Gene

KWMTBOMO03863

Annotation

PREDICTED:_uncharacterized_protein_LOC106713896?_partial_[Papilio_machaon]

Location

Bomo_Chr7(+):5125296-5127153      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 2.56

CDS

ATGCTTAGTCTATCCGGTGTGCGGCTGTCGGCTGTAGAAGACCGAATAAAGGTGAATCGGGGTATATTTCAGGGTGATTGTCTGAGTCCATTGTGGTTTTGCCTGGCCCTGAATCCTCTCAGTTCATTGCTGGAGGCTTCGAGGACAGGCTTTCAGTTCCGAAGGGGGGGCTTGAAGGTGTCCCACTTGTTCTACATGGATGACCTCAAGTTGTACGCTCCTCATGCTGCAGGCCTCAGGCGACTGCTTGACATCACTTGTGATTTCAGTAGTCGCATTAGGATGAGGCTGGGAGTCGACAAGTGTGCGGTTCTCCATGTAGAGAGAGGGAGCATAGTCTCATCGGATCGTTTACCTGTATCCGATGGGATAAACCTTCGGGCACTCTCCGAGGGAGAAACATACCGGTACCTGGGCATGTCGCAAAATTTAGGTATTGACGTGGCGGTCGTCAAACAGGCTGCATGCGACGTGTTTTGTGAACGTTTGACAAAAGTGTGCAAGAGCCTTTTGTCGGGCGTGAATAAGACAGGGGCGTTTAACGGCTGGGCGATGCCCGTCCTGTTGTATACCTTCGGCGTGCTCAGGTGGACTCAGACCGAACTGGATGCCCTGGATAGAAAAGTCCGCTCAATTATGACCCTCCATAGGATGCTCCACCCGAAGTCCTCGGTAATGAGATTGTACATCCCGCGGAAGTGTGGTGGCCGGGGCCTACTTAGCGCCAAGGTCATGCACAACAGTGGGGTGTGCAGTCTCAGGGAATATTTCCTATCGAGGGCTGACAGTGTGATGCACAGAGAGGTCATGGAATGCGACAAAGGACTGACCCCGCTAGCCCTGGCCAGAGACGGGTGGCAATCACCGGCGGTACTCAGTACCTCTGACCGTGAGGCCATATGGAAAGGGAAAGAGCTGCACGGACGCTTCTTTCAGGCACTGCATGAGCCCCACGTGGACAAAGAAGCCTCCGTGCACTGGCTGCGATTCGGTGACGTCTTTGGGGAAACCGAGGGTTTTGTCTGTGCAATACAGGATCAGGTTATCAGGACGAACAACTATAGGAAGCACATTCTGAGGGATGGGACAGCTGACATCTGTCGATTATGCCGCCGACCGGGTGAATCCCTCAGACATGTCACCTCTGGTTGTTCTATGCTTGCTAACACTGAGTACTTGCACAGACATAACCAAGCAGCCAGAATCCTCCACCAAGAGCTCGCCCTTAAGTATGGCCTCATCGAACAGAGGCTACCGTATTATAAGTACCAGCCGGACGCTGTACTCGAAAACGACCGTGCCAAGCTCTACTGGGACCGGCCCATCATTACGGACAGGACTATTCTTGCGAATAAGCCTGATATCGTGCTGATGGACCAGACGGAGTCTCGGGTATTTCTGGTGGATATCACCATCCCCTACGACGAGAACCTCGTGCGGGCCGAGGCAGATAAAAAGACCAAATATTTGGACCTGGCGCACGAGGTGACCGACATGTGGAGGGTGGTATCTACAGAAATAATCCCGGTAGTTGTGTCGGTGAATGGTTTGGTCCCTAAAAGCCTCTCAAAACATCTCGAGAGACTTGGTCTCAACAAAAAGTCGGTGGTGGCCCAAATGCAAAAAGCAGTCTTGCTCGACAATGCCCGTATAGTTCGCCGGTTTCTCTCCCAATAG

Protein

MLSLSGVRLSAVEDRIKVNRGIFQGDCLSPLWFCLALNPLSSLLEASRTGFQFRRGGLKVSHLFYMDDLKLYAPHAAGLRRLLDITCDFSSRIRMRLGVDKCAVLHVERGSIVSSDRLPVSDGINLRALSEGETYRYLGMSQNLGIDVAVVKQAACDVFCERLTKVCKSLLSGVNKTGAFNGWAMPVLLYTFGVLRWTQTELDALDRKVRSIMTLHRMLHPKSSVMRLYIPRKCGGRGLLSAKVMHNSGVCSLREYFLSRADSVMHREVMECDKGLTPLALARDGWQSPAVLSTSDREAIWKGKELHGRFFQALHEPHVDKEASVHWLRFGDVFGETEGFVCAIQDQVIRTNNYRKHILRDGTADICRLCRRPGESLRHVTSGCSMLANTEYLHRHNQAARILHQELALKYGLIEQRLPYYKYQPDAVLENDRAKLYWDRPIITDRTILANKPDIVLMDQTESRVFLVDITIPYDENLVRAEADKKTKYLDLAHEVTDMWRVVSTEIIPVVVSVNGLVPKSLSKHLERLGLNKKSVVAQMQKAVLLDNARIVRRFLSQ

Uniprot

A0A3S2LN57   A0A3S2ND61   A0A2H1WHZ3   A0A1S4EQ35   W8BF34   D7GYL6   + More
H3AB60   Q76IN5   A0A1S3DB34   H3BBL0   H2ZWF0   W8AXW6   A0A2H1VUG2   H3B0R3   A0A1S3DFN1   A0A1S3CYA3   E0VA19   E0VPJ4   A0A1Y1MT60   A0A2J7PIT9   A0A2J7PDQ6   E0VSD9   E0W0M4   E0W0H3   E0VPK6   H3AA24   H3AYE9   H3A710   A0A3B3I0I7   A0A3P9MNJ5   A0A336M9S3   A0A3Q0J2S4   A0A3P8NFL6   A0A3P8PU69   A0A3P8QAR5   A0A3P8NT65   A0A3P8NVY4   A0A3P8R5E8   A0A3P8NRB8   A0A3P9LVD0   A0A3P8QPZ9   A0A3P8PST2   A0A3B3HW39   A0A3P8QC13   A0A3P8Q3U1   A0A3P8NKM6   A0A3P8PQZ9   A0A3P8PU63   A0A3P9MMW4   A0A3P8P1Q8   A0A3P8Q816   A0A3P8QTM2   A0A3P8PSV9   A0A3P8PUT7   A0A3P8QK92   A0A3P8P1I6   A0A3P8Q8N4   A0A3P8QRC6   A0A3P8PIV2   A0A3P8P9Q9   A0A3P8P8J8   A0A3P9M4C8   A0A3P8NLS5   A0A3P8QJR1   A0A3P9DUW1   A0A3B3I5C9   A0A3B3HQX9   A0A3B3H8G1   A0A3B3H9G8   A0A3B3HU40   A0A3B3ILW9   A0A3P8NH43   A0A3P9K6Z6   A0A3P8QRQ3   A0A3B5PPD0   A0A3B3HNT5   A0A3P9QFG6   A0A3B3HQ99   A0A0S7ESG3   H3A9J0   H3AWP0   A0A2P2HZD8   A0A3B3H9C1   D7GYE3   H2ZXX1   H3A541  

Pubmed

24495485    18362917    19820115    9215903    12949131    20566863    + More
28004739    17554307    25186727    23542700   

EMBL

RSAL01001347    RVE40825.1    RSAL01000200    RVE44451.1    ODYU01008727    SOQ52576.1    + More
GAMC01018221    JAB88334.1    GG695857    EFA13462.1    AFYH01227415    AB097127    BAC82595.1    AFYH01052121    AFYH01259886    GAMC01016897    JAB89658.1    ODYU01004516    SOQ44481.1    AFYH01017561    DS235004    EEB10225.1    DS235366    EEB15300.1    GEZM01022180    JAV88769.1    NEVH01024955    PNF16260.1    NEVH01026385    PNF14463.1    DS235750    EEB16295.1    DS235861    EEB19180.1    DS235859    EEB19129.1    EEB15312.1    AFYH01207636    AFYH01132769    AFYH01245796    UFQT01000728    SSX26770.1    GBYX01473740    JAO07919.1    AFYH01147180    AFYH01142702    AFYH01142703    IACF01001441    LAB67141.1    GG695465    EFA13373.1    AFYH01264165    AFYH01248595   

Proteomes

UP000283053    UP000079169    UP000007266    UP000008672    UP000009046    UP000235965    + More
UP000001038    UP000265180    UP000265100    UP000265160    UP000002852    UP000242638   

Pfam

PF00078   RVT_1

Interpro

IPR000477   RT_dom        + More
IPR001611   Leu-rich_rpt       

ProteinModelPortal

A0A3S2LN57   A0A3S2ND61   A0A2H1WHZ3   A0A1S4EQ35   W8BF34   D7GYL6   + More
H3AB60   Q76IN5   A0A1S3DB34   H3BBL0   H2ZWF0   W8AXW6   A0A2H1VUG2   H3B0R3   A0A1S3DFN1   A0A1S3CYA3   E0VA19   E0VPJ4   A0A1Y1MT60   A0A2J7PIT9   A0A2J7PDQ6   E0VSD9   E0W0M4   E0W0H3   E0VPK6   H3AA24   H3AYE9   H3A710   A0A3B3I0I7   A0A3P9MNJ5   A0A336M9S3   A0A3Q0J2S4   A0A3P8NFL6   A0A3P8PU69   A0A3P8QAR5   A0A3P8NT65   A0A3P8NVY4   A0A3P8R5E8   A0A3P8NRB8   A0A3P9LVD0   A0A3P8QPZ9   A0A3P8PST2   A0A3B3HW39   A0A3P8QC13   A0A3P8Q3U1   A0A3P8NKM6   A0A3P8PQZ9   A0A3P8PU63   A0A3P9MMW4   A0A3P8P1Q8   A0A3P8Q816   A0A3P8QTM2   A0A3P8PSV9   A0A3P8PUT7   A0A3P8QK92   A0A3P8P1I6   A0A3P8Q8N4   A0A3P8QRC6   A0A3P8PIV2   A0A3P8P9Q9   A0A3P8P8J8   A0A3P9M4C8   A0A3P8NLS5   A0A3P8QJR1   A0A3P9DUW1   A0A3B3I5C9   A0A3B3HQX9   A0A3B3H8G1   A0A3B3H9G8   A0A3B3HU40   A0A3B3ILW9   A0A3P8NH43   A0A3P9K6Z6   A0A3P8QRQ3   A0A3B5PPD0   A0A3B3HNT5   A0A3P9QFG6   A0A3B3HQ99   A0A0S7ESG3   H3A9J0   H3AWP0   A0A2P2HZD8   A0A3B3H9C1   D7GYE3   H2ZXX1   H3A541  

KEGG

101742326    no KO assigned | (RefSeq) zinc finger and BTB domain-containing protein 41-like

GO

GO:0003964   GO:0016021  

Length:

558

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.20821

Exp number, first 60 AAs:

0.08011

Total prob of N-in:

0.00643

outside

1  -  558

 

 

Pi

300.888631

Theta

124.97607

Tajima's D

4.969678

CLR

0.423059

CSRT

0.999950002499875

Interpretation

Possibly Balancing Selection