Gene

KWMTBOMO03852

Pre Gene Modal

BGIBMGA010182

Annotation

PREDICTED:_tubulin_polyglutamylase_TTLL4-like_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr7(-):4558051-4571715      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 3.245

CDS

ATGAGCAAGGAGCAAAGGTTTCTGACTGCTTTGCATACGACAAATCCGTTTAAAACGATACCGTCACGCAAAGAATTGCCATTAATCATCCCAGAATCGATCTCAAGCTGTCTCCGACCGTCTCTCTTCCCGCGAGTGCCCCCATACCTGCGGTTCATCGGACACGAAGACTGCACTCCGCTGAAGGTTCCAGCTCCCATACAGAAGCATCTGAAATGGAAGCTCACAACGATAACGCCTTTAGTTGTGAAGAAAACTTTGACTAATTCTGGCTTTAGACTGGTTAAGAGCGAATGTGACACGTCAGAGTGTCCGCAAGAAGAGACCGTAGAGTGGATAGGCATATGGGGCAAACATATGAAGTCAATAATGTTCAGAGCCATAAAAGATGGACAGAAGATGAATCATTTCCCCGGTACCTTCCAAATCGGCAGGAAGGATCGATTGTGGAGGAACCTTCACAAACTTTGCACTAAGTATGGAGTCAAAGAATTTGGTATTATGCCGAAAACTTACGTATTGCCACATGATCTCAAAATGTTGAAGCATGACTGGGAAAAGTATGCCGCTAACAATGAAAGGTGGATCATAAAACCGCCTGCGTCAGCCCGAGGCACCGGCATCAAGGTGGTGTCCCGCTGGACGCAGATCCCGAAGAAGAGGCCGGTCGTCGTCCAGCGCTACGTCTCTAAACCGTATCTAATTAACGGAAGCAAGTTCGACATGAGGCTGTACGTGCTCGTCACGTCGGTGCACCCGCTCAGGATATATTTGTACAAAGATGGCCTTGCCAGGTTCGCGTCGGTAAAGTACAACGATGAGTTGACATCTCTGAACGATAGGTACATGCATTTGACTAATTACTCAATAAATAGGCTGTCCAAGAATTACACGCCAAACGAAGATTTTGCTTCTTGCGAGGGACACAAATGGACATTACAAACTCTATTCCAATACCTAAAGACTGAAAAGGACGTTGACACGGAAGCCCTGTGGGATTCCATGAAGGATCTCGTTATTAAAACCATAATATCGGGCGAGGCGAGCATCAGTTCGCTGACTAAAGCCAACATAACGTCGCGGTACAACTGCTACGAACTGTTCGGGATCGATGTTCTGCTGGACGAAGATCTCAAGCCCTGGCTCTTGGAGGTGAACATCTCGCCGAGCCTGCACAGCGCGTCGCCGCTCGACATCCACGTGAAGGGGCCCCTGGTCTCCACGGTGCTCAACATCGCGCAGTTCCAAGTGCCCAACAAAACCAACTTGGAAATGTTGGTTAAGGATAAACCACACCAATTAGCTGGATTACCATACGATGGCAGATTATACACAGTGTATTTATCCAAAGAAGAGAGAGACAAGCATATAATTTATACTAATATGGATGACAGAGATTTGTACCTGCGCGACATCCTGTCGACGCTGACGCCGGACGACGTGCGGCACCTGGTGCAGGCGGAGGACGAGCTGACGCAGGGCGGCGCCATGGAGCGCGTGTTCCCGACGCGCGACACGCACCGCTACCTGCCCTACCTCGCCGGCCCGCGATACTACAACAGACTCTTCGACGCCTGGGAGACCAGATACGGGCACAACAGGACCGCCGGCATCGAGCTGCTGCGCAACCTGTGCGACATCGGGTACCACCTGGAGGTGCCGCCCGTCCCGCTAAAGAATGACGTGGATGCGCCGTCGCCGCCCGTATCGGAGCGCCAGTCAGCGGGCTCCGTCTGCTCGGCGGGCGCGGGCCTGTCGCTCGCGGCGCCGCCCCCGCTCGAGGCGCGCGCCTAG

Protein

MSKEQRFLTALHTTNPFKTIPSRKELPLIIPESISSCLRPSLFPRVPPYLRFIGHEDCTPLKVPAPIQKHLKWKLTTITPLVVKKTLTNSGFRLVKSECDTSECPQEETVEWIGIWGKHMKSIMFRAIKDGQKMNHFPGTFQIGRKDRLWRNLHKLCTKYGVKEFGIMPKTYVLPHDLKMLKHDWEKYAANNERWIIKPPASARGTGIKVVSRWTQIPKKRPVVVQRYVSKPYLINGSKFDMRLYVLVTSVHPLRIYLYKDGLARFASVKYNDELTSLNDRYMHLTNYSINRLSKNYTPNEDFASCEGHKWTLQTLFQYLKTEKDVDTEALWDSMKDLVIKTIISGEASISSLTKANITSRYNCYELFGIDVLLDEDLKPWLLEVNISPSLHSASPLDIHVKGPLVSTVLNIAQFQVPNKTNLEMLVKDKPHQLAGLPYDGRLYTVYLSKEERDKHIIYTNMDDRDLYLRDILSTLTPDDVRHLVQAEDELTQGGAMERVFPTRDTHRYLPYLAGPRYYNRLFDAWETRYGHNRTAGIELLRNLCDIGYHLEVPPVPLKNDVDAPSPPVSERQSAGSVCSAGAGLSLAAPPPLEARA

Uniprot

H9JKY1   A0A2A4K4M1   A0A2H1VEH2   A0A194Q5V0   A0A194QTB7   A0A067R8J0   + More
A0A2J7QZV7   A0A2J7QZW0   A0A2J7QZV6   A0A2J7QZW5   D6WYE8   A0A023EWR9   A0A182GJL8   A0A0T6B3W8   A0A1B6JU11   A0A1B6I987   A0A1B6JQF2   A0A1B6JXA3   A0A182WYN1   A0A023FBQ1   A0A1S4H082   A0A182I538   Q17JV3   A0A182KUI3   A0A084WC54   A0A182VAK4   A0A182NF19   A0A2M4BA23   A0A182MEP1   A0A182QQ02   A0A2M4BA66   A0A2M4BA54   A0A2M3Z0R9   A0A2M4A8B7   A0A2M4B9W0   A0A2M4CHA3   A0A2M4CHJ5   A0A2M3ZFV8   A0A2M4A7W0   A0A2M4A7L5   A0A2M4A7V4   A0A224XLX8   A0A182JZK4   A0A2M3ZG40   A0A182PFP2   A0A182UA81   Q7PVY2   A0A182WH41   A0A182INZ1   A0A182F2G2   E0VZA9   A0A182YCI6   A0A146MB87   W5JIV2   A0A1Q3F6A7   A0A1B6DER8   A0A1Q3F677   A0A1Q3F6B7   A0A182RIY8   A0A1B6C0P5   A0A1B6D6Y0   A0A1Q3F7C7   A0A1I8NC09   A0A2R7X3W7   A0A1I8NBY9   A0A1I8NBZ9   A0A1I8NBZ3   A0A336LVG9   A0A2H8TPL5   A0A0C9R429   A0A1Y1KUX1   A0A1W4VSP8   B0XFR1   A0A1S3CU55   B3N500   A0A1W4VST2   U5EQF5   A0A2S2P5Y8   A0A0Q5WAV4   B4P151   A0A1A9XV63   A0A1B0BTQ5   R4WTA1   A0A0J9R0J7   Q8IPB2   J9K688   A0A0P8XX36   A0A0R1DJQ7   A0A1S4E6M1   A0A1B0A5Y8   E9ICN0   A0A0P8ZGR4   Q8IGW4   Q9VKL9   A0A0J9R033   B3MJZ6   M9NEE5   A0A0L7QQY8   A0A0P8XGL7   A0A1B0FQW1  

Pubmed

19121390    26354079    24845553    18362917    19820115    24945155    + More
26483478    25474469    12364791    17510324    20966253    24438588    20566863    25244985    26823975    20920257    23761445    25315136    28004739    17994087    18057021    17550304    23691247    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    21282665   

EMBL

BABH01011332    BABH01011333    NWSH01000134    PCG79205.1    ODYU01002131    SOQ39233.1    + More
KQ459582    KPI98780.1    KQ461137    KPJ08768.1    KK852865    KDR14752.1    NEVH01009067    PNF34118.1    PNF34121.1    PNF34119.1    PNF34120.1    KQ971362    EFA09309.2    GAPW01000066    JAC13532.1    JXUM01068503    JXUM01068504    KQ562503    KXJ75780.1    LJIG01015987    KRT81953.1    GECU01005011    JAT02696.1    GECU01024218    JAS83488.1    GECU01006573    JAT01134.1    GECU01003872    JAT03835.1    GBBI01000359    JAC18353.1    AAAB01008984    APCN01003776    CH477230    EAT46959.1    ATLV01022565    KE525333    KFB47798.1    GGFJ01000742    MBW49883.1    AXCM01002215    AXCN02000831    GGFJ01000740    MBW49881.1    GGFJ01000741    MBW49882.1    GGFM01001362    MBW22113.1    GGFK01003670    MBW36991.1    GGFJ01000675    MBW49816.1    GGFL01000564    MBW64742.1    GGFL01000638    MBW64816.1    GGFM01006661    MBW27412.1    GGFK01003509    MBW36830.1    GGFK01003475    MBW36796.1    GGFK01003510    MBW36831.1    GFTR01007273    JAW09153.1    GGFM01006659    MBW27410.1    EAA14734.4    DS235851    EEB18715.1    GDHC01002124    JAQ16505.1    ADMH02001051    ETN64307.1    GFDL01011953    JAV23092.1    GEDC01013129    JAS24169.1    GFDL01012032    JAV23013.1    GFDL01011935    JAV23110.1    GEDC01030493    JAS06805.1    GEDC01015856    JAS21442.1    GFDL01011657    JAV23388.1    KK856858    PTY26488.1    UFQT01000225    SSX22042.1    GFXV01004318    MBW16123.1    GBYB01001565    GBYB01001566    JAG71332.1    JAG71333.1    GEZM01073290    JAV65182.1    DS232952    EDS26990.1    CH954177    EDV58945.2    KQS70583.1    KQS70585.1    GANO01004286    JAB55585.1    GGMR01012268    MBY24887.1    KQS70582.1    KQS70584.1    CM000157    EDW88026.2    KRJ97526.1    KRJ97529.1    JXJN01020305    AK417952    BAN21167.1    CM002910    KMY89668.1    KMY89670.1    KMY89671.1    AE014134    AAN10770.2    AAN10771.2    ACZ94234.1    ABLF02027168    ABLF02027174    CH902620    KPU73947.1    KPU73948.1    KRJ97527.1    KRJ97528.1    GL762326    EFZ21685.1    KPU73946.1    BT001555    AAN71310.1    AAF53045.2    ACZ94233.1    KMY89669.1    KMY89672.1    EDV32451.2    AFH03642.1    AFH03645.1    AFH03647.1    KQ414784    KOC61042.1    KPU73949.1    CCAG010010711   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000027135    UP000235965    + More
UP000007266    UP000069940    UP000249989    UP000076407    UP000075840    UP000008820    UP000075882    UP000030765    UP000075903    UP000075884    UP000075883    UP000075886    UP000075881    UP000075885    UP000075902    UP000007062    UP000075920    UP000075880    UP000069272    UP000009046    UP000076408    UP000000673    UP000075900    UP000095301    UP000192221    UP000002320    UP000079169    UP000008711    UP000002282    UP000092443    UP000092460    UP000000803    UP000007819    UP000007801    UP000092445    UP000053825    UP000092444   

PRIDE

H9JKY1    Q8IPB2    Q8IGW4    Q9VKL9   

Pfam

PF03133   TTL

Interpro

IPR013815   ATP_grasp_subdomain_1        + More
IPR004344   TTL/TTLL_fam       
IPR027748   TTLL-4       
IPR017896   4Fe4S_Fe-S-bd       

Gene 3D

3.30.1490.20    

ProteinModelPortal

H9JKY1   A0A2A4K4M1   A0A2H1VEH2   A0A194Q5V0   A0A194QTB7   A0A067R8J0   + More
A0A2J7QZV7   A0A2J7QZW0   A0A2J7QZV6   A0A2J7QZW5   D6WYE8   A0A023EWR9   A0A182GJL8   A0A0T6B3W8   A0A1B6JU11   A0A1B6I987   A0A1B6JQF2   A0A1B6JXA3   A0A182WYN1   A0A023FBQ1   A0A1S4H082   A0A182I538   Q17JV3   A0A182KUI3   A0A084WC54   A0A182VAK4   A0A182NF19   A0A2M4BA23   A0A182MEP1   A0A182QQ02   A0A2M4BA66   A0A2M4BA54   A0A2M3Z0R9   A0A2M4A8B7   A0A2M4B9W0   A0A2M4CHA3   A0A2M4CHJ5   A0A2M3ZFV8   A0A2M4A7W0   A0A2M4A7L5   A0A2M4A7V4   A0A224XLX8   A0A182JZK4   A0A2M3ZG40   A0A182PFP2   A0A182UA81   Q7PVY2   A0A182WH41   A0A182INZ1   A0A182F2G2   E0VZA9   A0A182YCI6   A0A146MB87   W5JIV2   A0A1Q3F6A7   A0A1B6DER8   A0A1Q3F677   A0A1Q3F6B7   A0A182RIY8   A0A1B6C0P5   A0A1B6D6Y0   A0A1Q3F7C7   A0A1I8NC09   A0A2R7X3W7   A0A1I8NBY9   A0A1I8NBZ9   A0A1I8NBZ3   A0A336LVG9   A0A2H8TPL5   A0A0C9R429   A0A1Y1KUX1   A0A1W4VSP8   B0XFR1   A0A1S3CU55   B3N500   A0A1W4VST2   U5EQF5   A0A2S2P5Y8   A0A0Q5WAV4   B4P151   A0A1A9XV63   A0A1B0BTQ5   R4WTA1   A0A0J9R0J7   Q8IPB2   J9K688   A0A0P8XX36   A0A0R1DJQ7   A0A1S4E6M1   A0A1B0A5Y8   E9ICN0   A0A0P8ZGR4   Q8IGW4   Q9VKL9   A0A0J9R033   B3MJZ6   M9NEE5   A0A0L7QQY8   A0A0P8XGL7   A0A1B0FQW1  

PDB

4YLS     E-value=4.94084e-44,     Score=450

KEGG

101739701    K16601 tubulin polyglutamylase TTLL4 [EC:6.-.-.-] | (RefSeq) tubulin polyglutamylase TTLL4-like

GO

GO:0018095   GO:0005524   GO:0016874   GO:0042060   GO:0070735   GO:0018094   GO:0006464   GO:0006355   GO:0005007   GO:0008284   GO:0008543   GO:0016021   GO:0004672   GO:0048384  

PANTHER

PTHR12241:SF145  

Length:

597

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00697

Exp number, first 60 AAs:

0.00055

Total prob of N-in:

0.00128

outside

1  -  597

 

 

Pi

269.489125

Theta

177.529887

Tajima's D

1.129385

CLR

0.521686

CSRT

0.701814909254537

Interpretation

Uncertain