SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03858
Pre Gene Modal
BGIBMGA010179
Annotation
PREDICTED:_uncharacterized_protein_LOC106131527_isoform_X1_[Amyelois_transitella]
Location in the cell
Cytoplasmic   Reliability : 2.046
 

Sequence

CDS
ATGGCTTGCTATGAACAGTTATCGATTTTAGTGCTGTGCATTTGTTTACACCGTTCTCTACAGTTGATTCCGTTGCCGGAATACATACATCCTTGCGCTGAGCTGAGCGACGAGTGCTTCACCAAAGCGACCCTCGATGCCATACCAGGGATAGTCAAGGGCATCCCTGAGGCTGGGATCCCGCCCCTAGATCCCTTATACTTGGACAAAAACATCAGTATTGTTCTACCGGGGAATTTGAGGATGACCTTTCACAATGCGAAACTCGTTGGGCTGAGTTCATGTGTGCCAGATAAAGTGTCTTCTCTTCGCGACAAACGCTTGTTTATATTTGACATGCACTGCAATTTCACCATACGCGGAGTCTACAGTCTGCTCGGGAGGCTGCTATTGTTCAATCTTGACACTGAAGGGGGAGCTAAGGTTAAAATCTGGAACCAACATATTCGTTTAGAGGTTGCTGAGAGAGTTGTGATCAATGAAAAAGGCGAGGGGCATTACAAGATCAACTCGTACCAATACAAGGCAGATTACGGCACCGATCTCAAACTGAACTTGACGAACTTAATTCGAGGGAATCCTGAAATAAGTGCGAACATTTTGAAAGTCTTGAACTCAGACTCGCAAGCGTTCGCTCAAGAATTCGGCGGCCCGATCCTTGATTACGCGATAGACTACGCCATGAACGTAACGCAGCGATTCTTCGACGCATTCACATACGACCAGCTGACGCAAGTTCCATTAACAGATGACTTCTTCGAGAAAGAATAA
Protein
MACYEQLSILVLCICLHRSLQLIPLPEYIHPCAELSDECFTKATLDAIPGIVKGIPEAGIPPLDPLYLDKNISIVLPGNLRMTFHNAKLVGLSSCVPDKVSSLRDKRLFIFDMHCNFTIRGVYSLLGRLLLFNLDTEGGAKVKIWNQHIRLEVAERVVINEKGEGHYKINSYQYKADYGTDLKLNLTNLIRGNPEISANILKVLNSDSQAFAQEFGGPILDYAIDYAMNVTQRFFDAFTYDQLTQVPLTDDFFEKE

Summary

EMBL
NWSH01000134    PCG79201.1    AGBW02009838    OWR49779.1    KQ460075    KPJ17901.1    + More
ODYU01002142    SOQ39253.1    GCVX01000226    JAI18004.1    EU834742    ACF39403.1    KQ459582    KPI98776.1    MF196307    ATU07289.1    AK401241    BAM17863.1    NWSH01000154    PCG78989.1    MF196303    ATU07285.1    KZ149950    PZC76664.1    KQ459600    KPI94189.1    AK402095    BAM18717.1    KT443978    ANC68526.1    PCG78990.1    KQ461195    KPJ06750.1    ODYU01002134    SOQ39241.1    PZC76666.1    KPJ06751.1    BABH01015382    GCVX01000234    JAI17996.1    GCVX01000231    JAI17999.1    AGBW02008184    OWR54054.1    BABH01015388    AGBW02008844    OWR52406.1    EZ407196    ACX53757.1    RSAL01000004    RVE54631.1    PZC76662.1    PCG78987.1    JTDY01004884    KOB67634.1    ODYU01001389    SOQ37507.1    OWR54053.1    KQ459037    KPJ04311.1    ODYU01000574    SOQ35570.1    BABH01015389    BABH01015390    BABH01015391    NWSH01001221    PCG72068.1    AK401191    BAM17813.1    KPI94188.1    AGBW02010413    OWR48563.1    ODYU01012978    SOQ59553.1    KQ459595    KPI95814.1    RBVL01000123    RKO11885.1    AF117578    AAF16700.1    AK401330    BAM17952.1    PZC76676.1    KT443975    ANC68523.1    EU834740    ACF39401.1    NWSH01000992    PCG73195.1    RSAL01000006    RVE54237.1    AGBW02010899    OWR47537.1    GCVX01000229    JAI18001.1    KQ460313    KPJ16053.1    NWSH01001136    PCG72453.1    AGBW02011789    OWR46125.1    KPI95933.1    RVE54626.1    BABH01039669    BABH01039670    MF196312    ATU07294.1    BABH01039666    BABH01039667    AB196708    BAE43416.1    AB196702    AB383136    BAE43410.1    BAH97092.1    KT443977    ANC68525.1    AB383143    BAH97099.1    KQ460473    KPJ14399.1    MF196306    ATU07288.1    ODYU01001950    SOQ38859.1    ODYU01006397    SOQ48206.1    EZ407269    ACX53824.1    GCVX01000228    JAI18002.1    GCVX01000232    JAI17998.1    AB383144    BAH97100.1    AB196700    BAE43408.1    PCG73196.1    KP975116    ALT31635.1    KZ149944    PZC76852.1    RSAL01000173    RVE45077.1    NWSH01002781    PCG67547.1    AB196703    BAE43411.1    KT443979    ANC68527.1    EZ407252    ACX53809.1    PZC76677.1    NWSH01001445    PCG71215.1    RBVL01000182    RKO11020.1    ODYU01002699    SOQ40537.1    KP975118    ALT31637.1    GDQN01009976    JAT81078.1    KZ149964    PZC76239.1    PZC76238.1    GCVX01000230    JAI18000.1    RSAL01000076    RVE48836.1    AB383142    BAH97098.1    KX585302    ARO70195.1   
Pfam
PF06585   JHBP        + More
PF07648   Kazal_2
PF00050   Kazal_1
Interpro
IPR010562   Haemolymph_juvenile_hormone-bd        + More
IPR038606   To_sf       
IPR002350   Kazal_dom       
IPR036058   Kazal_dom_sf       
SUPFAM
SSF100895   SSF100895       
Gene 3D
PDB
4G0S     E-value=2.7653e-21,     Score=249

Ontologies

Topology

SignalP
Position:   1 - 21,         Likelihood:  0.712787
 
 
Length:
256
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.20808
Exp number, first 60 AAs:
0.12277
Total prob of N-in:
0.03229
outside
1  -  256
 
 

Population Genetic Test Statistics

Pi
279.375892
Theta
173.270104
Tajima's D
2.032458
CLR
0
CSRT
0.887055647217639
Interpretation
Uncertain
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