Gene

KWMTBOMO03855

Pre Gene Modal

BGIBMGA010194

Annotation

Putative_DNA_helicase_Ino80_[Papilio_xuthus]

Location

Bomo_Chr7(+):4607936-4612603      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.416

CDS

ATGTCTGAAAAGCTAGCCAGGAATACAGTGCTGAAGAAACATGAGGTTGCTAGGCCCGTACATATACAGCGGTTAGAGGCTGCACTGGATATACGCTCGTTCGTTAGTCAAGTAGAGAGGATACTGAATTCTGATGATCAATCCGACAGCGACGACGATTCTAAATCTTTAATTAATGAAATATCCAGGAATGACCGAATTCTGCACGGTGTTGTCACAACGAAACAAGAACGACAAAGTGACCGACTTCGCCTCTACAATTTCTCTTCCGTTGGAGAAGAAAGACAGTGGATAAGAGATGTTCTTCTCTCTTCTGAATCCGAAACAAGTACAGATGATGAAACGACAGAGTCAAAAGAGCTTAGATTAAAAAGAATATTGAAAGAAAGGAGATACCATAACAGATATGCTAGACGTTATTATAAAGATCCTACAAACACCCGCTACATGTACTATGGGGCTGGTGTTTTGTCTACTGTGGATCGGTACCCTGAACGCCGTGTCAGTCGACCCATGCCTCAACTACCGGGAAGTAGAGGCCGTCGAGGTCGTCCATCCGAGAGAGGGTCTACTAGGGGCTTTAGTAAATCTAGAAGGGGAAGACTTCGAGATGCACGGTGTAATGAAAGTAATGATTTGCCTGACGGAGTTGATTGGGAGGAACAGTTACGGCATCTGAAGGAAGAGAATGATCCAGATGATTTTAGCATAGCTAATGATAAACAGGGGGCCAGGGGGCGTAAAAAGTTATCGACGTTGAAGAGTCCCGAAGCGCTAACAGCACGAAGGCGTCGACACTGGCTTTTGCTCGTAAAGAAGGAATTGGGTAAAGTACAAAGAGCAAGAGCAGCCACTCATAGAGAAGTTACACTTCAGAGGAAAAGATTAGCTACTTTGTGTTGTAAGCATTGGCGGCATATTGCTATGCAGAGTCAGAAGAACATGAAAGAGACCGTGTGGCGTTGCAAGCGGCTGAGTCGCGAGATGCAGGCCTACTGGCGCAGGTACGACCGCGCCGAGCGAGAGACCAGGAGGCGGATGGAAAAAGAAGCCGAAGAACAACGCAAGATGGACGTAGAATTGATGGAAGCAAAGCGTCAACGTCGCAAATTGAATTTTTTGATAACGCAAACCGAGCTGTACGCTCACTTCATGCAGCGGAAGATGAGTGCAGTGGAGGACAGCGACACCGGAGCCGATCATATACTCAGGCAACTGGACGAAGACCGAGATCCCAGGCTGGCTTCTATAGATTGTTACGACAGGTGA

Protein

MSEKLARNTVLKKHEVARPVHIQRLEAALDIRSFVSQVERILNSDDQSDSDDDSKSLINEISRNDRILHGVVTTKQERQSDRLRLYNFSSVGEERQWIRDVLLSSESETSTDDETTESKELRLKRILKERRYHNRYARRYYKDPTNTRYMYYGAGVLSTVDRYPERRVSRPMPQLPGSRGRRGRPSERGSTRGFSKSRRGRLRDARCNESNDLPDGVDWEEQLRHLKEENDPDDFSIANDKQGARGRKKLSTLKSPEALTARRRRHWLLLVKKELGKVQRARAATHREVTLQRKRLATLCCKHWRHIAMQSQKNMKETVWRCKRLSREMQAYWRRYDRAERETRRRMEKEAEEQRKMDVELMEAKRQRRKLNFLITQTELYAHFMQRKMSAVEDSDTGADHILRQLDEDRDPRLASIDCYDR

Similarity

Belongs to the G-protein coupled receptor 3 family.

Uniprot

H9JKZ3   A0A3S2NQ22   A0A2A4K6A4   A0A194PZM0   A0A194RKP3   A0A212F7T1   + More
A0A2J7PKQ2   A0A1B0CSZ6   A0A1B0DNK0   A0A1S4FW14   A0A0P6IY78   E0VLM8   A0A1W7R5H8   A0A026WXS2   A0A0J7KMV8   Q16MC2   A0A195C848   E1ZYB9   B0XIW9   A0A0L7R5G0   A0A088A1A6   A0A2A3ENC5   A0A2A3ENZ4   A0A0C9S052   K7INJ4   A0A154P0L6   A0A224X574   A0A023F403   A0A0M9ABP7   A0A195DCJ5   A0A151X9Z7   A0A158P466   A0A336MQW6   A0A067QYJ1   A0A1I8N1Y1   A0A195BD82   A0A195FW22   A0A1B0GB72   A0A3F2Z4A4   A0A1A9VEY4   A0A1Q3F3J2   A0A0A1XBH9   A0A1J1IXF8   W4VRN0   A0A1A9X1K8   A0A3L8DFC9   A0A1A9XZ37   A0A0K8UJR8   A0A0K8VGF9   A0A1B0B3A3   A0A034VFD8   A0A1I8P0R2   A0A182NLU5   A0A182YJ33   A0A182SK95   A0A182WM91   A0A2R7X541   A0A182QXK5   A0A182MB26   A0A182K429   A0A182RUV7   A0A182X0Z3   A0A182UHL8   Q7Q9V0   A0A182VMG1   A0A182LB32   A0A182HPF7   A0A2M4CXS1   A0A2M4CXS2   W5J4W7   A0A084WKZ3   A0A182IV63   A0A210QRR9   A0A0L8ICQ8   A0A0M3QY47   Q293N9   B4GLV5   A0A2S2R0E5   V3ZKT7   A0A2R5LDZ6   A0A2C9KB78   A0A2C9KB65   A0A2C9KBD3  

Pubmed

19121390    26354079    22118469    17510324    26999592    20566863    + More
24508170    20798317    20075255    25474469    21347285    24845553    25315136    25830018    30249741    25348373    25244985    12364791    20966253    20920257    23761445    24438588    28812685    15632085    17994087    23254933    15562597   

EMBL

BABH01011336    BABH01011337    BABH01011338    BABH01011339    BABH01011340    BABH01011341    + More
BABH01011342    RSAL01000013    RVE53360.1    NWSH01000134    PCG79202.1    KQ459582    KPI98777.1    KQ460075    KPJ17900.1    AGBW02009838    OWR49778.1    NEVH01024534    PNF16910.1    AJWK01026806    AJVK01017627    AJVK01017628    GDUN01000149    JAN95770.1    DS235277    EEB14284.1    GEHC01001208    JAV46437.1    KK107064    EZA60837.1    LBMM01005290    KMQ91647.1    CH477867    EAT35481.1    KQ978220    KYM96313.1    GL435204    EFN73818.1    DS233397    EDS29751.1    KQ414652    KOC66120.1    KZ288215    PBC32752.1    PBC32751.1    GBYB01015175    JAG84942.1    KQ434792    KZC05466.1    GFTR01008790    JAW07636.1    GBBI01003018    JAC15694.1    KQ435710    KOX79869.1    KQ980989    KYN10611.1    KQ982353    KYQ57195.1    ADTU01001358    UFQT01001724    SSX31529.1    KK853101    KDR11347.1    KQ976519    KYM82145.1    KQ981264    KYN44039.1    CCAG010019323    GFDL01012919    JAV22126.1    GBXI01006469    JAD07823.1    CVRI01000059    CRL03233.1    GANO01001223    JAB58648.1    QOIP01000008    RLU19165.1    GDHF01025719    JAI26595.1    GDHF01014684    GDHF01011215    JAI37630.1    JAI41099.1    JXJN01007798    GAKP01018694    JAC40258.1    KK857149    PTY26882.1    AXCN02002550    AXCM01006176    AAAB01008900    EAA09385.4    APCN01002995    GGFL01005955    MBW70133.1    GGFL01005954    MBW70132.1    ADMH02002077    ETN59522.1    ATLV01024162    ATLV01024163    KE525350    KFB50887.1    NEDP02002257    OWF51446.1    KQ415990    KOF99298.1    CP012526    ALC46989.1    CM000070    EAL29175.3    CH479185    EDW38529.1    GGMS01014200    MBY83403.1    KB203827    ESO83010.1    GGLE01003562    MBY07688.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000053268    UP000053240    UP000007151    + More
UP000235965    UP000092461    UP000092462    UP000009046    UP000053097    UP000036403    UP000008820    UP000078542    UP000000311    UP000002320    UP000053825    UP000005203    UP000242457    UP000002358    UP000076502    UP000053105    UP000078492    UP000075809    UP000005205    UP000027135    UP000095301    UP000078540    UP000078541    UP000092444    UP000092445    UP000078200    UP000183832    UP000091820    UP000279307    UP000092443    UP000092460    UP000095300    UP000075884    UP000076408    UP000075901    UP000075920    UP000075886    UP000075883    UP000075881    UP000075900    UP000076407    UP000075902    UP000007062    UP000075903    UP000075882    UP000075840    UP000000673    UP000030765    UP000075880    UP000242188    UP000053454    UP000092553    UP000001819    UP000008744    UP000030746    UP000076420   

PRIDE

H9JKZ3   

Pfam

PF00176   SNF2_N        + More
PF00271   Helicase_C
PF13892   DBINO
PF01709   Transcrip_reg
PF01094   ANF_receptor
PF07562   NCD3G
PF00003   7tm_3

Interpro

IPR000330   SNF2_N        + More
IPR031047   Ino80       
IPR027417   P-loop_NTPase       
IPR038718   SNF2-like_sf       
IPR014001   Helicase_ATP-bd       
IPR020838   DBINO       
IPR001650   Helicase_C       
IPR002876   Transcrip_reg_TACO1-like       
IPR026564   Transcrip_reg_TACO1-like_dom3       
IPR029072   YebC-like       
IPR001828   ANF_lig-bd_rcpt       
IPR038550   GPCR_3_9-Cys_sf       
IPR028082   Peripla_BP_I       
IPR011500   GPCR_3_9-Cys_dom       
IPR000337   GPCR_3       
IPR000162   GPCR_3_mtglu_rcpt       
IPR017978   GPCR_3_C       
IPR017979   GPCR_3_CS       

SUPFAM

SSF52540   SSF52540        + More
SSF75625   SSF75625       
SSF53822   SSF53822       

Gene 3D

3.40.50.10810     3.30.70.980     2.10.50.30    

CDD

cd00079  HELICc

ProteinModelPortal

H9JKZ3   A0A3S2NQ22   A0A2A4K6A4   A0A194PZM0   A0A194RKP3   A0A212F7T1   + More
A0A2J7PKQ2   A0A1B0CSZ6   A0A1B0DNK0   A0A1S4FW14   A0A0P6IY78   E0VLM8   A0A1W7R5H8   A0A026WXS2   A0A0J7KMV8   Q16MC2   A0A195C848   E1ZYB9   B0XIW9   A0A0L7R5G0   A0A088A1A6   A0A2A3ENC5   A0A2A3ENZ4   A0A0C9S052   K7INJ4   A0A154P0L6   A0A224X574   A0A023F403   A0A0M9ABP7   A0A195DCJ5   A0A151X9Z7   A0A158P466   A0A336MQW6   A0A067QYJ1   A0A1I8N1Y1   A0A195BD82   A0A195FW22   A0A1B0GB72   A0A3F2Z4A4   A0A1A9VEY4   A0A1Q3F3J2   A0A0A1XBH9   A0A1J1IXF8   W4VRN0   A0A1A9X1K8   A0A3L8DFC9   A0A1A9XZ37   A0A0K8UJR8   A0A0K8VGF9   A0A1B0B3A3   A0A034VFD8   A0A1I8P0R2   A0A182NLU5   A0A182YJ33   A0A182SK95   A0A182WM91   A0A2R7X541   A0A182QXK5   A0A182MB26   A0A182K429   A0A182RUV7   A0A182X0Z3   A0A182UHL8   Q7Q9V0   A0A182VMG1   A0A182LB32   A0A182HPF7   A0A2M4CXS1   A0A2M4CXS2   W5J4W7   A0A084WKZ3   A0A182IV63   A0A210QRR9   A0A0L8ICQ8   A0A0M3QY47   Q293N9   B4GLV5   A0A2S2R0E5   V3ZKT7   A0A2R5LDZ6   A0A2C9KB78   A0A2C9KB65   A0A2C9KBD3  

PDB

6HTS     E-value=4.0573e-28,     Score=311

KEGG

101739982    K11665 DNA helicase INO80 [EC:3.6.4.12] | (RefSeq) putative DNA helicase Ino80

GO

GO:0016887   GO:0003677   GO:0031011   GO:0006338   GO:0006281   GO:0005524   GO:0006351   GO:0004386   GO:0004930   GO:0016021   GO:0005886   GO:0042393   GO:0042766   GO:0043044   GO:0043618   GO:0032508   GO:0044212   GO:0040034   GO:0045892   GO:0005700   GO:0006464   GO:0006355   GO:0005007   GO:0008284   GO:0008543   GO:0004672   GO:0048384  

PANTHER

PTHR45685:SF2  

Subcellular location

Cell membrane  

Length:

422

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01274

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01699

outside

1  -  422

 

 

Pi

285.326962

Theta

200.101658

Tajima's D

1.190812

CLR

0

CSRT

0.709164541772911

Interpretation

Uncertain