Gene

KWMTBOMO03854

Pre Gene Modal

BGIBMGA010180

Annotation

Zinc_finger_MYM-type_protein_4_[Papilio_xuthus]

Location

Bomo_Chr7(-):4588254-4604355      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.081

CDS

ATGGATGATAATAATAGTGCACAAAAAAAATCAGATGAAGACATCACGACGGGCCATGGGGATGAAACGGAAGAGGCCAAGTTTGCTAACCAAAGCCCTAATAGCCTTGAACAATCTAGTGAAAAAACCGAAAGTGAAGTTAGTGCAGTGAAAGACATTGAGTTACAAAATCATGTTGACCACAGAGAAAGTACTGAGGAGAATGTTATTAAAAATGTTAGGAGTGATACAGAAATGACTAAAGATGAAGTTGGACTTTCAGAGGTTGATAGCCAAGATGAGTATAAAAGTGAGAAAGGAGACACAGGAGATGATACACTCAAAGAGGAATCTTTGAGTCAGGATTCATTAAGTCTGGAATCTAAAAACCACCATAACCAAAAGCCTGAGTTCCACAAGGACGATGACACTGAACCAGATAACAAGGACAAAGAAAGTGATAAGGATGATGATAAAAATAAGGAAGATGAAATTTCACCAGAGTTTGAGAAAGCTCCTAATGTTTCTATGGATGAACCACAGGAAGAAGACCACACACAGGCATTGGATCCATTTGATGCTCTTCTCAAAGATACATCTTCATTACCTGAGAAATCAAAGACTGCCAGTTTAGATGCATCTATTAACATTGATGATGAGGATGATGATATCAATGCTGATGACATTGATGGGGACTTAGGAAAGGAAGCTGAAGATGATCATGCAGGGCAATCAATTGATGACAGCAGTGTGTCAGGAATAGCTGAAGAGCCTGGTGCTGATGAAGAGGTCTGCTTATTACCAGACACCGAGCGGGAAATCTCAGAAGCAGACAAAGCTGAAGCCGAAAAAGTATTGGCAGAAAAGAGGAAACAGGCTGAAGCTGAAGCTGCATCACTAGCAGTACCCAAACAGGAGCATGAACCTAATGCTGAAGCGAATTCTGATGAAACACCTGCTGATAATGCGGATCAAATTGAAGCAGCTGAAGATCCTGCACAGGAGAATGGAGATAAAGACAATGAACATGATGAAAGTATAGATACAGAGGAATCCACAGTTACTAATATTATTCAGGAGAGTGCTCCCACTGAAGGGAAATGTGTTCAATGCACTACAGTAAAGCCATGCTACTTCCGATTTACAAAAAAAGGAGATACTATGTTGCTGTGCAGTGAAATGTGTGAATCAAGATATGAAACTCAAAATCCAGGACAATATAAGATAACCCAAAAAAAATATTTAATTGAAGAAATCGTTCCTAACTATTTATCATGTTCAGAGTGTGAGGAAATGAAAGTTTGTTATTTCTATTACAATTACGACGGCGAAGACACGAATTATTGTTCTCTAAGTTGTTTATACAGTATGATGGCCGATGAGAGAGAAAAGTATACATATAAACGAAGAAAAATAGTCGCACAAGAGGTTGAACCAGTTGAAGGTCAATGCTGTGTTTGTAATCAGATGAAAAACTGTAAATTCACGATAACTAAGTATGGGGAAAAACTTTTAATTTGCGAAGCAAATTGTATTCACACTCTGAATTCAGAAGAACAAGGCAGGTATATTCTTAAAATGCTTAGGCCTGTTAGAAAGCAACCAACAAGAAAAAAAGCAAACCCACCTCTGTTAAAATTGAAGGTTATCAGCAATGCCACAGACAAGTACTTAGATGAAGCATATAAAATTCAAGCAAAAACACCTGCCATGGTTCAAGCCGCTAGGGAAGAAAGGGATAGAACATTTTTACGTAAATGTACCTATTGTTATATGTTACTTGATGTAAATGAGAAAATGTTGGTTTGGGAGACAATGGACTTTTGTGGTGAAGTGTGTTTAGGACGATATCAGAATAAAATTGGATCTAGATGTGCAAACTGTAAGAATCCAGTGCTGCATACAAGCTTGGGAAAATATTGTGTCAGATTTGGTTATGACATCCGACAGTTTTGTAATTCGGCATGTTTAGAAGAGTTTAAGAAAGGATTGAAGATATGTTGTTATTGTCAAAGAGATATCTCCTCTGGTCACCAAGGTTTTTTGGCTCCTGTTGGTGATAAAGGCCAATTCAAAGACTTCTGTTCTCAAAACTGCATGGGAAAGTTTGATCAGATGAGTAAGAATCCAATACCGCAGGCGGTGTGGGCGAAGTGCGCGGTGTGTTCTTTAGAGAAGGCCACAACGATTGAGGTTGAAGTTTCCGAAGAAGTAACACAGAGATTATGTTCAGATCCATGTTTTGCTGCATTTAAATTTGTAAATAATATATTTCCAGATCAGTGTCGATGGTGTAAAAAGTACTTTGAAAGAAAATTGACAAAATGTTTTTCGATATATGACGACACAGAGGCGATATGTTTTTGTTCAAAGTCCTGTCTAAACGTGTATATAAGTAACACTCGACACATAGTTCCCTGCAGTTGGTGTAAAGTGAAAAAATACAACTTTGATATGATAAAGCGGATACCGGCAAGCGGACAAGCAGTGTTGATGTGTTCTCTTAATTGTTTGAATCTCTACCAAGTTTCCATAAATGCTGTATCATCGAGAAGGACCAAATGTGACCTGTGTAAAAGAACGTCATTAGCTCAATACCATTTGACAATGTCTGATGCGACAGTTCGAAACTTTTGCACGTATCAATGCGTCATGTCATTTCAGGGTCAGTACTCAAAGCACACACCTCCACTACTCCCCGGCGAGTCAATTGATCAACAGAAAGCGGTCCCGACAGGCGCACCGAGGCGAAATTACAATGCTTCTGGAAAAAATAATACACAACGAACAGCCAGTGAAGGTTTACCAGTAATCTCAAACGTGCAATCTCTGGCCAGTCCGAGTCCCTCTGTGGCCATCACCCGCGGCAAGTCCAAGCGGCTCGCCCAGCCCCCGCCCGCAGCCGCGCCCCCCGCCGCGCCCCCCACCCCGCCGCCGCCTCCTGCGCCACCCACACCGCCGCCCCCGCCCCCGCCCAAGGTCTACAACCACGTCATCGTCAAAACGCTACCTCCTCGAGAGGTGGCCAACAAAGGGACCATGTCGAAGCCGATGATGGTTTCCAAAGGTGTCTCATGTCGACCCCATCCCTGTACGAAAGAGTGCCAGACAGATTCGAGCTTGGAACGAAAAGTTTTGATCCCTGTCCCGGTTCCGATATATGTGCCGGTGCCGTGCGTCATGTGGTCTCTGCCCTTCCCTGTCCCCGTACCCATTCCCATTCCGGTACCCACTCCGGTCTTCATTCCGACGACGAGGAATTCCGCTAAAGGAATAATGAAGGAAATAAACAAGATACACGACAAGATGCCCACAGATCCATTTGAAGCGGAGTTGTTGATGATGGCTGAAATGGTAGCCGGGGATAAGAAGAAAGATCAAAGTGATTCAGATACTGATGACGATAATGCGGAAGAAGGATTCAGCCCCGTAGCAGGCATGGACGGTAATAACGCTTTCGGAGAGGACATGCTGCAGATGGCTTTAAAAATGGCCACGGAATACGAAGATCAACCGGTAGACTTAGAATCTGCAATGACAGCTAACACGATCACTCCGAGCTCACATCCCGGAATGCCTGGTCTAGAGGGTGACGGCATGCACCACCACCACCTGATGGTGATGGAGCAGCAGCGCGCGGTGGCGGCGCTGCGCGCGGCGGGGGGCGCGGCCCGCAAGCGAGTGCCCGCGCCCGCCGCGCCCCCCGCCGCGCGCCCGCAGCGCTCCGGCAAGAGGCGCCGCGCCGACCCGCCGCCCCCGCAGCCCGACCCGCCCAGGGAACCCGCAGAGAAACCTGACGCCAACATGTGCCTCAAGTACACGTTCGGCGTGAATGCGTGGAAACAATGGGTGATGACGAAAAATGCCGAAATCGAGAAAAGTTCGATACGACGGAAACCTTTTAAATCGGAGATACTGCAGCTGACTGCAGATGAACTCAACTACTCCTTATGTCTGTTCGTGAAAGAAGTCAGGAAACCGAACGGCAGCGAGTACGCTCCCGACACTATTTATTATTTGGTTTTAGGTATACAGCAATATTTGTTTGAAAATGGTAGAATAGACAATATATTTACGGATCCGTACTACGAAAAATTTACGGATTGCTTAGACGAAGTCGCTAGGAAATTTTCAGTATTGTACAACGATTCACAATACATAGTCACACGTGTAGAAGAAGAACACCTATGGGAAAGTAAACAGTTGGGAGCACATTCGCCACATGTACTGCTATCCACATTGATGTTTTTTAATACGAAACATTTTAATTTAGTGACCGTAGAGGAGCACATGCAGCTGTCGTTCTCTCATATAATGAAACATTGGAAAAGAAATCCTAACCAACCTGGCCAAGCAAAGATACCGGGCTCAAGAAACGTCTTATTGCGTTTCTATCCTCCACAATCAGCATTAGAAGCAAATTCAAGAAAAAAGAAAGTATATGAGCAACAAGAAAATGAAGAAAATCCACTTAGATGTCCTGTAAAACTATACGAATTTTACATTTCGAAATGCCCAGAGTCGGTGCGCACGCGGAATGACGTATTCTACCTGCAACCTGAGAGGTCCTGCGTTCCTGACTCGCCAGTTTGGTATTCCACGCAGCCGCTCGGAAAGAACGCCCTCGCTAAAATGCTGCATAGAGTGAAGATGGTCAAAGAAATCAATATCGCTCTTCTAACTAGCTAA

Protein

MDDNNSAQKKSDEDITTGHGDETEEAKFANQSPNSLEQSSEKTESEVSAVKDIELQNHVDHRESTEENVIKNVRSDTEMTKDEVGLSEVDSQDEYKSEKGDTGDDTLKEESLSQDSLSLESKNHHNQKPEFHKDDDTEPDNKDKESDKDDDKNKEDEISPEFEKAPNVSMDEPQEEDHTQALDPFDALLKDTSSLPEKSKTASLDASINIDDEDDDINADDIDGDLGKEAEDDHAGQSIDDSSVSGIAEEPGADEEVCLLPDTEREISEADKAEAEKVLAEKRKQAEAEAASLAVPKQEHEPNAEANSDETPADNADQIEAAEDPAQENGDKDNEHDESIDTEESTVTNIIQESAPTEGKCVQCTTVKPCYFRFTKKGDTMLLCSEMCESRYETQNPGQYKITQKKYLIEEIVPNYLSCSECEEMKVCYFYYNYDGEDTNYCSLSCLYSMMADEREKYTYKRRKIVAQEVEPVEGQCCVCNQMKNCKFTITKYGEKLLICEANCIHTLNSEEQGRYILKMLRPVRKQPTRKKANPPLLKLKVISNATDKYLDEAYKIQAKTPAMVQAAREERDRTFLRKCTYCYMLLDVNEKMLVWETMDFCGEVCLGRYQNKIGSRCANCKNPVLHTSLGKYCVRFGYDIRQFCNSACLEEFKKGLKICCYCQRDISSGHQGFLAPVGDKGQFKDFCSQNCMGKFDQMSKNPIPQAVWAKCAVCSLEKATTIEVEVSEEVTQRLCSDPCFAAFKFVNNIFPDQCRWCKKYFERKLTKCFSIYDDTEAICFCSKSCLNVYISNTRHIVPCSWCKVKKYNFDMIKRIPASGQAVLMCSLNCLNLYQVSINAVSSRRTKCDLCKRTSLAQYHLTMSDATVRNFCTYQCVMSFQGQYSKHTPPLLPGESIDQQKAVPTGAPRRNYNASGKNNTQRTASEGLPVISNVQSLASPSPSVAITRGKSKRLAQPPPAAAPPAAPPTPPPPPAPPTPPPPPPPKVYNHVIVKTLPPREVANKGTMSKPMMVSKGVSCRPHPCTKECQTDSSLERKVLIPVPVPIYVPVPCVMWSLPFPVPVPIPIPVPTPVFIPTTRNSAKGIMKEINKIHDKMPTDPFEAELLMMAEMVAGDKKKDQSDSDTDDDNAEEGFSPVAGMDGNNAFGEDMLQMALKMATEYEDQPVDLESAMTANTITPSSHPGMPGLEGDGMHHHHLMVMEQQRAVAALRAAGGAARKRVPAPAAPPAARPQRSGKRRRADPPPPQPDPPREPAEKPDANMCLKYTFGVNAWKQWVMTKNAEIEKSSIRRKPFKSEILQLTADELNYSLCLFVKEVRKPNGSEYAPDTIYYLVLGIQQYLFENGRIDNIFTDPYYEKFTDCLDEVARKFSVLYNDSQYIVTRVEEEHLWESKQLGAHSPHVLLSTLMFFNTKHFNLVTVEEHMQLSFSHIMKHWKRNPNQPGQAKIPGSRNVLLRFYPPQSALEANSRKKKVYEQQENEENPLRCPVKLYEFYISKCPESVRTRNDVFYLQPERSCVPDSPVWYSTQPLGKNALAKMLHRVKMVKEINIALLTS

Uniprot

A0A2H1VEI4   A0A2A4K607   A0A194Q1B2   A0A212F7Q7   Q17D61   W4VRG2   + More
A0A1A9XPX9   A0A1B0BCP9   A0A1W4WQ25   A0A1W4WQ24   W8BQ93   W8B3R3   A0A1W4X120   A0A1A9VCZ0   A0A034VIA7   A0A1A9ZE78   A0A034VNA6   A0A0A1XJG6   A0A0A1XP97   A0A0K8W4G9   B4NF76   A0A0K8VF41   A0A1B0FND9   A0A0M3QY90   B4M010   A0A0Q9WF50   A0A3B0JKY6   A0A3B0K7L3   A0A3B0JZP5   B3LXM0   A0A0N8P1P9   B4JRU6   I5ANI4   Q29A45   A0A0Q9XC28   B4K785   A0A0B4KHZ0   Q9VB55   A8JRE3   A0A0B4KI43   Q6AWL3   Q9N9Z6   A0A1W4UCV1   A0A1W4UR80   B3P633   A0A0R1EA79   B4PRS9   A0A0R1E9K7   A0A0R1EA78   A0A0K8VS42   A0A0K8W5I9   A0A336LQK9   B4G3V7   B4IC70   A0A0C9S0H1   A0A2C9JCF1   A0A182HFG4   A0A1Q3F0H7   A0A1Q3F0B3   B0X1C7  

Pubmed

26354079    22118469    17510324    24495485    25348373    25830018    + More
17994087    18057021    15632085    23185243    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    17550304    15562597    26483478   

EMBL

ODYU01002131    SOQ39235.1    NWSH01000134    PCG79203.1    KQ459582    KPI98779.1    + More
AGBW02009838    OWR49777.1    CH477299    EAT44309.1    GANO01003712    JAB56159.1    JXJN01012082    GAMC01014854    GAMC01014851    JAB91704.1    GAMC01014853    GAMC01014852    JAB91703.1    GAKP01015911    GAKP01015908    JAC43041.1    GAKP01015909    JAC43043.1    GBXI01002793    JAD11499.1    GBXI01009919    GBXI01008586    GBXI01001491    JAD04373.1    JAD05706.1    JAD12801.1    GDHF01006201    JAI46113.1    CH964251    EDW82943.2    GDHF01021291    GDHF01014862    JAI31023.1    JAI37452.1    CCAG010021125    CP012526    ALC47263.1    CH940650    EDW67238.2    KRF83192.1    KRF83193.1    OUUW01000005    SPP80982.1    SPP80981.1    SPP80980.1    CH902617    EDV43914.1    KPU80531.1    KPU80532.1    CH916373    EDV94486.1    CM000070    EIM52519.2    EAL27506.3    KRT00076.1    CH933806    KRG02094.1    EDW16398.1    AE014297    AGB96390.1    AAF56688.2    ABW08784.1    AGB96389.1    BT015235    AAT94464.1    AJ276394    CAC01697.1    CH954182    EDV53433.1    CM000160    KRK04324.1    EDW98522.1    KRK04323.1    KRK04325.1    KRK04321.1    KRK04322.1    GDHF01010617    JAI41697.1    GDHF01006005    JAI46309.1    UFQT01000046    SSX18859.1    CH479179    EDW25062.1    CH480828    EDW45228.1    GBYT01000023    JAG85132.1    JXUM01134258    KQ568095    KXJ69144.1    GFDL01013985    JAV21060.1    GFDL01014052    JAV20993.1    DS232258    EDS38576.1   

Proteomes

UP000218220    UP000053268    UP000007151    UP000008820    UP000092443    UP000092460    + More
UP000192223    UP000078200    UP000092445    UP000007798    UP000092444    UP000092553    UP000008792    UP000268350    UP000007801    UP000001070    UP000001819    UP000009192    UP000000803    UP000192221    UP000008711    UP000002282    UP000008744    UP000001292    UP000076420    UP000069940    UP000249989    UP000002320   

PRIDE

Q9VB55    Q6AWL3    Q9N9Z6   

Pfam

PF12012   DUF3504        + More
PF06467   zf-FCS

Interpro

IPR011017   TRASH_dom        + More
IPR021893   DUF3504       
IPR010507   Znf_MYM       

ProteinModelPortal

A0A2H1VEI4   A0A2A4K607   A0A194Q1B2   A0A212F7Q7   Q17D61   W4VRG2   + More
A0A1A9XPX9   A0A1B0BCP9   A0A1W4WQ25   A0A1W4WQ24   W8BQ93   W8B3R3   A0A1W4X120   A0A1A9VCZ0   A0A034VIA7   A0A1A9ZE78   A0A034VNA6   A0A0A1XJG6   A0A0A1XP97   A0A0K8W4G9   B4NF76   A0A0K8VF41   A0A1B0FND9   A0A0M3QY90   B4M010   A0A0Q9WF50   A0A3B0JKY6   A0A3B0K7L3   A0A3B0JZP5   B3LXM0   A0A0N8P1P9   B4JRU6   I5ANI4   Q29A45   A0A0Q9XC28   B4K785   A0A0B4KHZ0   Q9VB55   A8JRE3   A0A0B4KI43   Q6AWL3   Q9N9Z6   A0A1W4UCV1   A0A1W4UR80   B3P633   A0A0R1EA79   B4PRS9   A0A0R1E9K7   A0A0R1EA78   A0A0K8VS42   A0A0K8W5I9   A0A336LQK9   B4G3V7   B4IC70   A0A0C9S0H1   A0A2C9JCF1   A0A182HFG4   A0A1Q3F0H7   A0A1Q3F0B3   B0X1C7  

KEGG

101739842    no KO assigned | (RefSeq) zinc finger MYM-type protein 4

GO

GO:0008270   GO:0000792   GO:0006357   GO:0005705   GO:0003682   GO:0000791   GO:0035012   GO:0005634   GO:0016233   GO:0006697   GO:0032991   GO:0003743   GO:0006355  

Length:

1555

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0113

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00001

outside

1  -  1555

 

 

Pi

256.678692

Theta

183.106647

Tajima's D

0.770952

CLR

0.975545

CSRT

0.591470426478676

Interpretation

Uncertain