Gene

KWMTBOMO03836

Pre Gene Modal

BGIBMGA010002

Annotation

PREDICTED:_rho_GTPase-activating_protein_7_[Bombyx_mori]

Location

Bomo_Chr7(-):3662687-3744579      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.459

CDS

ATGAAACTAGAGCACCACCATCATCAGAAGAGATCGAACGACTCTGACGATGAGCAATGCGCGCTGAGTGATAAATGGCAGTACGAGAGAAAGTCTAGAAGGTGGTCAAGAGTCGTCGAAATCACCCCACAAGCTCAAAGAAGATTACAGGTGATAGCAGCAAGAGCTCTAGCTGAGCGCGAAGCAAGAGAAGCCAGAGGTGAAGTGGAAGATGATGAAGACGAGACTCTGCCCACCATCAGGGTGGGACTGGTGGACGCAGATGGACATTACACTGACGTTGAGCCGGATCTTTTAAACATTCCTGGTCAACCAGTAATTCAGTTACCAAGCGACAAAGAAGATGAAGAAGAAACGGGTACCCGTTTCCGAAGGACCGGCTCGGAAAGACTACGCGATGGAGCCAAAGCATTGCTTCGTAGAGTTGAATCACTTAAGACTAGGAGAAGAAAACGCCAAAACAGAACCGAAGTTATCGTATCTTCGCCCCACTTTCTAGATGTACAAACCGACCAGTACCCAGATCTGAATTATATTGATATGACACCGACCTCGCCAACAGCATTCCCGTTCCCAGATTTCCATAGTTCACCAGCACACGCTGGTATCCGAACTCAGCCCCCTTCTCCTATGACCATAATGCCTCCATCACCGATAGCTCCTCTAGAACAATCCTTCGTCCTGAACCCTCCGTTCGGTGATGACAGTTCTTCATACGCGTCAGATGGCAGCATGAGTTCTAGTAACAAGAGCTCCAAGTCGAAACTCGGCCGAGCCAAAAGGATATTTAACAGAGGGCTCAAGAATGATGATTCAAGTGCTTTAAGTGATTCAGAATGTCAGCCGGCTAGTTGGAGACATAATTATTACAAAGAAATCAACACCCACAACACTGAGGTATATGTTGAACCACCATCACCGGTAGAGCTAAAAGCGGATCCTGAAATATTGCGGGAAGTACAAAAATCTCCAGGGCACACTCCACATAGGCGACAAGCAATAAGGACGAGTTCATTAAACCTAGGAAAGGAAGGACAAAAATTCCGCGACAGAAGTCTGAAAAGGGACAAATCTGCATCAAGGAGCTCTGAGCTTGATAGCAGTCCAAATTCTGCGGGTTCCAGGTCTCATGATGGCGATCAAGACGATGACGATGATAGCCTCGATCTGAAGAGTAAAAAGAGCAGTATACAAAGATGGTATTCCTTCCGTACTGGTGCCCTAAATGGAGGACCGAAAGCCAACAATACTCTTCAGCCTGCACCGAATCAAAAAGACCCTGACTCATACTTATCGCGACCAATGGCTTCATTATCCTGCGGACAATTACATATCTTGAGGAAGCTGGCTCTTCTAAGATTAACCGCCTGCATGGAGAGATACTGCCCATCACATAAATCCGGCTGGAATTGGGAGCTACCGAAACTTATACGGAAAATCAAAACTCCTGATTATAAAGATAAAACAGTATTTGGTGTACCCCTAACTGTGTCACTGCAAAGGACTGGTCACGCACTCCCCAAACCGATCCAGTGTGCTTTGAACTGGCTGAAAACCAATGCATTAGATCAGATGGGCATATTCAGGAAGGCCGGAGTAAAATCAAGGATTGCGAAACTTCGTAGCGTTGTCGAAGCAGCCGGTGCAGCTAATGCCGCATTCGCTATAGAGAACATGAACACCATCGATCAGAACCAGTCAAGCTTGAACTTCGACGGCGCTCAGGCTCATGACGTTGCGGACATGGTTAAGCAATACTTCAGAGAACTACCCGATGCATTACTCACAAATAAACTCAGCGAAACTTTTATTGCTATTTTTCAACATGTCCCTGAACCTCTTCGTCCTGATGCAGTGCAATGTGCATTACTACTGCTACCCGAAGAGCACTTGGAGGCTTTGCATTCACTACTCATATTTCTTTCTGACGTAGCCGAACATTCCGCGGTGAATCAAATGACAGCATCGAATTTGGCTGTTTGTCTGGCACCAACGTTACTGAGGCTGCATCACGCTCCACCGCAGACTGGGAGCACTAAAGAAGGGAATTCTAACAGGATGGTGATAGAAAGCGTAGCGGATCAAAGGCAGATCAGCGAAAGCCGGGCAGCCCACGCTTGTTTACTACTATTGATACAGAAACACATGCAATTATTTCTGGCTCCAGCTGACATGCTGGCCAGATGCAAATTCAACTACTTCGAAGAGAGTGTGCCGGTGTCATTAGAAGAATTGGGAGCTGATTTCAATCAAGACTGGAAAGGTTTTCAGCAGGCCTGCATCAAAGCTTTAATCAAAGAAGCCAAAGAAAAAACGAGAGGATGGATGTCAGTTTCTGGTGCGGCGCCGCATGTGGAACTCTGCTGTAAGAAAGTGGGAGACGGTCATCCACTCAGATTGTGGAGGGCGACTACAGACGTGGAAGCCCCGCCACAGGAGGTAGTTCAAAGAATCCTCCGCGAGCGGCATATTTGGGATGATTCGCTGGTGAAGTGGAGGATTGCAGAAAAACTTGGTGCCAACGCCGAAGTGTTTCAATACGTATCGGCTTCCTGCATCAATCTTCCGCCGCGGGAGTACTGCGTTTTGCGGTCGTGGCAGCAAAGCAGTGGTGGGAGCGGCAGCGGGGGTGGGGGCGGGGGCGGGTGGTGCGCCGTGGCGGAGACGTCGGTGGCGCACGGCGCGGCGCCGGCGTGCGGCCCGCGCGGCGTGGTGCTCGCCTCCCGGTACCTCGCGCAGCCGGCCGGCAAGGGGCGCAGCCGCCTCGTGCACCTGGCCAGGGTCGACACCATGGGTCGAACGCCAGAATGGTACAATAAATGCTACGGGCACATCTGCGCCCTGTACTTGGCCAGGATTCGAGCCTCGTTCAAGCACAACACGGAAGGCCCGGAATCCAACGTATGA

Protein

MKLEHHHHQKRSNDSDDEQCALSDKWQYERKSRRWSRVVEITPQAQRRLQVIAARALAEREAREARGEVEDDEDETLPTIRVGLVDADGHYTDVEPDLLNIPGQPVIQLPSDKEDEEETGTRFRRTGSERLRDGAKALLRRVESLKTRRRKRQNRTEVIVSSPHFLDVQTDQYPDLNYIDMTPTSPTAFPFPDFHSSPAHAGIRTQPPSPMTIMPPSPIAPLEQSFVLNPPFGDDSSSYASDGSMSSSNKSSKSKLGRAKRIFNRGLKNDDSSALSDSECQPASWRHNYYKEINTHNTEVYVEPPSPVELKADPEILREVQKSPGHTPHRRQAIRTSSLNLGKEGQKFRDRSLKRDKSASRSSELDSSPNSAGSRSHDGDQDDDDDSLDLKSKKSSIQRWYSFRTGALNGGPKANNTLQPAPNQKDPDSYLSRPMASLSCGQLHILRKLALLRLTACMERYCPSHKSGWNWELPKLIRKIKTPDYKDKTVFGVPLTVSLQRTGHALPKPIQCALNWLKTNALDQMGIFRKAGVKSRIAKLRSVVEAAGAANAAFAIENMNTIDQNQSSLNFDGAQAHDVADMVKQYFRELPDALLTNKLSETFIAIFQHVPEPLRPDAVQCALLLLPEEHLEALHSLLIFLSDVAEHSAVNQMTASNLAVCLAPTLLRLHHAPPQTGSTKEGNSNRMVIESVADQRQISESRAAHACLLLLIQKHMQLFLAPADMLARCKFNYFEESVPVSLEELGADFNQDWKGFQQACIKALIKEAKEKTRGWMSVSGAAPHVELCCKKVGDGHPLRLWRATTDVEAPPQEVVQRILRERHIWDDSLVKWRIAEKLGANAEVFQYVSASCINLPPREYCVLRSWQQSSGGSGSGGGGGGGWCAVAETSVAHGAAPACGPRGVVLASRYLAQPAGKGRSRLVHLARVDTMGRTPEWYNKCYGHICALYLARIRASFKHNTEGPESNV

Uniprot

A0A2A4JG32   A0A2H1W8Z7   A0A212FJT3   A0A194PZP2   A0A194R9G0   A0A2A4JHI2   + More
H9JKF1   E9I8Y7   A0A158NJR5   A0A195BFN7   A0A195C8F3   A0A195F243   A0A151WJA7   A0A3L8DVB6   F4X3X9   A0A2J7RTI3   A0A2J7RTI7   A0A026WPT9   A0A195EKP6   A0A0C9RRR6   K7IZK0   A0A310SPY5   A0A2A3EPY6   A0A088A7P6   A0A232FMY5   E0VX09   A0A154P9C2   A0A1L8DL91   A0A1L8DL04   A0A1B0CDI4   A0A1B6J9H9   A0A0J7L738   A0A1B6E836   A0A0C9R3I9   A0A1B6EBR3   A0A224XGN9   A0A0P4VHB2   A0A1L8DL93   Q297U8   B4HEN4   Q9VFK2   B3P0Q5   B4LY65   B4QZV4   Q8SY28   B4PST6   A0A1W4US81   B3LVG1   A0A3B0JIW8   B0W210   A0A182GUA4   A8WHF8   A0A0R3NHI5   A0A0Q9WNS7   A8JR05   A0A0R1E424   A0A1W4V4I9   A0A0N8P181   A0A0P8XWW0   A0A1J1HL51   A0A1Q3G475   A0A1Q3G469   Q17FX7   W8AV38   W8AR15   W8AJ15   W8BFR5   A0A0L0BKW0   A0A0K8V161   A0A0K8V6V7   A0A0A1XKZ3   A0A0K8UWK8   A0A0K8VI39   A0A0A1XEQ4   B4JTT0   A0A1I8QD82   W8AR19   A0A034V721  

Pubmed

22118469    26354079    19121390    21282665    21347285    30249741    + More
21719571    24508170    20075255    28648823    20566863    27129103    15632085    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    26483478    18057021    17510324    24495485    26108605    25830018    25348373   

EMBL

NWSH01001501    PCG71045.1    ODYU01007102    SOQ49575.1    AGBW02008227    OWR53986.1    + More
KQ459582    KPI98791.1    KQ460597    KPJ13900.1    PCG71044.1    BABH01024929    BABH01024930    GL761662    EFZ22994.1    ADTU01017962    ADTU01017963    ADTU01017964    ADTU01017965    ADTU01017966    ADTU01017967    ADTU01017968    ADTU01017969    ADTU01017970    ADTU01017971    KQ976490    KYM83413.1    KQ978081    KYM97107.1    KQ981856    KYN34451.1    KQ983045    KYQ47897.1    QOIP01000003    RLU24430.1    GL888624    EGI58926.1    NEVH01000001    PNF44155.1    PNF44152.1    KK107139    EZA57666.1    KQ978782    KYN28444.1    GBYB01010071    JAG79838.1    KQ761164    OAD58101.1    KZ288203    PBC33332.1    NNAY01000007    OXU32096.1    DS235824    EEB17915.1    KQ434849    KZC08509.1    GFDF01006947    JAV07137.1    GFDF01006948    JAV07136.1    AJWK01007887    GECU01011917    JAS95789.1    LBMM01000424    KMQ98393.1    GEDC01003215    JAS34083.1    GBYB01002515    JAG72282.1    GEDC01001922    JAS35376.1    GFTR01008674    JAW07752.1    GDKW01003614    JAI52981.1    GFDF01006872    JAV07212.1    CM000070    EAL28107.1    CH480815    EDW42191.1    AE014297    BT044146    AAF55053.2    ACH92211.1    CH954181    EDV48881.1    CH940650    EDW67953.1    CM000364    EDX12952.1    AY075440    AAL68254.1    CM000160    EDW97582.1    CH902617    EDV41489.1    OUUW01000005    SPP80272.1    DS231824    EDS27446.1    JXUM01089191    KQ563752    KXJ73370.1    BT031104    ABX00726.1    KRT00462.1    KRF83574.1    KRF83575.1    ABW08670.1    ABW08671.1    KRK03845.1    KPU79188.1    KPU79189.1    KPU79187.1    KPU79190.1    CVRI01000006    CRK88132.1    GFDL01000442    JAV34603.1    GFDL01000448    JAV34597.1    CH477267    EAT45497.2    GAMC01018057    JAB88498.1    GAMC01018058    JAB88497.1    GAMC01018055    JAB88500.1    GAMC01018056    JAB88499.1    JRES01001706    KNC20687.1    GDHF01019723    JAI32591.1    GDHF01017647    JAI34667.1    GBXI01002675    JAD11617.1    GDHF01033799    GDHF01021401    GDHF01012625    JAI18515.1    JAI30913.1    JAI39689.1    GDHF01013745    JAI38569.1    GBXI01004886    JAD09406.1    CH916374    EDV91509.1    GAMC01018053    JAB88502.1    GAKP01021402    JAC37550.1   

Proteomes

UP000218220    UP000007151    UP000053268    UP000053240    UP000005204    UP000005205    + More
UP000078540    UP000078542    UP000078541    UP000075809    UP000279307    UP000007755    UP000235965    UP000053097    UP000078492    UP000002358    UP000242457    UP000005203    UP000215335    UP000009046    UP000076502    UP000092461    UP000036403    UP000001819    UP000001292    UP000000803    UP000008711    UP000008792    UP000000304    UP000002282    UP000192221    UP000007801    UP000268350    UP000002320    UP000069940    UP000249989    UP000183832    UP000008820    UP000037069    UP000001070    UP000095300   

PRIDE

H9JKF1    Q9VFK2    Q8SY28    A8JR05   

Pfam

PF00620   RhoGAP        + More
PF01852   START

Interpro

IPR002913   START_lipid-bd_dom        + More
IPR013761   SAM/pointed_sf       
IPR023393   START-like_dom_sf       
IPR000198   RhoGAP_dom       
IPR008936   Rho_GTPase_activation_prot       

SUPFAM

SSF48350   SSF48350        + More
SSF47769   SSF47769       

Gene 3D

1.10.555.10     3.30.530.20    

ProteinModelPortal

A0A2A4JG32   A0A2H1W8Z7   A0A212FJT3   A0A194PZP2   A0A194R9G0   A0A2A4JHI2   + More
H9JKF1   E9I8Y7   A0A158NJR5   A0A195BFN7   A0A195C8F3   A0A195F243   A0A151WJA7   A0A3L8DVB6   F4X3X9   A0A2J7RTI3   A0A2J7RTI7   A0A026WPT9   A0A195EKP6   A0A0C9RRR6   K7IZK0   A0A310SPY5   A0A2A3EPY6   A0A088A7P6   A0A232FMY5   E0VX09   A0A154P9C2   A0A1L8DL91   A0A1L8DL04   A0A1B0CDI4   A0A1B6J9H9   A0A0J7L738   A0A1B6E836   A0A0C9R3I9   A0A1B6EBR3   A0A224XGN9   A0A0P4VHB2   A0A1L8DL93   Q297U8   B4HEN4   Q9VFK2   B3P0Q5   B4LY65   B4QZV4   Q8SY28   B4PST6   A0A1W4US81   B3LVG1   A0A3B0JIW8   B0W210   A0A182GUA4   A8WHF8   A0A0R3NHI5   A0A0Q9WNS7   A8JR05   A0A0R1E424   A0A1W4V4I9   A0A0N8P181   A0A0P8XWW0   A0A1J1HL51   A0A1Q3G475   A0A1Q3G469   Q17FX7   W8AV38   W8AR15   W8AJ15   W8BFR5   A0A0L0BKW0   A0A0K8V161   A0A0K8V6V7   A0A0A1XKZ3   A0A0K8UWK8   A0A0K8VI39   A0A0A1XEQ4   B4JTT0   A0A1I8QD82   W8AR19   A0A034V721  

PDB

2PSO     E-value=1.1967e-48,     Score=491

KEGG

101737427    K20632 deleted in liver cancer protein | (RefSeq) rho GTPase-activating protein 7

GO

GO:0008289   GO:0007165   GO:0016021   GO:0007494   GO:0035024   GO:0007391   GO:0000902   GO:0035277   GO:0048814   GO:0008258   GO:0000912   GO:0030866   GO:0005938   GO:0051653   GO:0008586   GO:0007091   GO:0007274   GO:0007052   GO:0005096   GO:0000132   GO:0035160   GO:0007266   GO:0016323   GO:0007443   GO:0007424   GO:0030431   GO:0050806   GO:0035202   GO:0006468   GO:0005007   GO:0005524   GO:0008284   GO:0008543   GO:0004672   GO:0048384  

Length:

968

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00215

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00002

outside

1  -  968

 

 

Pi

224.739045

Theta

183.887266

Tajima's D

0.831215

CLR

0.450834

CSRT

0.612919354032298

Interpretation

Uncertain