SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03824
Annotation
_gustatory_receptor_17_[Bombyx_mori]
Full name
Gustatory receptor      
Location in the cell
PlasmaMembrane   Reliability : 2.833
 

Sequence

CDS
ATGAGTATAATATACATTACGAACATACAATCACTGGCGCTGATGTTTGCACCGGCTTTAACGGCTGGATTCCTCCCATCGTTGACGATGAAAATGAGGATAATTTTACATGACAAACTATTGGAAGAACAAGATAAAAAAACGTATCGCCACATCGTGCTTTTCATCAAATATATCGAAACTTGCCCCTTGAAGTTAAAGGCGTGTCAGATAATACCTTTAGATTTCAGTTTCCCGATAATTATCCTTAATATAGTGGTGACATATTTGATTGTGGCCATACAGCTCACGCATTTTTTGTAG
Protein
MSIIYITNIQSLALMFAPALTAGFLPSLTMKMRIILHDKLLEEQDKKTYRHIVLFIKYIETCPLKLKACQIIPLDFSFPIIILNIVVTYLIVAIQLTHFL

Summary

Description
Gustatory receptor which mediates acceptance or avoidance behavior, depending on its substrates.
Similarity
Belongs to the insect chemoreceptor superfamily. Gustatory receptor (GR) family.
Pfam
PF08395   7tm_7
Interpro
IPR013604   7TM_chemorcpt       

Ontologies

Topology

Subcellular location
Cell membrane  
Length:
100
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
43.30991
Exp number, first 60 AAs:
21.11124
Total prob of N-in:
0.35820
POSSIBLE N-term signal
sequence
outside
1  -  3
TMhelix
4  -  26
inside
27  -  75
TMhelix
76  -  98
outside
99  -  100
 
 

Population Genetic Test Statistics

Pi
216.651631
Theta
166.031997
Tajima's D
0.958884
CLR
0
CSRT
0.648817559122044
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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