SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03868  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA010173
Annotation
PREDICTED:_39S_ribosomal_protein_L19?_mitochondrial_[Plutella_xylostella]
Full name
39S ribosomal protein L19, mitochondrial      
Location in the cell
Mitochondrial   Reliability : 2.323 Nuclear   Reliability : 1.877
 

Sequence

CDS
ATGGCTGTAACTTTAAGAAAATCAACGGAACTGTTCACAGTTGCAAAATGGTTAACGCGCAGAGACTGCCGCACTTTGTCTTCGCTACCGGAGAAGGCAAAACTCGCGTCACTCGAGGTGACTGAAAAAGCTGAGACGTCTAGGCGTAGACCTAAAAAGGTGAATCCTCTGTTGGAGAATAGACATGCCTACCCCGAATTTCTGCCTGATCCGAACCCTAAATGGCGTAATTCCTTGCGAGAAAAGTTGGAAAGGGCGGATATGTTGAAACGTAGAAATCAGATTGACATACCTGAGTTTTATGTTGGGTCTATCTTGGCAGTAACAATAGCTGATCCTCATTCACAAGGCAAGACCAATAGGTTTGTTGGAATATGTATTGAGAGAAAAGGATGTGGATTGAGAGCTGAGTTTACTCTAAGGAATGTTGTTGATCATCAAGGAGTTGAGGTACGCTATGATCTATATGATCCAACAATACACAAGATTCAAGTGTTACGTGTTGAAAAGCGTCTTGATGATAAATTATTTTATCTGCGTGATGCTTTGCCAGAGTATAGCACTTTTTCATTTGATATGGACCCGGAAATACTACCTGAAGGAACTCCAGTACCCATCAATCCAGTGAAGGTTGAACTTAAACCAAAACCATGGCTTGAACGATGGGAGCGACAAGAATTGCAAGGAATTTCTAATATTGAACAGTATTTGACAAAAAAAGATAAAGTGAGAAGAGAACTAAGAAAAACACCCTGGGAAAAATATGATTTGATGAAGCAATACAGGAAAACTATTCCAATTGAGGAACAGACTGATATTTGGTCTGAAGTGAACAGTCAATTACAGCAGTTACAACTAGCGCGCAAGAAATCAACAAGGAAACGCACCTTTAGTGCCCCTAAAACGCAACTTGGTTGA
Protein
MAVTLRKSTELFTVAKWLTRRDCRTLSSLPEKAKLASLEVTEKAETSRRRPKKVNPLLENRHAYPEFLPDPNPKWRNSLREKLERADMLKRRNQIDIPEFYVGSILAVTIADPHSQGKTNRFVGICIERKGCGLRAEFTLRNVVDHQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLRDALPEYSTFSFDMDPEILPEGTPVPINPVKVELKPKPWLERWERQELQGISNIEQYLTKKDKVRRELRKTPWEKYDLMKQYRKTIPIEEQTDIWSEVNSQLQQLQLARKKSTRKRTFSAPKTQLG

Summary

Subunit
Component of the mitochondrial ribosome large subunit (39S) which comprises a 16S rRNA and about 50 distinct proteins.
Similarity
Belongs to the bacterial ribosomal protein bL19 family.
Keywords
Complete proteome   Mitochondrion   Reference proteome   Ribonucleoprotein   Ribosomal protein   Transit peptide  
Feature
chain  39S ribosomal protein L19, mitochondrial
EMBL
BABH01011399    KZ149914    PZC78023.1    NWSH01000174    PCG78752.1    AGBW02008814    + More
OWR52497.1    KQ459582    KPI98766.1    GDAI01000524    JAI17079.1    GBXI01017261    GBXI01000901    JAC97030.1    JAD13391.1    KB632390    ERL94514.1    CH940650    EDW68206.1    GEZM01100731    JAV52805.1    BT128569    AEE63526.1    CH933806    EDW15336.2    AAAB01008987    EAA01492.2    APCN01000816    CAQQ02036530    CH964232    EDW80963.1    CH916369    EDV92912.1    CH902617    EDV42806.1    CH479185    EDW38211.1    GAKP01007089    JAC51863.1    GBYB01006094    JAG75861.1    CP012526    ALC47861.1    CM000070    EAL28958.2    GDHF01019214    JAI33100.1    AE014297    AY061413    GAMC01014849    GAMC01014847    GAMC01014846    JAB91708.1    JRES01000266    KNC32782.1    CM000160    EDW96546.1    CM000364    EDX13735.1    OUUW01000008    SPP84053.1    KK853022    KDR12367.1    CH954181    EDV49893.1    CVRI01000048    CRK99063.1    CH480815    EDW42999.1    JXUM01134258    KQ568095    KXJ69143.1    GAPW01002756    JAC10842.1    AXCM01000086    ATLV01019122    KE525262    KFB43749.1    CH477299    EAT44311.1    GFDF01005066    JAV09018.1    GFDF01005065    JAV09019.1    PYGN01000536    PSN44625.1    AXCN02001485    NNAY01004197    OXU18215.1    GGFL01003216    MBW67394.1    CCAG010012732    ADMH02002066    ETN59697.1    JXJN01013026    JXJN01013027    JXJN01013028    GEDC01001085    JAS36213.1    GFDL01011210    JAV23835.1    GFDL01011216    JAV23829.1    KQ434926    KZC11706.1    GBRD01011770    JAG54054.1    GBHO01032821    GBHO01014620    JAG10783.1    JAG28984.1    AJVK01007991    NEVH01025158    PNF15604.1    DS232258    EDS38578.1    GDHC01010194    JAQ08435.1    DS233464    EDS30112.1    GDKW01002311    JAI54284.1    ACPB03006259    GAMD01000979    JAB00612.1    GECL01001535    JAP04589.1    KQ978747    KYN28664.1    ADTU01004613    KQ971338    EFA01965.1    KQ976433    KYM87311.1    KQ981685    KYN38018.1    KQ977720    KYN00457.1    GGMS01007878    MBY77081.1    GL451131    EFN79961.1    ABLF02020541    AK341581    BAH71940.1    GEBQ01002937    JAT37040.1    GEBQ01013963    JAT26014.1    GECU01015121    JAS92585.1    KQ982944    KYQ48879.1    GL436526    EFN71786.1   
Pfam
PF01245   Ribosomal_L19
Interpro
IPR038657   L19_sf        + More
IPR001857   Ribosomal_L19       
IPR008991   Translation_prot_SH3-like_sf       
SUPFAM
SSF50104   SSF50104       
Gene 3D
PDB
5AJ4     E-value=1.90018e-49,     Score=493

Ontologies

Topology

Subcellular location
Mitochondrion  
Length:
305
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0666
Exp number, first 60 AAs:
0
Total prob of N-in:
0.06199
outside
1  -  305
 
 

Population Genetic Test Statistics

Pi
232.415081
Theta
182.656188
Tajima's D
0.967762
CLR
0.115502
CSRT
0.656767161641918
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号