SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03828
Pre Gene Modal
BGIBMGA010006
Annotation
putative_Ser/Thr-like_protein_kinase_lyk4_[Danaus_plexippus]
Location in the cell
Nuclear   Reliability : 3.758
 

Sequence

CDS
ATGGACCAAGAAAGGCCTGAAACCAGTAGAAATGGAAAGAGGACACGACCTTTGCTTTCAGAGCCGAGTGAGAAGATATCTAGGATGTGTTCGTACTTAGACTACGCTTCCCGTGTATCAAAACCTAGTGGTGTATTAAAGAATTCAAAAAAGGTGGCACCTTGTTCTGCAAAACGGCCTAAGTTACCTTATAATGAAAGTGATGTTCCTCCTGCGGGTACACTTGTTCCTGACAAGCACGTTAGGAAAGCCGGCCCATATTTATTGGGACCTAAATTAGGTCCTAGTCCTGTCAAAAGTATTGTTCAATGCCTAGCTAGGAAGGCAAAAACTGATGAGTTTTACCAGGTAAAAATATTGACATTAAGAAATGACGATCAACCAGAGACCCAGGATGATAGACAGGGAAAAATGCTCCTGCATACAGAGTATTCATTATTGTCACTATTGAAAGACCAGGAAGGTGTTATACATCATCATGGCTTATTTAAGGAATATGCACTAGAAGAAGTACCAAATCCGAATGGTCCAGGTTTCATATACACCGGAAAAGTCAGACAGAGGCTATTCTTAGTTTTGGACTGCGTAACACCTCACCAGTTCAGTGAGAAAGGTAGCGAACTGATAAACTTACAGCAATATGTTACTAAAGTTAGAAAAGTCCCCGAAAAAGAAGCAGTTCTGATATTCTACGATATTGTTAGAGTTGTCGCCAACCTTCATAAGAGGAACATTGTCCACCGAGATTTAAAACTCGGCAACATAGTGTTAAATCAAAGGACTGGACGGATAATAATAACAAACTTCTGTTTAGGAACTCATCTCGGTAGTGACAGAGATCTGTTGAAAGATCAGAGAGGTTCGCCAGCCTATATATCACCTGACGTTCTAATGTGCAAGCCGTATCTGGGCAAACCGTCGGACATGTGGGCACTGGGCGTCGTGCTCTACACTATGTTGTACGGACAGTTTCCTTTCTGCGACACGAGCCTAGCTCAATTATTCAGTAGGATACAGGCCGCCAACTATAATATACCACCAAATGGCAATTCGGTACAAGTATCACACAACACTGTATTTTTAATACAGAGGCTCCTAGTGAAAGATCCTAAGCACAGAATGGTTGCAGATGAAGTCCTCGATCAGCTTTCGAGCATCATAGCGAGTTACGTTACGATCTCCAACCCGCCCGAGGATCTGCAAGTGGTGCCGGATATTCCACTAGACGAGGAGACTAAAGAAAAAAGTAGTCAGTCGATCGAACTAGAGAAGAAACCATTCCTGACTGTACCGGAAAAAGGAGGCGAACGGACGCCCACTTCTGGTGACGAACTCGGCGTATATTGCGTCCCGCTGCCGGACTTCCTGGCCTTGAACTTCCCGTCGCCGACGCGCGTTCAGCAGAACAGTATCCTCATACATCCCACAGTCGAGGCGCCGCAACAGAGGCAGATAACGGTCCAGAGGATAGGCAGGGACGCCAGGCCGCTCCTGCCCTGCGAGATAGCCCGGTACCAGCACATGTTCGCTCCGAACCAGAGGAGGGAGACCCCCGCCCCGGAGTCCAGGCCGGACAACCCGAGGCCTCCGACGGCGGAAAATTCCAGACTGAGGCACTTAGCTCAGCGGATCCCCCGGCTCAACGCGGCCTCGCACTCCGCCGACCTCCGGGTCGTGCCGTGGTCCGACGCTTCGAGAAACAGGAGCTGGGATCCGGATTACTTCCCGCGCTCGCAGGTTCCAGAACATTCTAGAGTCCAAGCGAACGAAACCGGTAGCGTATCTAGACAAGAAGATGAATATTAA
Protein
MDQERPETSRNGKRTRPLLSEPSEKISRMCSYLDYASRVSKPSGVLKNSKKVAPCSAKRPKLPYNESDVPPAGTLVPDKHVRKAGPYLLGPKLGPSPVKSIVQCLARKAKTDEFYQVKILTLRNDDQPETQDDRQGKMLLHTEYSLLSLLKDQEGVIHHHGLFKEYALEEVPNPNGPGFIYTGKVRQRLFLVLDCVTPHQFSEKGSELINLQQYVTKVRKVPEKEAVLIFYDIVRVVANLHKRNIVHRDLKLGNIVLNQRTGRIIITNFCLGTHLGSDRDLLKDQRGSPAYISPDVLMCKPYLGKPSDMWALGVVLYTMLYGQFPFCDTSLAQLFSRIQAANYNIPPNGNSVQVSHNTVFLIQRLLVKDPKHRMVADEVLDQLSSIIASYVTISNPPEDLQVVPDIPLDEETKEKSSQSIELEKKPFLTVPEKGGERTPTSGDELGVYCVPLPDFLALNFPSPTRVQQNSILIHPTVEAPQQRQITVQRIGRDARPLLPCEIARYQHMFAPNQRRETPAPESRPDNPRPPTAENSRLRHLAQRIPRLNAASHSADLRVVPWSDASRNRSWDPDYFPRSQVPEHSRVQANETGSVSRQEDEY

Summary

Pfam
PF00069   Pkinase        + More
PF09335   SNARE_assoc
Interpro
IPR011009   Kinase-like_dom_sf        + More
IPR024104   Tribbles/Ser_Thr_kinase_40       
IPR008271   Ser/Thr_kinase_AS       
IPR000719   Prot_kinase_dom       
IPR024236   Ser/Thr_kinase_40       
IPR032816   SNARE_assoc       
SUPFAM
SSF56112   SSF56112       

Ontologies

Topology

Length:
601
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.20818
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00986
outside
1  -  601
 
 

Population Genetic Test Statistics

Pi
18.28914
Theta
24.531376
Tajima's D
-1.274563
CLR
210.921206
CSRT
0.0955452227388631
Interpretation
Uncertain
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