Location

Bomo_Chr7(+):5351889-5352777      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.175

CDS

ATGTCCGTTATAATGCAGAAATGTGGTGATGATAATATACCTCTTGCAGATGACGACCCTCAAGTCATCATTTCCGATGACACGGATAACAACCGTTTAGATCATGGTCGTTCGATGGACTCATTACCCAGTTCTTACACTGCTGGATCTTCAAGCCCTGGCTTAAACGGACCAGCTAGTTTTGAACCTGATTCCGGCATAGATGAGCAAGAGGAAAAGGCTCGTTTGATATCACAAGTTTTGGAGCTTCAAAATACTCTGGATGACCTTTCACAAAGAGTTGACTCTGTTAAAGAAGAAAACCTAAAACTCCGCTCCGAGAATCAAGTTCTCGGTCAATATATAGAAAATCTCATGTCGGCATCATCAGTATTTCAATCCACTACTCCCAATATACAAAAGAAGTGA

Protein

MSVIMQKCGDDNIPLADDDPQVIISDDTDNNRLDHGRSMDSLPSSYTAGSSSPGLNGPASFEPDSGIDEQEEKARLISQVLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENLMSASSVFQSTTPNIQKK

Uniprot

H9JKZ6   S4PXK0   A0A3S2LTA3   A0A194Q5T8   A0A1E1WH64   A0A212FFJ1   + More
A0A2H1WY60   A0A2W1BSG2   A0A2A4K4B8   A0A0L7KUN1   A0A067RCL3   D7EII5   A0A1Y1M9P2   A0A0K8TNS4   R4WRI2   A0A224XZK2   A0A0P4VS68   R4G849   J3JU93   E0W1C6   A0A1B6C8T3   A0A0A9VTK3   A0A195E5R6   F4W9Z2   A0A0A9W2F5   A0A1W4XAI2   A0A034VGK8   A0A0K8VR73   A0A1B6MRB1   A0A0A1WNH3   A0A026WRB0   A0A0L0CHZ0   A0A151HYK8   A0A158NR42   A0A182K7S3   A0A0L7QRC3   A0A151ILW5   A0A1L8EDN9   A0A154P9M7   A0A1B6HPT1   A0A1I8PFZ1   A0A1B6FGC6   W8B725   A0A2S2Q095   A0A0J7L642   A0A182ME14   A0A182PRQ8   A0A182QNT3   W5J8K2   A0A182VVW0   A0A182FRN3   A0A182RA37   U5EGH2   T1IQD3   T1PGF2   A0A2H8TN14   A0A310S530   A0A2J7R1N6   A0A151JWG4   A0A2A3ELN6   V9IJG7   A0A088AK63   A0A182TFC5   A0A182X9I2   Q7PX88   A0A182HKG5   A0A084W0M4   A0A182IK87   V5I7A6   E9IPP4   J9JLL5   A0A182URT8   A0A182L8P9   A0A1B0G6R5   A0A1A9UTP1   A0A1A9ZTB8   A0A1B0B3S5   A0A1A9YK27   Q17D62   A0A023EDY1   A0A1W4UR88   A0A0K8T6F9   T1DRA7   A0A224Y8N3   L7M3M5   A0A131YIE3   A0A131XBM5   A0A1Q3F5J6   B4NT73   B4PRS5   B4IC74   B3P629   Q9VB51   K7ISK8   A0A1E1XQ16   F0J9V3   A0A0C9QZM7   B0X1C6   B4K781  

Pubmed

19121390    23622113    26354079    22118469    28756777    26227816    + More
24845553    18362917    19820115    28004739    26369729    23691247    27129103    22516182    23537049    20566863    25401762    26823975    21719571    25348373    25830018    24508170    30249741    26108605    21347285    24495485    20920257    23761445    25315136    12364791    14747013    17210077    24438588    21282665    20966253    17510324    24945155    26483478    28797301    25576852    26830274    28049606    17994087    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    20075255    29209593    21362191    26131772   

EMBL

BABH01011399    GAIX01004903    JAA87657.1    RSAL01000013    RVE53370.1    KQ459582    + More
KPI98765.1    GDQN01004808    JAT86246.1    AGBW02008814    OWR52498.1    ODYU01011965    SOQ58010.1    KZ149914    PZC78022.1    NWSH01000174    PCG78753.1    PCG78754.1    JTDY01005451    KOB66987.1    KK852790    KDR16503.1    DS497681    EFA12034.1    GEZM01039645    JAV81300.1    GDAI01001561    JAI16042.1    AK417297    BAN20512.1    GFTR01002366    JAW14060.1    GDKW01001826    JAI54769.1    ACPB03017123    GAHY01001592    JAA75918.1    APGK01047102    BT126806    KB741077    KB632384    AEE61768.1    ENN74130.1    ERL94261.1    DS235869    EEB19432.1    GEDC01027381    JAS09917.1    GBHO01044545    GDHC01021505    JAF99058.1    JAP97123.1    KQ979608    KYN20508.1    GL888035    EGI68982.1    GBHO01044544    GDHC01001300    JAF99059.1    JAQ17329.1    GAKP01017745    JAC41207.1    GDHF01010935    GDHF01007070    GDHF01002034    JAI41379.1    JAI45244.1    JAI50280.1    GEBQ01001529    JAT38448.1    GBXI01013925    JAD00367.1    KK107144    QOIP01000003    EZA57609.1    RLU24319.1    JRES01000378    KNC31827.1    KQ976717    KYM76783.1    ADTU01023801    ADTU01023802    KQ414782    KOC61185.1    KQ977085    KYN05881.1    GFDG01001968    JAV16831.1    KQ434849    KZC08527.1    GECU01031045    GECU01022510    GECU01019250    JAS76661.1    JAS85196.1    JAS88456.1    GECZ01020513    JAS49256.1    GAMC01009590    JAB96965.1    GGMS01001898    MBY71101.1    LBMM01000401    KMQ98442.1    AXCM01000480    AXCN02001512    ADMH02002066    ETN59713.1    GANO01003442    JAB56429.1    JH431303    KA647882    AFP62511.1    GFXV01002873    MBW14678.1    KQ772519    OAD52447.1    NEVH01008204    PNF34749.1    KQ981650    KYN38645.1    KZ288224    PBC31941.1    JR050206    AEY61200.1    AAAB01008987    EAA01728.5    APCN01000828    ATLV01019123    KE525262    KFB43768.1    AXCP01002654    GALX01006770    JAB61696.1    GL764558    EFZ17457.1    ABLF02033604    CCAG010013859    JXJN01008014    CH477299    EAT44308.1    JXUM01033474    GAPW01005785    KQ560989    JAC07813.1    KXJ80110.1    GBRD01005056    JAG60765.1    GAMD01000710    JAB00881.1    GFPF01000763    MAA11909.1    GACK01006414    JAA58620.1    GEDV01009528    JAP79029.1    GEFH01005076    JAP63505.1    GFDL01012213    JAV22832.1    CH982788    EDX15763.1    CM000160    EDW98518.1    CH480828    EDW45232.1    CH954182    EDV53429.1    AE014297    AY084197    KX531576    AAF56692.1    AAL89935.1    ANY27386.1    GFAA01002056    JAU01379.1    BK007654    DAA34627.1    GBZX01002540    JAG90200.1    DS232258    EDS38575.1    CH933806    EDW16394.1   

Proteomes

UP000005204    UP000283053    UP000053268    UP000007151    UP000218220    UP000037510    + More
UP000027135    UP000007266    UP000015103    UP000019118    UP000030742    UP000009046    UP000078492    UP000007755    UP000192223    UP000053097    UP000279307    UP000037069    UP000078540    UP000005205    UP000075881    UP000053825    UP000078542    UP000076502    UP000095300    UP000036403    UP000075883    UP000075885    UP000075886    UP000000673    UP000075920    UP000069272    UP000075900    UP000095301    UP000235965    UP000078541    UP000242457    UP000005203    UP000075902    UP000076407    UP000007062    UP000075840    UP000030765    UP000075880    UP000007819    UP000075903    UP000075882    UP000092444    UP000078200    UP000092445    UP000092460    UP000092443    UP000008820    UP000069940    UP000249989    UP000192221    UP000000304    UP000002282    UP000001292    UP000008711    UP000000803    UP000002358    UP000002320    UP000009192   

PRIDE

H9JKZ6    Q9VB51   

Pfam

PF10224   DUF2205

Interpro

IPR019357   SCOC       

ProteinModelPortal

H9JKZ6   S4PXK0   A0A3S2LTA3   A0A194Q5T8   A0A1E1WH64   A0A212FFJ1   + More
A0A2H1WY60   A0A2W1BSG2   A0A2A4K4B8   A0A0L7KUN1   A0A067RCL3   D7EII5   A0A1Y1M9P2   A0A0K8TNS4   R4WRI2   A0A224XZK2   A0A0P4VS68   R4G849   J3JU93   E0W1C6   A0A1B6C8T3   A0A0A9VTK3   A0A195E5R6   F4W9Z2   A0A0A9W2F5   A0A1W4XAI2   A0A034VGK8   A0A0K8VR73   A0A1B6MRB1   A0A0A1WNH3   A0A026WRB0   A0A0L0CHZ0   A0A151HYK8   A0A158NR42   A0A182K7S3   A0A0L7QRC3   A0A151ILW5   A0A1L8EDN9   A0A154P9M7   A0A1B6HPT1   A0A1I8PFZ1   A0A1B6FGC6   W8B725   A0A2S2Q095   A0A0J7L642   A0A182ME14   A0A182PRQ8   A0A182QNT3   W5J8K2   A0A182VVW0   A0A182FRN3   A0A182RA37   U5EGH2   T1IQD3   T1PGF2   A0A2H8TN14   A0A310S530   A0A2J7R1N6   A0A151JWG4   A0A2A3ELN6   V9IJG7   A0A088AK63   A0A182TFC5   A0A182X9I2   Q7PX88   A0A182HKG5   A0A084W0M4   A0A182IK87   V5I7A6   E9IPP4   J9JLL5   A0A182URT8   A0A182L8P9   A0A1B0G6R5   A0A1A9UTP1   A0A1A9ZTB8   A0A1B0B3S5   A0A1A9YK27   Q17D62   A0A023EDY1   A0A1W4UR88   A0A0K8T6F9   T1DRA7   A0A224Y8N3   L7M3M5   A0A131YIE3   A0A131XBM5   A0A1Q3F5J6   B4NT73   B4PRS5   B4IC74   B3P629   Q9VB51   K7ISK8   A0A1E1XQ16   F0J9V3   A0A0C9QZM7   B0X1C6   B4K781  

PDB

4BWD     E-value=4.89646e-17,     Score=208

KEGG

101736585    K20316 short coiled-coil protein | (RefSeq) short coiled-coil protein homolog

GO

PANTHER

PTHR21614  

Length:

135

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00175

Exp number, first 60 AAs:

0

Total prob of N-in:

0.32913

outside

1  -  135

 

 

Pi

280.555134

Theta

203.482736

Tajima's D

1.242236

CLR

0.012948

CSRT

0.72026398680066

Interpretation

Uncertain